Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,048,573 C→A 6.7% V343F (GTC→TTC)  PP_0907 ← RND transporter membrane fusion protein‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,048,5730CA 6.7% 226.0 / 4.2 72V343F (GTC→TTC) PP_0907RND transporter membrane fusion protein‑like protein
Reads supporting (aligned to +/- strand):  ref base C (31/36);  new base A (2/3);  total (33/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

CGTTGTCCTGGCCTATGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCGGGTTGGGCAGCAGAATC  >  NC_002947/1048426‑1048721
                                                                                                                                                     |                                                                                                                                                    
cGTTGTCCTGGCCTATGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGAc                                                                                                                                                      >  7:348879/1‑148 (MQ=255)
  ttGTCCTGGCCTATGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGTCAGCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCACTCTTTACCGTGCGCTGTTCGGCGAc                                                                                                                                                      >  1:314658/1‑148 (MQ=255)
       cTGGCCTATGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTggg                                                                                                                                              >  7:224397/1‑149 (MQ=255)
       cTGGCCTATGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTggg                                                                                                                                              >  2:114611/1‑149 (MQ=255)
       cTGGCCTATGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTC‑TTACCGTGCGCTGTTCGGCGACCAGCTggg                                                                                                                                              <  2:266933/148‑1 (MQ=255)
          gCCTATGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGtt                                                                                                                                           >  5:319131/1‑149 (MQ=255)
           ccTATGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTg                                                                                                                                          <  4:65313/149‑1 (MQ=255)
            cTATGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGCGGTAgg                                                                                                                                         >  5:356586/1‑149 (MQ=255)
             tATGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGc                                                                                                                                        >  4:382910/1‑149 (MQ=255)
               tGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGccc                                                                                                                                      <  5:24285/149‑1 (MQ=255)
               tGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGccc                                                                                                                                      <  3:268842/149‑1 (MQ=255)
               tGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGcc                                                                                                                                       <  6:319131/148‑1 (MQ=255)
                  gTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTg                                                                                                                                   <  8:224397/149‑1 (MQ=255)
                     ttGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTgtc                                                                                                                                 <  8:235695/148‑1 (MQ=255)
                           cACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTa                                                                                                                           >  6:14837/1‑148 (MQ=255)
                             ccGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTacac                                                                                                                        <  4:373567/149‑1 (MQ=255)
                               gggTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCg                                                                                                                      >  2:22927/1‑149 (MQ=255)
                                        tttCAGCTGCCCGGCGGTGCCCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTgtc                                                                                                                                 >  5:325566/1‑129 (MQ=255)
                                        tttCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTgtc                                                                                                                                 >  5:320193/1‑129 (MQ=255)
                                        tttCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTgtc                                                                                                                                 <  6:325566/129‑1 (MQ=255)
                                        tttCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGGCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTgtc                                                                                                                                 <  6:320193/129‑1 (MQ=255)
                                          tCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATcc                                                                                                           >  7:271441/1‑149 (MQ=255)
                                           cAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATcc                                                                                                           <  8:156140/148‑1 (MQ=255)
                                           cAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCt                                                                                                          >  1:258282/1‑149 (MQ=255)
                                            aGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCtt                                                                                                         <  5:39424/149‑1 (MQ=255)
                                              cTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGt                                                                                                       <  1:341908/149‑1 (MQ=255)
                                                gCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTg                                                                                                                 >  8:14041/1‑137 (MQ=255)
                                                gCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTg                                                                                                                 <  7:14041/137‑1 (MQ=255)
                                                 cccGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTc                                                                                                      <  1:135040/147‑1 (MQ=255)
                                                       ggTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCg                                                                                              <  5:14837/149‑1 (MQ=255)
                                                         tGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGt                                                                                            <  3:158053/149‑1 (MQ=255)
                                                          gACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGTGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGCCCAGCTGGGGTTGGTCCTTGTCGTCGTACACCGGTTTGCCCTCCTTGTCCTTTCTCGGt                                                                                            >  6:188398/1‑148 (MQ=255)
                                                           accaccTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTg                                                                                           <  8:271441/148‑1 (MQ=255)
                                                             caccTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAgg                                                                                        >  4:353308/1‑149 (MQ=255)
                                                                   t‑‑tCCCCGGCCTGCAGGCCTTCTCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACa                                                                                   <  2:133044/148‑1 (MQ=255)
                                                                        cccGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATc                                                                                                            <  5:369037/120‑1 (MQ=255)
                                                                        cccGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATc                                                                                                            >  6:369037/1‑120 (MQ=255)
                                                                               tGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCtt                                                                                                         >  3:271266/1‑116 (MQ=255)
                                                                               tGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCtt                                                                                                         <  4:271266/116‑1 (MQ=255)
                                                                                 cAGGCCTTCGCTGACTACAACCACGCCGTCTCCGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGAACAGCTGGGGTTGGCACTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGtt                                                                        <  5:275068/147‑1 (MQ=255)
                                                                                   ggCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTTCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCa                                                                    <  2:314658/149‑1 (MQ=255)
                                                                                                 aCAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAgg                                                       >  6:162962/1‑148 (MQ=255)
                                                                                                  cAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGtt                                                                        >  3:17969/1‑130 (MQ=255)
                                                                                                  cAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGtt                                                                        <  4:17969/130‑1 (MQ=255)
                                                                                                  cAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAgg                                                       <  8:111381/147‑1 (MQ=255)
                                                                                                  cAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAgg                                                       <  1:114611/147‑1 (MQ=255)
                                                                                                  cAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGt                                                      >  8:287199/1‑148 (MQ=255)
                                                                                                   aaCCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTaa                                                    >  2:78955/1‑149 (MQ=255)
                                                                                                   aaCCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCAATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTaa                                                    >  5:35010/1‑149 (MQ=255)
                                                                                                     ccACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATg                                                  >  4:358586/1‑149 (MQ=255)
                                                                                                      cACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATgg                                                 <  5:151723/149‑1 (MQ=255)
                                                                                                               tcGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCg                                        >  5:21608/1‑149 (MQ=255)
                                                                                                                 ggCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATTCAGGGTGTAGGTAATGGCGCTTTCCGGc                                      <  1:22927/149‑1 (MQ=255)
                                                                                                                 ggCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTcc                                         <  3:382910/146‑1 (MQ=255)
                                                                                                                 ggCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCAAAAATTGTACTTTATAGGTGAGGCGAAATAAACCGAGTTGACAAAAAGGGTGTAGGTAATGGCGCTTTACGGc                                      >  8:248635/1‑149 (MQ=255)
                                                                                                                    gcTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGcac                                    >  4:106023/1‑148 (MQ=255)
                                                                                                                             tCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGc                          >  7:68750/1‑149 (MQ=255)
                                                                                                                               tttACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGCGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCgg                        >  7:176416/1‑149 (MQ=255)
                                                                                                                                 tACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCgg                        <  7:248635/147‑1 (MQ=255)
                                                                                                                                   ccGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGc                    >  7:12491/1‑149 (MQ=255)
                                                                                                                                     gTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCgg                  >  4:193961/1‑149 (MQ=255)
                                                                                                                                     gTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCgg                  <  3:353308/149‑1 (MQ=255)
                                                                                                                                     cccagcTGGTCGCCGAACAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAg                                                        >  4:318969/5‑111 (MQ=255)
                                                                                                                                     cccagcTGGTCGCCGAACAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAg                                                        <  3:318969/107‑1 (MQ=255)
                                                                                                                                      tGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCggg                 <  7:287199/149‑1 (MQ=255)
                                                                                                                                       cagcTGGTCGCCGAACAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCGGGt                >  5:330674/3‑149 (MQ=255)
                                                                                                                                         gcTGGTCGCCGAACAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCGGGTTg              <  6:330674/149‑1 (MQ=255)
                                                                                                                                          cTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACa                                                                <  2:87668/98‑1 (MQ=255)
                                                                                                                                          cTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACa                                                                >  1:87668/1‑98 (MQ=255)
                                                                                                                                              tCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCGGGTTGGgcag         >  3:66839/1‑149 (MQ=255)
                                                                                                                                               cGGCGACCAGCTTGGGTTGGCCCTTGTCTTCCTACACCGCTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGATTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCGGGTTGGgcag         <  6:356586/148‑1 (MQ=255)
                                                                                                                                               cGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCGGGTTGGgcag         <  3:193961/148‑1 (MQ=255)
                                                                                                                                                ggCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCGGGTTGGgcagca       <  6:35010/149‑1 (MQ=255)
                                                                                                                                                   gACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCGGGTTGGGCAGCAGaa    <  1:78955/149‑1 (MQ=255)
                                                                                                                                                     ccAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCGGGTTGGGCAGCAGAATc  <  3:358586/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CGTTGTCCTGGCCTATGCGTATTGCGGCACCGGGTGTGAGTTTCAGCTGCCCGGCGGTGACCACCTGT‑‑TCCCCGGCCTGCAGGCCTTCGCTGACTACAACCACGCCGTCTCGGCGCTCGCCAGTCTTTACCGTGCGCTGTTCGGCGACCAGCTGGGGTTGGCCCTTGTCGTCGTACACCGGTTTGCCATCCTTGTCCTTTCTCGGTGAGGCGACATACACCGAGTTGCCATACAGGGTGTAGGTAATGGCGCTTTCCGGCACCACCACTTGCGGCTGCGGGTTGGGCAGCAGAATC  >  NC_002947/1048426‑1048721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑