| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 556,978 | C→T | 6.2% | R9R (CGC→CGT) | rpsN → | 30S ribosomal protein S14 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 556,978 | 0 | C | T | 6.2% | 281.7 / 5.7 | 96 | R9R (CGC→CGT) | rpsN | 30S ribosomal protein S14 |
| Reads supporting (aligned to +/- strand): ref base C (39/51); new base T (3/3); total (42/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.41e-01 | |||||||||||
CAAGATCGATGCTCTGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTGCAGAAGCAGCCACGCGACGCTAGCGC > NC_002947/556830‑557121 | cAAGATCGATGCTCTGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGTCAAGAAGAGCATGAAAAACcgc < 4:25765/149‑1 (MQ=255)cAAGATCGATGCTCTGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGACGAGCATGAAAAACcgc < 2:245050/149‑1 (MQ=255)cAAGATCGATGCTCTGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACcgc > 8:195633/1‑149 (MQ=255) aaGATCGATGCTCTGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGG‑AAATGGCCAAGAAGAGCATGAAAAACcgc > 6:390756/1‑147 (MQ=255) agagCGATGCCCTGCGCGGGCTGGACATCACCCTGCCCACCACTGCTCGTTCGGCCGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTCCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGa < 4:24335/149‑1 (MQ=255) gATCGATGCTCTGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAg < 8:13355/149‑1 (MQ=255) aTGCTCTGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTg > 4:76313/1‑147 (MQ=255) aTGCTCTGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGaa < 4:270150/149‑1 (MQ=255) gCTCTGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGc > 2:337651/1‑149 (MQ=255) tctGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGATAATGGCCAAGAAGAGCATGAAAAACCGCGACCTGAAGctt > 8:363849/1‑147 (MQ=255) tctGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑t > 5:321309/1‑149 (MQ=255) tGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACTAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑t < 3:253501/147‑1 (MQ=255) tGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑t < 4:134438/147‑1 (MQ=255) cgcgGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAg > 4:287005/1‑148 (MQ=255) tgatctcATCACCCTGCCCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGCTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAATAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACg < 1:140642/143‑1 (MQ=255) tGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGTGAGCTGACGCT‑TCAGCTCGCgg < 4:298303/148‑1 (MQ=255) tGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGTGAGCTGACGCT‑TCAGCTCGCgg < 4:350810/148‑1 (MQ=255) tGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACgg < 6:125914/148‑1 (MQ=255) gACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAg > 4:95715/1‑149 (MQ=255) aCATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAg > 5:76384/1‑148 (MQ=255) aTCACCCTGACCACCACTCCTCGTTCGGAACACGCAGGCCGCGCTCTGCTGCGTGCTTTCAAGCTCCCGTTCCGCAACAGATTCGAGTACGAAAATGGCCAAGAAGACCAACAAAAACCGCGACCAGAACCG‑TCAGCTCACgcacatcc > 2:140642/1‑142 (MQ=255) tCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCaaa < 7:195633/149‑1 (MQ=255) cACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAg > 6:250656/1‑149 (MQ=255) aCCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGt < 7:363849/149‑1 (MQ=255) cccTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGtt < 7:86272/149‑1 (MQ=255) cccTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGtt < 1:210050/149‑1 (MQ=255) ccTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTc > 6:26016/1‑149 (MQ=255) cTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCg < 6:321309/149‑1 (MQ=255) accaccACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCt < 5:250656/148‑1 (MQ=255) accaccACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCCTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGc < 4:218772/147‑1 (MQ=255) acTGCTCGTTCGGACTACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCAGGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGc < 6:291886/149‑1 (MQ=255) tGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGtt > 8:219719/1‑136 (MQ=255) tGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGtt < 7:219719/136‑1 (MQ=255) tGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGt > 2:284832/1‑149 (MQ=255) cTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTg < 5:88491/148‑1 (MQ=255) tCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTgct > 2:375006/1‑149 (MQ=255) gTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTgctga < 8:113104/149‑1 (MQ=255) ttCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTgctgag < 4:187913/149‑1 (MQ=255) ggACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTgctgagct > 2:22681/1‑148 (MQ=255) gacgacGAAAGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTgctgagctg > 4:19202/1‑148 (MQ=255) acgacgAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGTGAGCTGACGCT‑TCAGCTCGCGGttttt > 5:102758/1‑116 (MQ=38) acgacgAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGTGAGCTGACGCT‑TCAGCTCGCGGttttt < 6:102758/120‑5 (MQ=38) cgacgaAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGaaa < 7:260331/149‑1 (MQ=255) gacgaAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAg < 3:287005/149‑1 (MQ=255) gacgaAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAg > 3:274295/1‑149 (MQ=255) gacgaAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAg > 6:222694/1‑149 (MQ=255) gaagaATGCCGCGCTCTGCTGGGTGCTTTCAATTTCCCGTTCCGCAACTGTTTGGAGTATGAAAATGGCCAAGAACATCATGAAAAACCGCGAGCTGAAGCGCTCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGaaa < 1:284832/146‑1 (MQ=255) gaAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAGACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGa > 8:175493/1‑149 (MQ=255) gaAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGa < 3:76313/149‑1 (MQ=255) aGGGCGCGCTCTGCTGCTTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCT‑AGAAGCGTGCTGAGCTGAAAGCGACCa < 3:209579/149‑1 (MQ=255) cgcgCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCg > 8:295447/1‑149 (MQ=255) cgcgCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCg > 4:352093/1‑149 (MQ=255) cgcTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGt > 2:312325/1‑148 (MQ=255) cgcTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTc < 3:19202/149‑1 (MQ=255) tctGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAAc > 1:334889/1‑149 (MQ=255) tgctgcGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAAc < 3:352093/147‑1 (MQ=255) cGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAAc < 1:312325/148‑1 (MQ=255) cGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAAc < 7:295447/148‑1 (MQ=255) gTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTACGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGc < 1:273298/149‑1 (MQ=255) tttCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCctct > 8:83465/1‑149 (MQ=255) tttCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGGAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCctct > 2:109553/1‑149 (MQ=255) ttCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCtctc > 1:59723/1‑149 (MQ=255) tCAAGTTCCCGTTCCGCAACTGATTGGAGTAGG‑AAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCtctc < 5:390756/147‑1 (MQ=255) aaGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCag < 6:342953/149‑1 (MQ=255) aaGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCa < 5:222694/148‑1 (MQ=255) gTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCagaa < 5:26016/149‑1 (MQ=255) gTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCag > 2:326495/1‑147 (MQ=255) ccGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCGGAGCTGAAAGCGACCATCGTCACCCTGACCGCCTCTCCAGAAGAGc > 6:279500/1‑149 (MQ=255) ccGGTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGc < 4:291856/149‑1 (MQ=255) cGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCg > 6:300691/1‑149 (MQ=255) ccGCAACTTATTGGAGTATGAAAATGGCAAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGttt < 1:335076/148‑1 (MQ=255) ccGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGttt < 5:204661/148‑1 (MQ=255) ccGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGttt < 6:76384/148‑1 (MQ=255) ccGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGttt < 2:334889/148‑1 (MQ=255) cGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCTTGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCg < 1:143668/149‑1 (MQ=255) cGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTc > 5:1512/1‑148 (MQ=255) cGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTc < 6:1512/148‑1 (MQ=255) gCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGc < 1:337651/149‑1 (MQ=255) gCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGc > 6:41244/1‑149 (MQ=255) cAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCt < 5:41244/149‑1 (MQ=255) tGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCg < 3:95715/149‑1 (MQ=255) gAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCg > 6:1154/1‑149 (MQ=255) tAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGctc > 7:225403/1‑149 (MQ=255) ggAAAATGGCCAAGAAGAGCATGAAAGACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGctct < 7:175493/148‑1 (MQ=255) ggAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTg > 1:352952/1‑149 (MQ=255) ggAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTg < 1:22681/149‑1 (MQ=255) ggAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTg < 1:326495/149‑1 (MQ=255) ggAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTg > 2:352153/1‑149 (MQ=255) gAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGATCTg > 6:133915/1‑148 (MQ=255) aaaaTGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCTTCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTg > 3:22344/1‑147 (MQ=255) aaaaTGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCACCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTGc < 4:253466/148‑1 (MQ=255) gCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTGCAGAag > 1:208451/1‑147 (MQ=255) cAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTGCAGAagcagc > 4:370467/1‑149 (MQ=255) gaagaGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTGCAGAAGCAGCCAc < 2:208451/149‑1 (MQ=255) agCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTGCAGAAGCAGCCACGCGa < 1:352153/149‑1 (MQ=255) aaaaCCTCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGATCTGAAAGCGCCCATc > 2:194339/1‑74 (MQ=255) aaaaCCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATc < 1:194339/74‑1 (MQ=255) aaaaCCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTGCAGAAGCAGCCACGCGACGCTAgc < 1:375006/149‑1 (MQ=255) taCCGTGAGCTGACGCT‑TCAGCTCGCGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTGCAGAAGCAGCCACGCGACGCTAgcgc > 5:311390/2‑149 (MQ=255) taCCGTGAGCTGACGCT‑TCAGCTCGCGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTGCAGAAGCAGCCACGCGACGCTAgcgc > 2:152261/2‑149 (MQ=255) | CAAGATCGATGCTCTGCGCGGTTTGGACATCACCCTGACCACCACTGCTCGTTCGGACGACGAAGGCCGCGCTCTGCTGCGTGCTTTCAAGTTCCCGTTCCGCAACTGATTGGAGTAGGAAAATGGCCAAGAAGAGCATGAAAAACCGCGAGCTGAAGCG‑TCAGCTCACGGTAGCAAAGTTCGCTAAGAAGCGTGCTGAGCTGAAAGCGACCATCGTCAACCTGAACGCCTCTCCAGAAGAGCGTTTCGCTGCCGTTGTCGCTCTGCAGAAGCAGCCACGCGACGCTAGCGC > NC_002947/556830‑557121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |