| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 503,831 | A→T | 12.8% | intergenic (+34/‑117) | PP_0414 → / → rpe | polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 503,831 | 0 | A | T | 12.8% | 203.2 / 17.5 | 78 | intergenic (+34/‑117) | PP_0414/rpe | polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase |
| Reads supporting (aligned to +/- strand): ref base A (30/38); new base T (3/7); total (33/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
CGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTCCAT > NC_002947/503685‑503976 | cGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTaaa < 7:57682/149‑1 (MQ=255) cATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCg < 3:176255/149‑1 (MQ=255) ttGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTC‑CGGCTTTAGCCgcg > 6:74417/1‑146 (MQ=255) gCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTTCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑Gaa < 3:209249/148‑1 (MQ=255) gCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTC‑CGGCTTTAGCCgcgaa < 6:217945/148‑5 (MQ=255) ccGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTACCTGTGC‑CGGCCTCTTC‑CGGCTTTAGCCGCGAag‑a < 5:23897/149‑1 (MQ=38) cgcgGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTACCTGTGC‑CGGCCTCTTC‑CGGCTTTAGCCGCGAag‑ag < 8:325381/149‑1 (MQ=38) cgcgGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTACCTGTGC‑CGGCCTCTTC‑CGGCTTTAGCCGCGAag‑ag < 6:30594/149‑1 (MQ=38) cggcggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCTGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGc < 7:50066/149‑1 (MQ=255) cggcggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTC‑CGGCTTTAGCCGCGAAG‑AGGc < 6:173165/149‑1 (MQ=39) cggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGTCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCgg < 2:250468/149‑1 (MQ=255) cggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCgg < 2:241917/149‑1 (MQ=255) cggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCgg < 2:229035/149‑1 (MQ=255) gACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGca > 6:250371/1‑147 (MQ=255) ccTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCg‑g < 2:136181/133‑1 (MQ=255) ccTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGCCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAgg > 1:134700/1‑149 (MQ=255) cTTGCTGATTGCGTTCTCGGTTTTTTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGTCTTGATGATGGCTTGCCTGTGC‑CGGCCTCTTC‑CGGCTTTAGCCGCGAAG‑AGGCCGGTACAggc < 5:378768/149‑2 (MQ=25) cTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGt < 4:222758/149‑1 (MQ=255) ttGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGtt > 2:38022/1‑149 (MQ=255) ttGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGtt > 5:252947/1‑149 (MQ=255) tcTGATTGCGTTCTCTGGGTTGTTGCTGATGACCCTGTTGGGGTGGCGTGGGCTTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATTATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCAAAAGCCG‑GAAG‑ATGCCGGCACAGGtt < 6:47808/146‑1 (MQ=255) ttGGGTTCTCGGTGTTGGTGCTGCTGACCCTGGAGTGGTGGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTg < 8:278820/148‑1 (MQ=255) ttGCTTTCTGGGTGTTGTTGCTGCTGACCGTGGAGTGGGTGCGTGGGCGTAGCGAGTAGCTGATGTGTCAACAGCCGGTTTGATGATGGCTTGCCTGTAC‑GGGTCTCTGCGCGGTTAAAGCGG‑GAAG‑AGGCCGGCACAGTTTGCGTTg < 2:134700/148‑1 (MQ=255) cGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTc < 7:162848/148‑1 (MQ=255) cGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTc < 3:190998/148‑1 (MQ=255) gTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGa > 2:60621/1‑149 (MQ=255) ttCTCGTTGGTGTTGCTGCTGACCCTGGCGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGac < 7:141407/149‑1 (MQ=255) ttCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAGCAGGCCGGCACAGGTTGCGTTGGTCGa < 1:4878/149‑1 (MQ=255) ggTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCaa > 7:305766/1‑149 (MQ=255) gtgtGGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACCGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAAt < 4:8303/149‑1 (MQ=255) tgttgtTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAAtt < 1:301661/149‑1 (MQ=255) gttgCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGAt > 2:353720/1‑148 (MQ=255) ttgCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATa < 8:305766/148‑1 (MQ=255) ttgCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATa < 6:233363/148‑1 (MQ=255) ctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATc < 5:250371/148‑1 (MQ=255) aCCCTGGAGTGGTTGCGTGGGCGTAGCGTGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGcc < 8:257272/149‑1 (MQ=255) cccTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGcc < 1:60621/148‑1 (MQ=255) ccTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCtt < 4:348592/149‑1 (MQ=255) cTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTGC‑CGGCCTCTTC‑CGGCTTTAGCCGCGAag‑a > 1:245391/1‑99 (MQ=25) cTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTGC‑CGGCCTCTTC‑CGGCTTTAGCCGCGAag‑a < 2:245391/99‑1 (MQ=25) tGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCa > 1:145396/1‑149 (MQ=255) gAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCAt < 1:353720/148‑1 (MQ=255) aGTGGTTGCGTGGGCGTAGTGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCg < 1:239260/149‑1 (MQ=255) aGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCg < 7:7315/149‑1 (MQ=255) aGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCg > 6:69992/1‑149 (MQ=255) gTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCt > 3:171758/1‑148 (MQ=255) tGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCg < 1:62092/139‑1 (MQ=255) tGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCg > 2:62092/1‑139 (MQ=255) tGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGa < 1:38022/149‑1 (MQ=255) gTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTa > 1:345988/1‑148 (MQ=255) gTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTa > 8:263086/1‑148 (MQ=255) gTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTAc < 5:69992/149‑1 (MQ=255) gTAGCGAGAAGCTGAGGACTCAACAGACGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTTATACCAATCAGCCTTCATCGCTTTCCCTGAGTTa > 6:82080/1‑148 (MQ=255) cGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATg > 1:24153/1‑149 (MQ=255) gagaAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATgc > 5:281168/1‑149 (MQ=255) gagaAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATgc > 1:51107/1‑149 (MQ=255) agaAGCTGAGGACTCATCTGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACTAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATgcg < 1:284018/149‑1 (MQ=255) agaAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACGCGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATgc > 1:85932/1‑149 (MQ=255) aGCTGATGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATgcgcgc < 6:39070/149‑1 (MQ=255) ggACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGt < 7:263086/149‑1 (MQ=255) tCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAAt > 7:50336/1‑149 (MQ=255) tCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAAt > 4:117288/1‑149 (MQ=255) aaCAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATgcgcgc < 8:10851/137‑1 (MQ=255) aaCAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATgcgcgc > 7:10851/1‑137 (MQ=255) aaCAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAAttt < 2:345988/149‑1 (MQ=255) aaCAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAAttt > 5:1994/1‑149 (MQ=255) atgatgGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCACTGAGTTACAATGCGAGCCACCCTGAATTTGCCAACAGGTgcg > 2:103600/1‑149 (MQ=255) gatgGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTGACAATGCGCGCCACCGTGAATTTGCCAACCGGTgcgc > 6:310753/1‑148 (MQ=255) ggCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACAGCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATg > 1:259964/1‑149 (MQ=255) cTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCa < 2:85932/149‑1 (MQ=255) gCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGcc > 4:86237/1‑149 (MQ=255) gCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGcc > 4:322667/1‑149 (MQ=255) cTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGccc > 3:160803/1‑148 (MQ=255) cTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCt < 4:171758/149‑1 (MQ=255) tctTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGcc > 1:103667/1‑149 (MQ=255) cgcgGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGccc < 2:24153/146‑1 (MQ=255) gcgGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTc > 5:380793/1‑149 (MQ=255) ccgGCTTTAGCCGCGAAG‑AGGCCGGTACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCt > 3:275329/2‑149 (MQ=255) gCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTCCAt < 2:145396/149‑1 (MQ=255) | CGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTAC‑CGGCCTCTTCGCGGCTAAAGCCG‑GAAG‑AGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTCCAT > NC_002947/503685‑503976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |