| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,101,800 | A→C | 6.4% | A127A (GCA→GCC) ‡ | mlaD → | phospholipid ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,101,800 | 0 | A | C | 6.4% | 277.1 / 6.5 | 89 | A127A (GCA→GCC) ‡ | mlaD | phospholipid ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (41/42); new base C (4/2); total (45/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCCTGCTGGT > NC_002947/1101656‑1101946 | cGGTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAcca > 7:353385/1‑149 (MQ=255)cGGTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAcca > 2:349514/1‑149 (MQ=255)cGGTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACACCACTGCCTCGATCCTGACAGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAcca > 1:98064/1‑149 (MQ=255) ggTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGACGGTGAAGACGAAGTGCTCAAGGATGGTGCAAccat < 1:262422/149‑1 (MQ=255) tCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAccatc > 5:210464/1‑148 (MQ=255) gggTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAccatccat < 7:241850/149‑1 (MQ=255) gTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGa < 7:160783/149‑1 (MQ=255) tGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCATGGATGGTTGCACCATCCTTGag < 3:209490/149‑2 (MQ=255) aCGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGaca > 6:20663/1‑148 (MQ=255) gCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGt > 3:170257/1‑149 (MQ=255) aGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGCGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCg > 4:195849/1‑149 (MQ=255) gCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCgg < 4:256403/149‑1 (MQ=255) gACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCa < 4:141046/147‑1 (MQ=255) gACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCa < 3:246311/147‑1 (MQ=255) gACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCAc < 7:200649/148‑1 (MQ=255) aCAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTg < 6:189373/149‑1 (MQ=255) gtcggtcgATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTTGCAccatcctt < 5:289245/127‑3 (MQ=255) gtcggtcgATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTTGCAccatcctt > 6:289245/1‑125 (MQ=255) tcggtcgATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCt > 3:290472/1‑149 (MQ=255) ggtcgATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTg > 7:10958/1‑148 (MQ=255) gtcgATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTgga < 4:290472/149‑1 (MQ=255) aTAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTggagga > 7:25589/1‑148 (MQ=255) tAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATc < 1:13431/149‑1 (MQ=255) ccTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGa > 3:137554/1‑149 (MQ=255) cTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGAt < 1:349514/149‑1 (MQ=255) tGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGAtt > 2:49868/1‑149 (MQ=255) ccgaccgaCTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGCGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGAtt < 3:195849/147‑1 (MQ=255) ccgaccgaCTCCACTGCCTCGATCCTGACCGCCGGTATGCTTGGTGAGAAGTACATCTGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTTGAGGATCTGATTgg < 2:98064/149‑1 (MQ=255) gacTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGGGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGtt > 8:141367/1‑149 (MQ=255) acTCCACTGCCTCGCTCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTc < 8:353385/149‑1 (MQ=255) tCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCaa > 5:389163/1‑143 (MQ=255) tCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCaa < 6:389163/143‑1 (MQ=255) cACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTg < 5:290038/148‑1 (MQ=255) cACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGc > 6:344357/1‑149 (MQ=255) cACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGc > 4:129443/1‑149 (MQ=255) cTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTc < 6:210464/149‑1 (MQ=255) cTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAAct > 2:340101/1‑149 (MQ=255) aTCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGt > 5:281109/1‑149 (MQ=255) aTCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGt > 1:141079/1‑149 (MQ=255) tCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGtt > 8:134391/1‑149 (MQ=255) tCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGtt < 3:129443/149‑1 (MQ=255) aCCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCaa < 5:344357/149‑1 (MQ=255) aCCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCa < 4:170257/148‑1 (MQ=255) cgccgGTTTGCTTGGTGAGAAGTACATCGACATCAGCGTTGGCGGTGGAGACGAAGTGCTCAAGGATTGTGCAACCATACATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTACTGCTAAACTATGTTGGCAAg > 1:284175/1‑148 (MQ=255) ccgGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAggta > 6:191671/1‑147 (MQ=255) ggTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCTGTGAAGACGAAGTGCTCAAGGATTGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAAcc < 3:317781/149‑1 (MQ=255) tGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGaa < 8:10958/148‑1 (MQ=255) ggTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCt > 6:191825/1‑116 (MQ=255) ggTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCt < 5:191825/116‑1 (MQ=255) gTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTCCTCAAGTATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGATGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAgc < 4:332857/148‑1 (MQ=255) tGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGCAgcg > 3:284727/1‑148 (MQ=255) tGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAgcgc < 5:20663/149‑1 (MQ=255) gagaAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAgcgc > 5:22970/1‑148 (MQ=255) agaAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAAc > 1:382014/1‑135 (MQ=255) agaAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAAc < 2:382014/135‑1 (MQ=255) gCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGATCAACTCTGTTGGCAAGGAACCCAAAGAAGCGCAACCGGCTAAta > 4:304412/1‑146 (MQ=255) cATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAg < 2:141079/149‑1 (MQ=255) aTCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAg > 6:258333/1‑148 (MQ=255) aGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAg > 4:57464/1‑148 (MQ=255) cGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTAc < 1:340101/149‑1 (MQ=255) ttGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGa < 5:286729/143‑1 (MQ=255) ttGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGa > 6:286729/1‑143 (MQ=255) ttGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTAcc > 8:136893/1‑148 (MQ=255) gCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGTAAGGAAc > 2:252185/1‑111 (MQ=255) gCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGTAAGGAAc < 1:252185/111‑1 (MQ=255) ggTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGAt > 5:175491/1‑149 (MQ=255) tGAAGACGATGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCAGTGGTGCTGGTGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGAttt < 3:304412/149‑1 (MQ=255) tGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGAttt < 6:281109/149‑1 (MQ=255) gAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGAttt < 5:118313/148‑1 (MQ=255) aaGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTc < 6:22970/148‑1 (MQ=255) aaGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTc < 7:134391/148‑1 (MQ=255) gACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGAt > 2:62707/1‑149 (MQ=255) gAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCaa > 2:39713/1‑114 (MQ=255) gAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCaa < 1:39713/114‑1 (MQ=255) gAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCt < 7:141367/149‑1 (MQ=255) gAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCt > 7:16183/1‑149 (MQ=255) tctaGGATTGTTCAACCATCGATGACACACAGTGGGCAGTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTaa < 5:32916/116‑1 (MQ=255) tCATGGATGGTTGCACCATCCTTGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGACCCGAAAGACGCGCAACCGCCTAATTAAGGAGTACCCATCATTTCGATCATCCGAc > 7:193136/1‑147 (MQ=255) tCATGGATGGTTGCACCATCCTTGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGGATCCGGCTATTTAAGTAGTACCCTTGATTTGGATCCTGCGACGt > 7:198698/1‑149 (MQ=255) aaGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTTGCAAGGAACCGAAAGAAGCGCAACCGGCTAATAAAGGAGTACCCATGATTTCGATCCTGCGACGt < 4:137554/147‑1 (MQ=255) aaGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTg < 1:49868/148‑1 (MQ=255) tggATGGTTGCACCATCCTTGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTgga > 1:286199/2‑148 (MQ=255) gATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCct > 6:187351/1‑149 (MQ=255) tGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCctgc < 7:136893/149‑1 (MQ=255) gTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCctgctg > 3:287114/1‑149 (MQ=255) tGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTaa < 7:33539/109‑1 (MQ=255) tGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTaa > 8:33539/1‑109 (MQ=255) gCAACCATCCATGACACACAGTCGGCAGTGGTGCTGGAGCATCTGATTGGCAAGTACCTGCTCAACTCTGTTGCCAAGGAACCGAAACAACCACAACCGGCTATTTAAGGAGTACCCATGATATCGATCCTGCGACGTGGCCTCCAGGt > 2:110236/1‑149 (MQ=255) gCAACCATCCATGACACACAGTCGGCACTGGTGATGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCCTGCTGGt > 7:291519/1‑149 (MQ=255) | CGGTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCCTGCTGGT > NC_002947/1101656‑1101946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |