| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 68,344 | A→C | 9.9% | intergenic (+32/+143) | PP_0057 → / ← PP_0058 | major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 68,344 | 0 | A | C | 9.9% | 238.6 / 16.2 | 81 | intergenic (+32/+143) | PP_0057/PP_0058 | major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (38/35); new base C (4/4); total (42/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01 | |||||||||||
CCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGTCAAG > NC_002947/68200‑68491 | ccGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGcc < 1:157725/149‑1 (MQ=255)ccGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGcc > 3:377404/1‑149 (MQ=255) gATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTTTTACAGCCGGttt < 2:292847/149‑1 (MQ=255) tcttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGtttttt < 4:377404/148‑1 (MQ=255) cttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTa > 8:12010/1‑149 (MQ=255) ttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTAt > 1:249985/1‑149 (MQ=255) ttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTAt > 8:280444/1‑149 (MQ=255) cttagggCTGTGGTAGCCGGTGCTGGTGACCGGGATCAGGCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAATGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTa < 8:317178/142‑1 (MQ=255) ctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTTTTACAGCCGGTTTTTTTa < 5:115744/146‑1 (MQ=255) cGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGc < 7:145839/146‑1 (MQ=255) tgGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCaaaaaaa < 8:205933/149‑1 (MQ=255) aCCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTa > 5:155942/1‑149 (MQ=255) cccGGTGCTTGTGACCGGGATAATCCTTGTTGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGACATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTAt < 5:108144/149‑1 (MQ=255) ccGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATg > 2:239976/1‑149 (MQ=255) ccGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATg > 1:322000/1‑149 (MQ=255) cGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATg > 8:341765/1‑148 (MQ=255) cGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGa > 2:40988/1‑148 (MQ=255) aGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTc < 6:124046/149‑1 (MQ=255) gCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAACGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCa < 2:262105/149‑1 (MQ=255) tggtTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACaaa < 3:208283/149‑1 (MQ=255) ttGGGATCTTCGGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCAGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAATTTCATACAAAGa > 4:24449/1‑148 (MQ=255) gATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGaaaa > 7:144559/1‑130 (MQ=255) gATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGaaaa < 8:144559/130‑1 (MQ=255) gATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATaa < 5:241922/149‑1 (MQ=255) ttctGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAg > 3:202137/1‑149 (MQ=255) ctgtctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTa < 2:322000/146‑1 (MQ=255) tctgAGGGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAAt > 2:159625/1‑149 (MQ=255) tctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAAt > 4:87868/1‑149 (MQ=255) ctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTa < 1:38714/142‑1 (MQ=255) ctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTa > 2:38714/1‑142 (MQ=255) tgAGAGAAACCAAGGATGTAGATATCGAGAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTAt > 1:220031/1‑85 (MQ=255) tgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTAt < 2:220031/85‑1 (MQ=255) tgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAAtt > 1:247194/1‑148 (MQ=255) tgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAAtt > 5:393780/1‑148 (MQ=255) tgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAAATAGCAAAtt > 7:272431/1‑148 (MQ=255) gagagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCa > 7:35007/1‑149 (MQ=255) agagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAAtt < 2:323779/146‑1 (MQ=255) gagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTATCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑t > 3:254132/1‑148 (MQ=255) agaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGACTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑Ta > 8:105255/1‑148 (MQ=255) aCCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACt > 5:282047/1‑148 (MQ=255) aCCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACt > 3:41180/1‑148 (MQ=255) cAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGAtttt > 4:287967/1‑102 (MQ=255) aaGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACt > 1:385914/1‑129 (MQ=255) aaGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACt < 2:385914/129‑1 (MQ=255) aGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGat < 4:227863/149‑1 (MQ=255) aGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGa > 8:181961/1‑148 (MQ=255) aTGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATc < 6:282047/149‑1 (MQ=255) gTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCaa > 1:322087/1‑149 (MQ=255) gATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTc < 4:41180/149‑1 (MQ=255) tatCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGATGTAAAAGCCGGTTTTTTTATGCCTAAAAAAAAATTATGCACGATTTTAAGAAAAAATTAATAAAAAGAAATAAATAGAAAATTCA‑TAAAATTATATATAAATTCa > 5:162885/1‑148 (MQ=255) aCAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCAtt < 2:249985/149‑1 (MQ=255) aaGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTaa < 4:202137/149‑1 (MQ=255) tCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATc > 4:124043/1‑148 (MQ=255) cTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCACTACACTTAGATATCAATTCAAGCATTTAATc < 1:40988/148‑1 (MQ=255) aTGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCaa < 4:254132/147‑1 (MQ=255) tGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCaaaaa < 6:393780/149‑1 (MQ=255) cacaTGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTg > 3:321025/1‑148 (MQ=255) aggcATAAAAAAACCGGCTTTTACAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGca > 3:351398/4‑146 (MQ=255) aggcATAAAAAAACCGGCTTTTACAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGca < 4:351398/143‑1 (MQ=255) gCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGcacac > 2:391581/1‑148 (MQ=255) ccATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACaa < 6:3284/149‑1 (MQ=255) cATAAAAAAACCGGCTTTAAAAGCAGGTTTTTTTATGCCTAAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACaa < 7:341765/148‑1 (MQ=255) cATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACaa < 7:12010/148‑1 (MQ=255) aTAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGt > 4:17795/1‑149 (MQ=255) tAAAAAAACCGGCTTTTACAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTAA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGt > 7:329021/1‑148 (MQ=255) aaaaaaCCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTAt > 6:240329/1‑149 (MQ=255) aaaaaCCGGCTTTTACAGCCGGTTTTTTTATGCCTCAAAGAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTa > 4:66183/1‑104 (MQ=38) aaaaaCCGGCTTTTACAGCCGGTTTTTTTATGCCTCAAACAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTa < 3:66183/104‑1 (MQ=38) aaaaaCCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATc > 6:384559/1‑149 (MQ=255) aaaCCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCca < 6:155942/149‑1 (MQ=255) aaCCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCcac < 3:124043/149‑1 (MQ=255) ccGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGc > 3:128290/1‑132 (MQ=255) ccGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGc < 4:128290/132‑1 (MQ=255) cGGCTTTTACAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAg > 2:384689/1‑148 (MQ=255) ggCTGTAAAATCAGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGaa < 7:280444/149‑1 (MQ=255) ggCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAg > 6:243808/1‑147 (MQ=255) ggCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGaa < 3:87868/149‑1 (MQ=255) tctttAAAAGCCTGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGaa < 3:10503/144‑1 (MQ=255) tAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAgg < 3:17795/146‑1 (MQ=255) tAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGt < 2:247194/147‑1 (MQ=255) tAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCAACAGaa > 4:10503/1‑144 (MQ=255) aaaGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGTCAAg < 1:391581/149‑1 (MQ=255) | CCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTTTTTATGCCTCAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCA‑TACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGTCAAG > NC_002947/68200‑68491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |