| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,539,270 | T→C | 8.0% | N434D (AAC→GAC) ‡ | PP_1350 ← | two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,539,270 | 0 | T | C | 8.0% | 172.1 / 3.8 | 63 | N434D (AAC→GAC) ‡ | PP_1350 | two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base T (19/38); new base C (2/3); total (22/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCGGCCTGCTGAATGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGAC > NC_002947/1539122‑1539408 | ccGGCCTGCTGAATGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGtt < 4:103308/149‑1 (MQ=255) cGGCCTGCTGAATGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTtg > 3:39181/1‑149 (MQ=255) ccTGCTGAATGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTtg‑t‑‑g > 6:233499/1‑148 (MQ=255) ccTGCTGAATGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑Gc < 5:67660/149‑1 (MQ=255) ccTGCTGAATGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑Gc < 6:249126/149‑1 (MQ=255) ccTGCTGAATGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑Gc < 6:343066/149‑1 (MQ=255) ccTGCTGAATGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑Gc < 7:142784/149‑1 (MQ=255) ctgctgAATGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCa < 2:380076/149‑1 (MQ=255) ctgAATGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACAACG‑T‑‑GCAgaa < 5:230630/149‑3 (MQ=255) aaTGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATa < 4:332411/148‑1 (MQ=255) gTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTCCTGCACAACG‑T‑‑GCAgaaca < 5:83567/142‑5 (MQ=255) gTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTCCTGCACAACG‑T‑‑GCAgaaca > 6:83567/1‑138 (MQ=255) gAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCg < 4:39181/149‑1 (MQ=255) gCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCggg < 6:175194/149‑1 (MQ=255) gCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACTGGCGTCGGCGAATGTTCTGCACAACG‑T‑‑GCAgaaca < 1:57476/128‑5 (MQ=255) gCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACAACG‑T‑‑GCAgaaca > 2:57476/1‑124 (MQ=255) aCCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑c < 8:162500/149‑1 (MQ=255) cTCGCGGCTGGCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGGTGCGCGGCAGGGCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGt < 6:293581/149‑1 (MQ=255) tCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTg > 4:161662/1‑149 (MQ=255) gcgGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTgc < 7:83836/148‑1 (MQ=255) cTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCAt > 2:23412/1‑149 (MQ=255) gTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTCTTTCGGCATGTTCCTGGTTGCGCGGCAGTTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATg > 1:81731/1‑149 (MQ=255) tCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGc < 6:222366/148‑1 (MQ=255) cAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCgg < 7:230066/149‑1 (MQ=255) gTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCggg > 2:26888/1‑115 (MQ=255) gTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCggg < 1:26888/115‑1 (MQ=255) tCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGaccacc > 3:60517/1‑148 (MQ=255) tCGTGGCCAGGGCGAAGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGACAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCATGATAGCGCCCAGCGGGTTGTTGATTTACGTGCGCCATGCCGGCAGCCAGaccacc < 1:24143/149‑1 (MQ=255) tGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCaccgacc < 5:314841/149‑1 (MQ=255) gCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCAccgaccga < 3:161662/149‑1 (MQ=255) gCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCAccgaccga < 3:119560/149‑1 (MQ=255) gCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCAATGCCGGCAGCCAGACCAccgaccga > 2:329144/1‑149 (MQ=255) cAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCgaga < 2:223061/149‑1 (MQ=255) cGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGATGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCAtt > 7:169983/1‑149 (MQ=255) aTGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCAtttt < 4:60517/149‑1 (MQ=255) ccAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCaccgac < 2:121950/133‑1 (MQ=255) ccAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTcc > 6:399232/1‑149 (MQ=255) ccAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTAG‑T‑‑TCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCaccgac > 1:121950/1‑133 (MQ=255) ggCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGAtt < 4:163043/91‑1 (MQ=255) ggCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGAtt > 3:163043/1‑91 (MQ=255) ggCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACca > 8:303167/1‑149 (MQ=255) ccTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACcat > 6:158977/1‑148 (MQ=255) ttCCTGGTTGCTCGGCAGGTCGGACGACAGGGGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACcatcat < 7:183832/147‑1 (MQ=255) ttCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCAttt > 5:161965/1‑149 (MQ=255) ttCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCAttt < 3:369126/149‑1 (MQ=255) ttCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAAAGCATTTTCTCCGATTGCACCATCAttt < 1:23412/149‑1 (MQ=255) ccTGGTTGCGCGGCAGGGCGGACGACAGGCGGCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATttc < 6:11911/148‑1 (MQ=255) cTGGTTGCGCGGCAGGTCGGACGACAGGCGACGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATttctt > 1:35652/1‑149 (MQ=255) tGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATttcttc > 5:182467/1‑149 (MQ=255) gTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATttcttc < 6:147627/147‑1 (MQ=255) gTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTcc > 1:196114/1‑148 (MQ=255) gcgcGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAAt < 2:81731/148‑1 (MQ=255) gcgGCTGGGCGGTGGAGAGTCGTCGGCGATTGTTCTGCACTTTGCTAACCCGGATAGCGCCCTGCGTGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAAt < 1:329144/149‑1 (MQ=255) tCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTg > 5:105198/1‑149 (MQ=255) cGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCCGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGAAATTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACTCTgg > 8:262823/1‑149 (MQ=255) ggACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTgg < 5:229443/148‑1 (MQ=255) gacgacAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGt < 6:105198/149‑1 (MQ=255) cAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATgt < 4:35762/149‑1 (MQ=255) aGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATgtc < 5:233499/149‑1 (MQ=255) aGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCCCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATgtc < 7:303167/149‑1 (MQ=255) gCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATgtcgt < 5:158977/149‑1 (MQ=255) ggCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGAt < 6:161965/148‑1 (MQ=255) taaTGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGa < 7:262823/148‑1 (MQ=255) gAATGTTCTGCACGTTG‑T‑‑GCAGGAAAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACg > 5:102599/1‑148 (MQ=255) aTGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCgaga > 6:254171/1‑82 (MQ=255) tCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTTGGTGATGTCGTCGATACGAATGAc < 7:242250/148‑1 (MQ=255) | CCGGCCTGCTGAATGCCGTCGAGCAGTTGCGGCACCTCGCGGCTGTCCAGGTAGCGGTTGATCGTGGCCAGGTCGATGCCCAGCTC‑TTCGGCCTGTTCCTGGTTGCGCGGCAGGTCGGACGACAGGCGTCGGCGAATGTTCTGCACGTTG‑T‑‑GCAGGATAGCGCCCAGCGGGTTGTTGATTT‑CGTGCGCCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGAC > NC_002947/1539122‑1539408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |