| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,130,192 | A→T | 10.9% | intergenic (‑247/+57) | gcvH‑I ← / ← PP_0990 | glycine cleavage system protein H/DoxX family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,130,192 | 0 | A | T | 10.9% | 170.3 / 11.0 | 71 | intergenic (‑247/+57) | gcvH‑I/PP_0990 | glycine cleavage system protein H/DoxX family protein |
| Reads supporting (aligned to +/- strand): ref base A (27/35); new base T (5/3); total (33/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.34e-01 | |||||||||||
ATTTATCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAGGTGG > NC_002947/1130045‑1130336 | atttatCAATAGATTACGTAAATTTACGGAGAAGCCTTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTacga < 7:176333/148‑1 (MQ=255)atttatCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTacgac > 3:61077/1‑149 (MQ=255)atttatCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTacga < 8:205123/148‑1 (MQ=255) atCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGTCGTAg > 4:328518/1‑149 (MQ=255) tCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAg < 7:331463/148‑1 (MQ=255) tCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGc < 3:134477/149‑1 (MQ=255) aGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGaaaa < 5:319783/149‑1 (MQ=255) gATTACGTAAATTTTCGTAGAAGCCGTATTTATTGTGGCGAATGATATCGTTACAGTTGCCACTGAGAGGAAAAGGGTTTGAGCATCACACCGTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGTCGTAGCGAAAAc < 4:246144/149‑1 (MQ=255) gATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGTCGTAGCGaaaa < 3:328518/148‑1 (MQ=255) gATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAAc < 5:62533/149‑1 (MQ=255) aTTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAAc > 3:323167/1‑148 (MQ=255) tACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATgtggt < 2:89780/148‑1 (MQ=255) gagaAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGTAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTg < 2:143575/149‑1 (MQ=255) tttattGTGTGGAATGATATCGTTACATGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAg < 5:378044/148‑1 (MQ=255) tttattGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAgg < 4:61077/149‑1 (MQ=255) ttGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGc > 8:124141/1‑148 (MQ=255) ttGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGc < 2:139139/148‑1 (MQ=255) tgtgGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTTGACTGGCGAGGTGCCAAt > 6:231820/1‑149 (MQ=255) tgtgGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAAt < 6:357280/149‑1 (MQ=255) ggAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGCNGGTGTATCGGGGATGTTTA‑‑TCTAATAAGTAGCGAAAACGATAAATGTGTTGAGTGGAATGTCGAGGTGca > 1:128266/1‑147 (MQ=255) gAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGcc > 8:226470/1‑149 (MQ=255) aTGATATCGTTACAGGTGCCTCTGAGAGGAAATGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCTAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCtt < 7:35070/149‑1 (MQ=255) atatCGTTACCGGTGCCTCTGATAGGAAAAGGGTTTTAGCATCAAACCGTTGTGCACCGACGGCGAGGAGGCTGTTTATCT‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCTAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCg < 6:62102/148‑1 (MQ=255) atCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGt > 3:192038/1‑148 (MQ=255) tCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTc < 6:20006/148‑1 (MQ=255) ttACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCAtct < 4:323167/149‑1 (MQ=255) ttACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCAtc > 7:227227/1‑148 (MQ=255) cAGGTGCCTCTGAGATGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCAc < 2:40569/149‑1 (MQ=255) cAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCa < 7:226470/148‑1 (MQ=255) aGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACt > 4:45326/1‑149 (MQ=255) gTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACttt > 7:290795/1‑149 (MQ=255) ctctGATTGGAAAAGTGTTTGATCATCAAACCCTTGTGAACCTACGGCGCGGTGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACTTAGCTAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTcagc < 4:192038/149‑1 (MQ=255) ctGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTcag > 7:21248/1‑146 (MQ=255) gagaGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCAtc > 3:147818/1‑134 (MQ=255) gagaGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCAtc < 4:147818/134‑1 (MQ=255) agagGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAgat > 7:159941/1‑148 (MQ=255) ggAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATc < 8:21248/149‑1 (MQ=255) gAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGTCGTAGc > 6:213631/1‑74 (MQ=255) acaaGGGTTTGATGCTCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTCGAGGTACGAAGTAGCGAAAACGATAAATGTGGAGCCTGGACAGGCGAGGTGACAATGACCTTCGGTCATCTCACTTTCAGCAGATGATc > 1:310194/3‑149 (MQ=255) aaaGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCa < 8:123991/148‑1 (MQ=255) aaGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGc < 3:119760/149‑1 (MQ=255) aGGGTTTGATGCTCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTg < 8:326568/98‑1 (MQ=255) gggTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTA‑‑GCGAAGCCGTAGCGGAAACGATACATGTTGTGCCGGGGCTGGGGCGGTGCCAATGGCCGTCGGTCATCTCCCATTACACAGAAGATCCAGCg > 2:196050/1‑148 (MQ=255) gTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGaa > 1:105429/1‑148 (MQ=255) gCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACgcgc > 3:343770/1‑149 (MQ=255) taaaaCCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCgg > 6:345951/3‑149 (MQ=255) tCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCgg > 2:167550/1‑149 (MQ=255) cAAACCCGTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGgc < 6:251697/149‑1 (MQ=255) aaCCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTcagc < 6:174793/121‑1 (MQ=255) aaCCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTcagc > 5:174793/1‑121 (MQ=255) cTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCg < 2:105429/149‑1 (MQ=255) cACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAAc < 3:340271/149‑1 (MQ=255) ccGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGACCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCa < 2:310194/149‑1 (MQ=255) aCGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTAAGACGTAGCGAAAACGATACATGAGGTGCCTGGACGGGCGAGGTGCCAATGGCCTTCCGTCATATCACATTCAGCAGATGCTCCACGGAAAACGAGCCGGCCCCTCGGGcctccaa > 6:38595/1‑141 (MQ=255) ggCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGag > 2:230627/1‑148 (MQ=255) gCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGagca < 3:45326/149‑1 (MQ=255) gaggagGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGagcagc < 2:128266/149‑1 (MQ=255) gCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCGACCAGGAGCAGCAAGAGc > 1:14451/1‑149 (MQ=255) cTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGcc < 8:159941/149‑1 (MQ=255) tgtATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTAGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTg > 8:263802/1‑149 (MQ=255) gtATCG‑‑‑‑T‑TTTC‑‑GCTGCGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTc > 7:334756/1‑121 (MQ=255) gtATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTc < 8:334756/121‑1 (MQ=255) aTCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGcc > 3:117259/1‑148 (MQ=255) tCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGcc > 7:147736/1‑147 (MQ=255) cG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCca < 4:343770/148‑1 (MQ=255) t‑tttC‑‑GCTACGTCGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcaggt > 5:255639/1‑149 (MQ=255) t‑tttC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcaggt > 7:26931/1‑149 (MQ=255) ttC‑‑GCTACGTCGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcag < 2:172120/145‑1 (MQ=255) ttC‑‑GCTACGTCGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcag > 1:172120/1‑145 (MQ=255) c‑‑GCTACGTCGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcaggtcagg > 1:270207/1‑149 (MQ=255) c‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcaggtcag < 5:231820/148‑1 (MQ=255) gCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcaggtcaggt < 5:345951/149‑1 (MQ=255) gCTACCACGAAGCTAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcaggtcaggt < 1:196050/149‑1 (MQ=255) tACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAggtgg > 4:92265/1‑149 (MQ=255) | ATTTATCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCG‑‑‑‑T‑TTTC‑‑GCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTGGCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAGGTGG > NC_002947/1130045‑1130336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |