| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 516,693 | T→G | 5.5% | E100A (GAA→GCA) ‡ | PP_0429 ← | short‑chain dehydrogenase/reductase family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 516,693 | 0 | T | G | 5.5% | 229.6 / 4.0 | 73 | E100A (GAA→GCA) ‡ | PP_0429 | short‑chain dehydrogenase/reductase family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (34/35); new base G (2/2); total (36/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.00e-01 | |||||||||||
ATCCATGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGA > NC_002947/516546‑516837 | atccatGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCAtt > 5:352948/1‑148 (MQ=255)atccatGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCAtt > 3:149122/1‑148 (MQ=255) ccatGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCAt > 1:51545/1‑149 (MQ=255) ccatGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCAt > 7:51125/1‑149 (MQ=255) catGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCCTAGGCAGGTTACGGATGGCATGGCCCAGGCGGCGCAGGGCCAGCACGTTGACTGCCAGAAGAGCGTGTTCGACGGCCCAtt > 1:118018/1‑148 (MQ=255) catGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCACCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCAt < 5:255006/148‑1 (MQ=255) tGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTAATggg > 7:261228/1‑149 (MQ=255) ggCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGc < 4:35016/148‑1 (MQ=255) cAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATGAATGGGccgac < 8:130416/149‑4 (MQ=255) cAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATGAATGGGccgac < 2:37021/149‑4 (MQ=255) ccACCCCGGCCAGGCCGGCGACGTTGAGACTCTTCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTCCCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGc < 4:230824/149‑1 (MQ=255) cACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGcc > 6:378062/1‑149 (MQ=255) aCCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTAATGGGc > 7:143336/1‑137 (MQ=255) aCCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTAATGGGc < 8:143336/137‑1 (MQ=255) ccccGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCa < 4:236562/149‑1 (MQ=255) ccccGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCa < 6:352948/149‑1 (MQ=255) ccccGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCa < 8:202580/149‑1 (MQ=255) cccGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCa > 2:231842/1‑148 (MQ=255) ccGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATa < 2:51545/149‑1 (MQ=255) gCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGt < 6:148855/149‑1 (MQ=255) gTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCcgcg > 2:71052/1‑148 (MQ=255) ttGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCcgcg > 5:188301/1‑147 (MQ=255) tagaATCTGGCCGCCACCCTGTAGTGCCTT‑‑‑GAGGTTACCGATTGCATGGCAAAGGCGGCTCAGCGCTAGCACGTTGATTTCCACGAGATCCTGTTCTTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCTCAg < 8:261228/147‑1 (MQ=255) agaATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGtt > 5:171831/1‑149 (MQ=255) aaTCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGa > 6:109032/1‑149 (MQ=255) aaTCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGa < 6:171831/149‑1 (MQ=255) aTCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGAc < 2:118018/149‑1 (MQ=255) aTCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGAc < 2:123127/149‑1 (MQ=255) aTCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCCGCACAGGCTCAGCACTTAGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGa < 1:325248/148‑1 (MQ=255) tCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGAc > 3:110780/1‑148 (MQ=255) cGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCaa > 4:79213/1‑148 (MQ=255) ccTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGcc > 7:16536/1‑98 (MQ=255) ccTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGcc < 8:16536/98‑1 (MQ=255) tACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATAcgc < 8:284108/148‑1 (MQ=255) aCAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATAcg < 2:142238/146‑1 (MQ=255) aCAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATAcg > 1:142238/1‑146 (MQ=255) gCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTc < 4:149122/149‑1 (MQ=255) ccAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTAAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCg > 4:75533/1‑149 (MQ=255) aT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGcc < 4:110780/149‑1 (MQ=255) aT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCAATTTTTAATG‑TGGAATAGGCCCATAGGTGCGCAACCCCGCGCAGTTGACCAGCAAAAAGATACGCCGCTCGc > 1:127155/1‑149 (MQ=255) gTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCcttctt > 5:229469/1‑149 (MQ=255) ttACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCttcttc < 6:188301/149‑1 (MQ=255) cGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGAc > 6:290710/1‑115 (MQ=255) cGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGAc < 5:290710/115‑1 (MQ=255) cGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGAt > 6:72098/1‑127 (MQ=255) cGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGAt < 5:72098/127‑1 (MQ=255) atggcaCAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTAATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCa > 7:250287/1‑149 (MQ=255) caccGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGaa < 7:267979/149‑1 (MQ=255) acaGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAg < 8:51125/149‑1 (MQ=255) caGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGc < 3:79213/149‑1 (MQ=255) aGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGcc > 1:200613/1‑149 (MQ=255) ggcggcTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCt < 7:146302/149‑1 (MQ=255) gcTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGaaa < 1:231842/149‑1 (MQ=255) tCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAgg > 7:319784/1‑149 (MQ=255) tCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGAGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAgg > 5:226969/1‑149 (MQ=255) gggCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCAGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGATCTAGAACCAAGcc > 5:90396/1‑139 (MQ=255) aGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCgg < 5:378062/149‑1 (MQ=255) gCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCggc > 2:183437/1‑149 (MQ=255) aCTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAg < 8:25515/149‑1 (MQ=255) aCTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAg < 1:71052/149‑1 (MQ=255) ttCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGgc < 8:270797/131‑1 (MQ=255) agcagATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCg > 2:47041/1‑147 (MQ=255) agcagATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGcc > 2:41302/1‑148 (MQ=255) aTCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGCAAGGCGCAGCGGCTGGCTGAGGTCGCAGgcgc > 4:89031/1‑149 (MQ=255) tCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGcgcg < 1:183437/149‑1 (MQ=255) ccTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGcgcg > 5:114959/1‑148 (MQ=255) gTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAACGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAAc > 8:60170/1‑149 (MQ=255) ttcctggCCCATGAATGGGCC‑GGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAg > 6:334881/6‑149 (MQ=255) cgtcgGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAg < 2:127155/148‑1 (MQ=255) tcgGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCAc < 5:109032/149‑1 (MQ=255) ctggCCCATGAATGGGCCGACGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCa > 1:5432/3‑149 (MQ=255) gCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCATGCGCGGAACAGCACCTc > 7:196591/1‑149 (MQ=255) gCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTc < 6:360322/149‑1 (MQ=255) cccATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTc > 6:235610/1‑148 (MQ=255) ccATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCGAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGa > 1:188031/1‑149 (MQ=255) ccATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCTGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGa > 4:253919/1‑149 (MQ=255) | ATCCATGGGCCAGGCGCCACCCCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCAT‑‑‑CAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCC‑AGGAA‑CGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGA > NC_002947/516546‑516837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |