| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,483,877 | T→G | 5.1% | intergenic (+22/‑46) | yhdW → / → yhdX | amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,483,877 | 0 | T | G | 5.1% | 282.5 / 4.0 | 90 | intergenic (+22/‑46) | yhdW/yhdX | amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (41/43); new base G (3/2); total (45/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAAGTGGGTAACTATGGCGAAGTGTTCGAGAAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGG > NC_002947/1483729‑1484025 | gcaagTGGGTAACTATGGCGAAGTGTTCGAGAAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCAt > 6:136819/1‑149 (MQ=255) agTGGGTAACTATGGCGAAGTGTTCGAGAAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATccc < 1:30564/149‑1 (MQ=255) ggTAACAATGGCGAAATGTTCGAGAAGAACATGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCccgccg > 4:89703/1‑149 (MQ=255) gTAACTATGGCGAAGTGTTCGAGAAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCccgccgc > 1:370174/1‑149 (MQ=255) cTATGGCGAAGTGTTCGAGAAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCa < 6:340440/149‑1 (MQ=255) tATGGCGAAGTGTTCGAGAAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAg < 6:395376/149‑1 (MQ=255) tGGCGAAGTGTTCGAGAAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCGGGATGCCGCCGCAg < 1:259824/147‑1 (MQ=255) tGGCGAAGTGTTCGAGAAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAg < 5:126749/147‑1 (MQ=255) tgtTCGAGAAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGaa < 8:139076/149‑1 (MQ=255) cGAGAAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAATGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATccc > 1:271606/1‑149 (MQ=255) gagaAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCAACCCGCCGCCCCACGCTGTTCGAATccc > 2:389536/1‑148 (MQ=255) agaagaTCCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTa < 1:137121/149‑1 (MQ=255) agaagaACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTa > 2:137121/1‑149 (MQ=255) agaagaACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTa < 2:288633/149‑1 (MQ=255) aagaaCCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACt > 3:9231/1‑149 (MQ=255) aagaaCCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAAAGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCCCAGGCTGATCGAATCactact > 4:31841/1‑149 (MQ=255) gaaCCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACGACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGt > 6:381864/1‑149 (MQ=255) gaaCCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGt > 3:242883/1‑149 (MQ=255) tGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCggg > 3:138041/1‑149 (MQ=255) gCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCa > 7:292583/1‑149 (MQ=255) gCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCa < 4:60802/149‑1 (MQ=255) ccAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTAGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCAc > 1:279505/1‑149 (MQ=255) cAGAGCACTGACTTGAAGATCGCCCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGATAGAATCCCTAATGTCCGGGGCACt > 6:111347/1‑149 (MQ=255) gCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCAt > 2:262212/1‑149 (MQ=255) ctcTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCTGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATg < 3:31841/147‑1 (MQ=255) cACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCGGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATg > 4:238832/1‑149 (MQ=255) aCTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCaaaa < 8:34996/149‑1 (MQ=255) aCTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCaaa > 6:305272/1‑148 (MQ=255) ttGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAaaat > 5:183989/1‑148 (MQ=255) ttGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAaaat > 8:55562/1‑148 (MQ=255) gAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAaaatca > 3:171406/1‑148 (MQ=255) aaGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAaaatcaaa < 5:305272/149‑1 (MQ=255) aGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAaaatcaaat < 1:262212/149‑1 (MQ=255) gACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTAGGCGCCTGCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGgc < 6:183989/148‑1 (MQ=255) gACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGgc < 7:42976/148‑1 (MQ=255) gCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCAccc > 4:139433/1‑147 (MQ=255) gCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCa < 1:389536/148‑1 (MQ=255) cATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAg > 5:373049/1‑149 (MQ=255) aTGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATcc < 6:42449/102‑1 (MQ=255) aTGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATcc > 5:42449/1‑102 (MQ=255) aTGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAgg < 6:69765/149‑1 (MQ=255) aTGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAgg > 7:139680/1‑149 (MQ=255) tGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCCGGCTGTTCGAATCCATACTGTCCGGGGCCCTTCATGCAAAATCAAATCGGCGCACCCacagg > 4:214514/1‑145 (MQ=255) tGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCAGCCCGCCGCCGCCGGCTGTTCGAATCCCTACTTTCCGGGGCACTTCCTGCAAAATCACATCGGCGCCCCCAAggg > 4:209436/1‑149 (MQ=255) aaCGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCt < 4:242883/149‑1 (MQ=255) ccTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTcc < 4:9231/149‑1 (MQ=255) tgtgGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCt > 7:231688/1‑149 (MQ=255) gAACAACGGCCGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCCAATCCCAACTGTCCGCGGCACTTCAAGCAAAAACAAATCGGCGCACCCAAGGGCATGACCCTTAAc > 8:5010/1‑149 (MQ=255) aacaacGGCGGCATCCAGTACGCGCCTCCACTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAAc > 1:32013/1‑148 (MQ=255) acaacGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCAGCCGCCGCAGGCTGTTCGACTCGCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTACCTTGAc > 4:286235/1‑147 (MQ=255) caacGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGAt > 5:342184/1‑149 (MQ=255) cggcggCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCcg > 6:132460/1‑149 (MQ=255) ggcggcATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCcgc > 7:101767/1‑149 (MQ=255) ggcggcATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCcgc > 6:394960/1‑149 (MQ=255) ggcggcATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCcgc < 4:138041/149‑1 (MQ=255) cggcATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCgt < 2:271606/149‑1 (MQ=255) cggcATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCgt > 4:377009/1‑149 (MQ=255) cggcATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCgt < 5:136819/149‑1 (MQ=255) cggcATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCgt < 8:292583/149‑1 (MQ=255) aTCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTgc > 3:141470/1‑149 (MQ=255) aTCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTgc < 6:373049/149‑1 (MQ=255) aTCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTgc > 6:396481/1‑149 (MQ=255) ccAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCCCTTCAGGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTgcgc > 8:265598/1‑149 (MQ=255) cAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGAATCCCGCCGCCGCAGGCTGTTCCAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTgcgcg > 7:295201/1‑149 (MQ=255) tACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGt < 3:238832/149‑1 (MQ=255) tACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGt > 1:144906/1‑149 (MQ=255) gcCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCCGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTg < 5:396481/149‑1 (MQ=255) tCCAGTGCGCTGATGGCTGCACCCTTCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCAACTGTCCGGGGCACTTCATACAAAATCAAATCGGCGCACCCAACGGCTTGTCCATTAACGATCCGCGTGTGCGCCCGAGGCTTTTc > 6:146925/1‑149 (MQ=255) tCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTc > 7:207415/1‑149 (MQ=255) tCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAAAAGTCGCACCCAATGGATTTTCCCTTAAAGATCCGAGTGTTCTCGCGTTGCTGTTc > 2:159046/1‑149 (MQ=255) cAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATTAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTc < 2:279505/147‑1 (MQ=255) cgTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAg < 6:380785/148‑1 (MQ=255) aGTGCGCTGATGGCTGCACCCTGCTGCGGCATCCCGCCTCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAg < 2:32013/149‑1 (MQ=255) aGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTc > 3:71895/1‑146 (MQ=255) aTGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCa < 5:381864/147‑1 (MQ=255) aTGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCAc < 3:377009/148‑1 (MQ=255) gCTTCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCTAATCCCTACTGTCCGGTGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATc < 3:89703/149‑1 (MQ=255) gCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATc < 3:139433/149‑1 (MQ=255) gCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATc < 8:207415/149‑1 (MQ=255) cagccTGCGGCGGCGGGATGCCGCCGCAGGGTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCTCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCt > 8:106914/4‑149 (MQ=255) cACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGt < 8:139680/147‑1 (MQ=255) cACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCt < 7:5010/149‑1 (MQ=255) cccTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTc < 8:231688/149‑1 (MQ=255) cccTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTc < 5:132460/149‑1 (MQ=255) cccTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTc < 6:342184/149‑1 (MQ=255) ccTGCGGCGGCGGGATGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCgt < 4:387788/109‑1 (MQ=39) ccTGCGGCGGCGGGATGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCgt > 3:387788/1‑109 (MQ=39) ccTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCTGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCg < 3:214514/149‑1 (MQ=255) ccTGCGGCGGCATCCCGCCGCCGCAGGCTGGTCGAATCCCTACTGGCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCg < 3:209436/149‑1 (MQ=255) gcggcgGCATCCCGCCGCCGCAGGCGGTACGACTCCCTACTGTCCGGGGCACCTCATGCAAAAACAAATCCGCGCACCCACGGGCTCGTCCCATAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTgg < 8:295201/149‑1 (MQ=255) cggcggCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTg < 8:101767/147‑1 (MQ=255) tCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTgg > 1:159724/1‑149 (MQ=255) | GCAAGTGGGTAACTATGGCGAAGTGTTCGAGAAGAACCTGGGCCAGAGCACTGACTTGAAGATCGACCGTGGCATGAACGCCCTGTGGAACAACGGCGGCATCCAGTACGCGCCTCCAGTGCGCTGATGGCTGCACCCTGCGGCGGCATCCCGCCGCCGCAGGCTGTTCGAATCCCTACTGTCCGGGGCACTTCATGCAAAATCAAATCGGCGCACCCAAGGGCTTGTCCCTTAACGATCCGCGTGTGCGCGCGTGGCTGTTCCAGATCCTCACGATCGTCTTCGTGGTCGGCCTGG > NC_002947/1483729‑1484025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |