| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,149,807 | T→A | 5.7% | intergenic (‑1991/‑1183) | PP_5393 ← / → PP_5395 | metal‑binding chaperone/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,149,807 | 0 | T | A | 5.7% | 272.7 / 4.5 | 87 | intergenic (‑1991/‑1183) | PP_5393/PP_5395 | metal‑binding chaperone/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (36/46); new base A (2/3); total (38/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
TATCTTCCTCCTGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGCGATTACGAATCGATG > NC_002947/6149659‑6149955 | tatCTTCCTCCTGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGTGCCTTGAGCTCGAGCATTTGGCCGCGCAACGTTAATGAGATAATGACTGCAGCCGCt > 5:386790/1‑149 (MQ=255)tatCTTCCTCCTGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGTGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCt > 5:392058/1‑149 (MQ=255)tatCTTCCTCCTGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCt > 2:167943/1‑149 (MQ=255) tcctccTGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCg > 1:104022/1‑147 (MQ=255) tcctccTGACCATCGGCCCCGATGCGACGGGCCGTCTTCGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCg > 4:72372/1‑147 (MQ=255) cctcctGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTc < 7:203477/145‑1 (MQ=255) cctcctGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGa < 2:337001/147‑1 (MQ=255) tcctGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAg > 1:175143/1‑147 (MQ=255) tcctGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAg > 3:39318/1‑147 (MQ=255) tcctGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAg > 3:128160/1‑147 (MQ=255) tcctGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAg > 2:100265/1‑147 (MQ=255) ctGACCATCGTCCCCGATGCGACGGGCCGTATTGGGGGCAAGGCCCAGGAGCGACTGGCTGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTa < 8:82840/147‑1 (MQ=255) ccATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTcc < 6:166003/149‑1 (MQ=255) aTCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGa > 7:298250/1‑149 (MQ=255) aTCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGa > 5:261336/1‑149 (MQ=255) tCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGAt > 6:158251/1‑149 (MQ=255) ggCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGc < 3:182964/149‑1 (MQ=255) gCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCg > 6:352494/1‑149 (MQ=255) ccccGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCATCGGAGTCTACTTCGAAGCgg < 2:268852/149‑1 (MQ=255) cGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCa > 3:224020/1‑149 (MQ=255) gATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCATCGGAGTCTACTTCGAAGCgg < 5:380366/145‑1 (MQ=255) gATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCATCGGAGTCTACTTCGAAGCgg > 6:380366/1‑145 (MQ=255) cGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTg < 2:104022/149‑1 (MQ=255) gACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTg > 2:293192/1‑148 (MQ=255) gACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGc < 2:27907/149‑1 (MQ=255) gCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGa > 5:147084/1‑148 (MQ=255) ccGTCTTGGGGGCAAGGCCCAGTAGCGACTTGATGGCGTCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGaaa < 4:241549/149‑1 (MQ=255) ccGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGCGCAACGTTAATGAGATAATGACTGCCGCGGCTTCGAAGTAGACTCCGATGGGGCCCTCCTGGATgc > 3:300647/1‑146 (MQ=255) ccGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGaaa < 5:323650/149‑1 (MQ=255) ccGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGaaa > 5:359218/1‑149 (MQ=255) ccGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGa > 8:237574/1‑147 (MQ=255) cGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAg < 1:193193/149‑1 (MQ=255) ggCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGAt < 1:196424/120‑1 (MQ=255) ggCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGAt > 2:196424/1‑120 (MQ=255) ggCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCggg > 2:142694/1‑148 (MQ=255) ggCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGa < 3:194198/149‑1 (MQ=255) ccAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGTGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGc < 6:386790/149‑1 (MQ=255) ccAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGTGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGc < 6:392058/149‑1 (MQ=255) ccAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGCGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGc < 4:63870/149‑1 (MQ=255) ccAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGc < 1:167943/149‑1 (MQ=255) ccAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGc < 4:39318/149‑1 (MQ=255) ggAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCgg > 5:283284/1‑148 (MQ=255) aGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGaa < 5:158251/149‑1 (MQ=255) aGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGaa < 7:196468/149‑1 (MQ=255) aCTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACt > 5:135617/1‑149 (MQ=255) cTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACtg > 5:341822/1‑149 (MQ=255) ttGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACtgt > 3:103066/1‑149 (MQ=255) ttGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACtgt > 6:144173/1‑149 (MQ=255) aTGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTgg < 8:298250/148‑1 (MQ=255) tGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGcc > 6:335802/1‑149 (MQ=255) gcggcgGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCg < 7:237574/148‑1 (MQ=255) gcggcgGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCg < 6:261336/148‑1 (MQ=255) ggcggAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCaa > 1:207141/1‑149 (MQ=255) ggcggAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCaa < 6:147084/149‑1 (MQ=255) ggcggAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGCCACAGTGTTCCCGCag < 4:1730/149‑2 (MQ=255) gAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCt < 5:352494/149‑1 (MQ=255) gTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGta > 7:86570/1‑149 (MQ=255) gTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGta < 4:128160/149‑1 (MQ=255) tttGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGtat < 1:142694/149‑1 (MQ=255) tgtgAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGtata < 1:100265/148‑1 (MQ=255) gtgAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAgg > 1:392139/1‑149 (MQ=255) gtgAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAg < 3:72372/148‑1 (MQ=255) gtgAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAg < 4:103066/148‑1 (MQ=255) tgAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAgg < 4:224020/148‑1 (MQ=255) tgAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGt < 1:293192/149‑1 (MQ=255) aGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTAc < 6:341822/149‑1 (MQ=255) gcCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTAcgccgc < 7:303640/149‑1 (MQ=255) gcCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTAcgccg > 1:202421/1‑148 (MQ=255) cTTGAGCTCGAGCATTTGGCCGAGCAACGTAAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAg < 8:157632/149‑1 (MQ=255) gCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTa > 5:365196/1‑149 (MQ=255) cTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTAc < 6:76849/149‑1 (MQ=255) gCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCaaa < 6:136506/149‑1 (MQ=255) gCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCaaa < 2:202421/149‑1 (MQ=255) aTTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGta < 6:257976/122‑1 (MQ=255) aTTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGta > 5:257976/1‑122 (MQ=255) gCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTAt > 8:222846/1‑147 (MQ=255) aCGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCca > 2:267095/1‑148 (MQ=255) gTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACat < 2:207141/149‑1 (MQ=255) tGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCAGATGCCGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCTGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCg > 4:283244/1‑149 (MQ=255) agaTAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCgg < 6:135617/148‑1 (MQ=255) aaTGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAACCCTAGCAGCGTCCACATATTCGGGGTGc > 2:206582/1‑149 (MQ=255) aTGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGc > 7:132527/1‑148 (MQ=255) aTGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGc > 7:309105/1‑148 (MQ=255) aCTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGCGAtt < 2:175143/149‑1 (MQ=255) tggCCGCATCGGAGTCTACTTCGAAGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGc < 3:76583/139‑1 (MQ=255) tggCCGCATCGGAGTCTACTTCGAAGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGc > 4:76583/3‑141 (MQ=255) cAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGCGATTACg < 6:365196/148‑1 (MQ=255) gCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGCGATTACGAAt < 8:309105/149‑1 (MQ=255) cTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGCGATTACGAATCGAt < 8:132527/149‑1 (MQ=255) cTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGCGATTACGAATCGAt < 1:267095/149‑1 (MQ=255) ttCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGCGATTACGAATCGATg > 5:360654/1‑149 (MQ=255) ttCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGCGATTACGAATCGATg > 5:366597/1‑149 (MQ=255) | TATCTTCCTCCTGACCATCGGCCCCGATGCGACGGGCCGTCTTGGGGGCAAGGCCCAGGAGCGACTTGATGGCGGCGGAGGTTTGTGAGCGCGCCTTGAGCTCGAGCATTTGGCCGAGCAACGTTAATGAGATAATGACTGCAGCCGCTTCGAAGTAGACTCCGATGCGGCCATCCTGCATGAAAGTCGTCGGGAAAACCTGCGGGAACACTGTGGCCGCAACGCTGTATAGGTACGCCGCAGCCGTACCCAAACCTATCAGCGTCCACATATTCGGGCTGCGATTACGAATCGATG > NC_002947/6149659‑6149955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |