| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,158,985 | C→G | 5.7% | intergenic (+322/+546) | PP_5739 → / ← PP_5402 | hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,158,985 | 0 | C | G | 5.7% | 274.9 / 4.4 | 88 | intergenic (+322/+546) | PP_5739/PP_5402 | hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit |
| Reads supporting (aligned to +/- strand): ref base C (37/43); new base G (2/3); total (40/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-01 | |||||||||||
AAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTC > NC_002947/6158844‑6159130 | aaGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAggcgg > 2:180755/1‑149 (MQ=255) tCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑ttttt > 2:263108/1‑149 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCTTGAGAGGGCGGC‑ttttta < 2:111880/148‑2 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑ttttttt < 7:283213/149‑1 (MQ=255) ttCGCTTTAGCGGCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAATCCGCCCTCTAAAGGCGGC‑TTTTTTTTGc > 7:299322/1‑149 (MQ=255) tCGCTTTAGCGGCAAAATTATTCGTTTGG‑TTGCGGCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACGGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGc < 5:293530/148‑1 (MQ=255) cTTTAGCGGCTAAATTTTTCGTTTGGATTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTc > 1:4910/1‑149 (MQ=255) cTTTAGCGGCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGATATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGTCGGC‑TTTTTTTTGCCTCg > 2:337113/1‑149 (MQ=255) gCGGCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTc < 6:54934/149‑1 (MQ=255) ggCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCg > 6:119140/1‑148 (MQ=255) ggCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCATCAACGTTCGCATGTTTCAGTACGTCGCCGACGAACGTCTCAATTCGTTGTCTAAAAAACCGCCCTCTCAACGCGGC‑TTTTTTTTGGCTCGGATTCg > 1:327980/1‑148 (MQ=255) gCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTa > 6:274693/1‑149 (MQ=255) cTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTAt < 3:94190/149‑1 (MQ=255) cTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTAt < 5:43813/149‑1 (MQ=255) aaTTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAGGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCgg > 3:84989/1‑149 (MQ=255) aaTTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATc < 7:51772/147‑1 (MQ=255) aaTTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCg < 6:115208/148‑1 (MQ=255) aaTTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCg < 3:301693/148‑1 (MQ=255) gTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACcgtcg > 4:200526/1‑149 (MQ=255) ttGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGtg > 4:288855/1‑149 (MQ=255) tGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGtg < 5:307158/148‑1 (MQ=255) gTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTc < 3:361487/124‑1 (MQ=255) gTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTc > 4:361487/1‑124 (MQ=255) gTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGACGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAgt > 1:305549/1‑149 (MQ=255) ttaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCg > 5:194203/1‑149 (MQ=255) aattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGAAGACGAACATCTCAATTCGTTTGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCATCGGATTCGTATCGGTACCGTCGTGATGCCAGTGTCGc > 3:36629/1‑148 (MQ=255) taTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGa > 7:211076/1‑148 (MQ=255) aTTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACtt < 2:290415/148‑1 (MQ=255) cTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAGGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACt < 4:84989/149‑1 (MQ=255) cTATAGTACTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACt < 2:301202/149‑1 (MQ=255) tataGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtg > 6:167053/1‑149 (MQ=255) tataGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtg > 4:198898/1‑149 (MQ=255) tataGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACAGTCGTGCTGCCAGAGTCGCCGAACATGATCACtg > 6:127189/1‑149 (MQ=255) taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt < 1:332132/148‑1 (MQ=255) taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑‑TTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt < 1:358726/147‑1 (MQ=255) gTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCTGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGa < 3:117809/148‑1 (MQ=255) gTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGa < 2:2227/148‑1 (MQ=255) gTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTCGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAg > 2:14089/1‑149 (MQ=255) tCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCAGAACTTGATCACTGTGAGGAc > 7:349278/1‑148 (MQ=255) accGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCCATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAg < 2:305549/147‑1 (MQ=255) aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCa < 1:106427/117‑1 (MQ=255) aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCa > 2:106427/1‑117 (MQ=255) aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCa < 5:274693/148‑1 (MQ=255) aCGTTCGACTTTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGa < 4:36629/149‑1 (MQ=255) aCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGa < 3:200526/149‑1 (MQ=255) ttCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTa < 1:180755/149‑1 (MQ=255) gACTGTTTCGGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATc < 8:25/148‑1 (MQ=255) gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGa > 3:23335/1‑135 (MQ=255) gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGa < 4:23335/135‑1 (MQ=255) gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCa < 1:186923/149‑1 (MQ=255) gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCa < 2:69134/149‑1 (MQ=255) tttCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑‑TTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtg > 1:121688/1‑126 (MQ=255) tttCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑‑TTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtg < 2:121688/126‑1 (MQ=255) tCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTa > 5:250273/1‑148 (MQ=255) aGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTac > 1:148402/1‑147 (MQ=255) aGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTac < 2:148402/147‑1 (MQ=255) cGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAacca > 4:227180/1‑149 (MQ=255) gCCGACGAACCTCTCAATTCTTTGGCTAAAAAGCCGCCCTCTAAAGGCGGC‑TTTTTTTTGCCTCTGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAaccac < 3:201825/149‑1 (MQ=255) cgacgaACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGCTTATCATGAGTACACTCAACCCCCt > 6:21472/1‑149 (MQ=255) gacgaACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCTGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtg < 1:105396/149‑1 (MQ=255) gacgaACCTCTCAATTCGTCGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtg < 1:14089/149‑1 (MQ=255) gaACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTTTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGa < 8:299322/149‑1 (MQ=255) aaCCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGAc < 3:288855/149‑1 (MQ=255) ctctCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGt > 1:341725/1‑149 (MQ=255) tcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACCCAACCACCTGTGACTGtt < 5:119140/147‑1 (MQ=255) cAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCAt > 5:55416/1‑119 (MQ=255) cAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCAt < 6:55416/119‑1 (MQ=255) aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGTC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTc < 7:263127/146‑1 (MQ=255) aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCg < 8:211076/147‑1 (MQ=255) aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc > 5:190315/1‑149 (MQ=255) ttCGTTGTCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCt > 5:245321/1‑149 (MQ=255) gcaaaaaaaaGCCGCCTTGAGAGGGCGGCTTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc < 5:88216/138‑1 (MQ=38) gcaaaaaaaaGCCGCCTTGAGAGGGCGGCTTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc > 6:88216/6‑143 (MQ=38) tcTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGc < 6:245321/147‑1 (MQ=255) gCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGAGAGGACCAGATTATCATGCGTAAACTCAACACCCTGTCACTGTTCGGCCTGTTGGc > 6:102997/1‑148 (MQ=255) ataacatgccggcCTCTAAAGGCTGC‑TTTTTTTTGCCTCGGATTCGTATCTGTACCTTCGTGCTGCGAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCaa < 5:127189/142‑1 (MQ=255) aaaGCCGCCTTGAGAGGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt < 6:297975/87‑1 (MQ=38) aaaGCCGCCTTGAGAGGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt > 5:297975/1‑87 (MQ=38) aaGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACg > 1:59167/1‑149 (MQ=255) aaGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACg > 1:93646/1‑149 (MQ=255) aGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGc < 6:190315/149‑1 (MQ=255) ccgccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCa < 1:263108/149‑1 (MQ=255) ccgccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCa < 8:349278/149‑1 (MQ=255) cgccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAg > 7:282824/1‑149 (MQ=255) gccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgt > 3:139697/1‑149 (MQ=255) gccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgt < 3:198898/149‑1 (MQ=255) cccTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtc < 5:102997/149‑1 (MQ=255) ccTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtcg > 2:194768/1‑149 (MQ=255) tcAAGGAGTC‑TTTTTTTTGCGTCGGATTCGTATCGGTACCGTCGTGCTGCCAGGTGCGCCGATCTTGATCACTGTGAGGAGCAGATTATCATGCGTACACTCAACAACCTGTGACTGTTCTGCCTGTTGGCAACCACGCCAgtcggc < 2:327980/147‑3 (MQ=255) | AAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGG‑TTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTC > NC_002947/6158844‑6159130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |