| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,506,923 | A→G | 6.0% | intergenic (+44/‑73) | petC → / → sspA | ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,506,923 | 0 | A | G | 6.0% | 193.4 / 2.5 | 67 | intergenic (+44/‑73) | petC/sspA | ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A |
| Reads supporting (aligned to +/- strand): ref base A (31/32); new base G (2/2); total (33/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.53e-01 | |||||||||||
AAACTGGAAAGCCAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGCCTGGT > NC_002947/1506775‑1507066 | aaaCTGGAACGCCAGCGCATCGGCACCTATGTGGTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTa < 8:65323/149‑1 (MQ=255) aaCTGGAAAGCCAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAg < 4:130411/149‑1 (MQ=255) aaCTGGAAAGCCAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGGTGTTGAACGCGCCCGGGGTG‑GCCTAg < 4:170136/149‑1 (MQ=255) aCTGGAAAGCCAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGTACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGc < 4:381832/149‑1 (MQ=255) cAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCa < 5:378805/149‑1 (MQ=255) aGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTGGCA‑ATACTGCTAg < 6:215040/149‑1 (MQ=255) aGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAg < 5:195874/149‑1 (MQ=255) tCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTGGCA‑ATACTGCTAGGCCAcc < 1:253230/149‑1 (MQ=255) cACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCgg < 1:360484/149‑1 (MQ=255) cTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAGTACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGACAGGCCACCCCGGgcg > 5:152048/1‑149 (MQ=255) cTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCCGGGTG‑GCCGAGCA‑GTAATGCCCGGCCACCCCGGgcg > 2:111238/1‑149 (MQ=255) tATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGgcgc > 6:127142/1‑149 (MQ=255) tATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTAATTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATAACGAAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGACAGGCAACCCCGGgcgc > 1:24150/1‑149 (MQ=255) gtTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCCGGGTT‑GGCGAGCACTTTTTGCACGGCCCCCCCGGgcggggtt > 3:3375/1‑144 (MQ=255) ttGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGttca < 2:50826/148‑3 (MQ=255) tCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCTCCCGTGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTaaa < 8:274725/148‑1 (MQ=255) tCTGGCTTTCTTCTTCGTATTCCCCTACTTGCTCACGCGTTAATCCTGCACGGACGTGCACTGATCCCGCAGTAGTTGCTGGTTGTTGAACGCGCCCGGGGGG‑GCCTAGCC‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTaaa < 5:262705/148‑1 (MQ=255) ggCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTTCCAGGCCACCCCGGGCGCGTTTTCAATTAAAGTTg > 1:208987/1‑149 (MQ=255) gCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGTGCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTaaa < 1:279591/145‑1 (MQ=255) ttcttcGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAg > 3:84409/1‑148 (MQ=255) cttcGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGc < 5:127142/147‑1 (MQ=255) cttcGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCAt > 3:142329/1‑149 (MQ=255) cGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATcc < 4:84409/148‑1 (MQ=255) cGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCg > 5:214864/1‑149 (MQ=255) aTTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCCCCCCGGGCGCGGTTTCATTTAAAGTTGCACAAGCATACGTgg > 1:148920/1‑148 (MQ=255) cTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGACCGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCg < 8:343339/149‑1 (MQ=255) cTCAAGGTTGAATAGTGGAAGTACTTGCACTTTTCACTCAGTAGTTTCTGGTTGTTCAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTa < 2:208987/148‑1 (MQ=38) cTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGGG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTa < 5:296644/148‑1 (MQ=255) agggttaaTAGTGGATGGAGGTGCAGTCATCACGCAGTAGTTTGTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATgg < 2:148920/143‑1 (MQ=255) ggggacgaCTGGACGGCCGTGCACTGATCCCGCAGTAGTTGCGGGGTGGGGAACGCGCCCGGGGTG‑GCCTAGCA‑GTAGTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGgc < 8:205833/142‑1 (MQ=37) cGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGgc < 6:214864/149‑1 (MQ=255) aTACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGcaac > 3:261812/1‑149 (MQ=255) cTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGcaaccaa < 1:111238/149‑1 (MQ=255) cTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGcaaccaa > 2:57683/1‑149 (MQ=255) gAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGACCCTACATGGGCGCAACCAACAg > 3:270485/1‑149 (MQ=255) aaGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAgg < 5:14496/149‑1 (MQ=255) ggACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGt > 7:50051/1‑148 (MQ=255) gACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTGAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTa < 3:211772/149‑1 (MQ=255) gACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGt > 3:279982/1‑147 (MQ=255) aCGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAg > 7:112204/1‑149 (MQ=255) gTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGcc > 3:76888/1‑149 (MQ=255) gATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTAt > 1:4374/1‑148 (MQ=255) aTCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTc < 8:325815/149‑1 (MQ=255) aTCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTc < 8:50051/149‑1 (MQ=255) tCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTcc > 3:84920/1‑149 (MQ=255) cACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCGCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTcc < 4:84920/148‑1 (MQ=255) aCGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGa > 1:308073/1‑149 (MQ=255) cGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGAt < 1:57683/149‑1 (MQ=255) gCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATc < 2:4374/149‑1 (MQ=255) gCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATc > 2:372207/1‑149 (MQ=255) agtagtTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATccc > 4:153047/1‑149 (MQ=255) agtagtTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGGTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATccc > 1:200454/1‑149 (MQ=255) tCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGAt > 2:146329/1‑148 (MQ=255) ttgttgAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTAt > 5:274869/1‑149 (MQ=255) tgAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATtct > 8:7141/1‑148 (MQ=255) aCGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTTCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATc > 4:306560/1‑149 (MQ=255) gcCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCACGCTGATCACGATTATCATCGGGt > 6:128274/1‑149 (MQ=255) cccGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGtt < 8:112204/149‑1 (MQ=255) cccGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGtt > 3:31429/1‑149 (MQ=255) ccGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCTCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTc < 4:142329/149‑1 (MQ=255) ccGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTACGATCCCGCTGATCACTATTCTCATCGGGTTc > 2:237784/1‑149 (MQ=255) ggTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGCCt < 7:7141/149‑1 (MQ=255) tG‑GCCTAGCA‑GTCTTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGCCTgg < 8:294324/149‑1 (MQ=255) tG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCg < 2:22022/75‑1 (MQ=255) tG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCg > 1:22022/1‑75 (MQ=255) tG‑GCCTAGCA‑GTAGTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGCCTgg < 2:24150/149‑1 (MQ=255) g‑gCCTGGCA‑ATACTGCTAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATGACTATTATCATCGGGTTCGCCTGGt > 3:258192/1‑149 (MQ=39) g‑gCCTGGCA‑ATACTGCTAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGCCTGGt > 3:253219/1‑149 (MQ=255) | AAACTGGAAAGCCAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTG‑GCCTAGCA‑GTATTGCCAGGCCACCCCGGGCGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGCCTGGT > NC_002947/1506775‑1507066 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |