Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,596,813 | T→A | 5.0% | E66D (GAA→GAT) ‡ | dctD‑III ← | C4‑dicarboxylate transport transcriptional regulator |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,596,813 | 0 | T | A | 5.0% | 250.7 / 2.2 | 79 | E66D (GAA→GAT) ‡ | dctD‑III | C4‑dicarboxylate transport transcriptional regulator |
Reads supporting (aligned to +/- strand): ref base T (34/41); new base A (2/2); total (36/43) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 |
CGCAGGCTGCCCAGCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGACAGGCTCAGCCATTGCTCGA > NC_002947/1596667‑1596958 | cgcAGGCTGCCCAGCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTc > 6:104436/1‑149 (MQ=255) aGGCTGCCCAGCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAg < 8:160450/149‑1 (MQ=255) cTGCACAGCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCaa < 4:373393/149‑1 (MQ=255) cccAGCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAAt < 5:104436/147‑1 (MQ=255) cccAGCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTg > 4:80492/1‑149 (MQ=255) ccAGCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATTGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGGAGGCGTTCGAGCAATTGc < 6:200012/149‑1 (MQ=255) ccAGCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGc < 3:349689/149‑1 (MQ=255) cAGCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGACGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTg > 8:366431/1‑147 (MQ=255) aGCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAg < 3:204159/149‑1 (MQ=255) gCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAgg < 3:196513/149‑1 (MQ=255) gTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGccat < 5:221778/149‑1 (MQ=255) tCTTGCGGCGTGAAGTGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCCGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGccatc < 1:311005/149‑1 (MQ=255) tCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGACCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGccatc > 7:371687/1‑149 (MQ=255) ttGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGccatcca > 3:283647/1‑149 (MQ=255) cggcgTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGc < 6:329647/149‑1 (MQ=255) cggcgTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGA‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGc > 4:111644/1‑149 (MQ=255) cgTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCg < 3:111644/149‑1 (MQ=255) gAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGCAATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATAACGGGCAGTTCGGGGACGTACGCCTGCAGGCGTTCGACCAATTGCAGGCCTACCATGCCCgg > 1:267270/1‑148 (MQ=38) aaGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTc < 8:187432/119‑1 (MQ=255) aaGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGAAGGTCGGGGTCGTTCGCCTGCAGGCGTTc > 7:187432/1‑119 (MQ=255) aGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATg > 5:376331/1‑149 (MQ=255) aGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATg > 3:323275/1‑149 (MQ=255) gggTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTACAGGCCATCCATGCCCGGCATgc < 2:186898/149‑1 (MQ=255) ggTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATgcg > 8:231730/1‑149 (MQ=255) gTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATgcg > 3:298690/1‑148 (MQ=255) cAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGc > 6:288205/1‑149 (MQ=255) gAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCtga < 6:298951/149‑1 (MQ=255) gAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCtga > 4:167673/1‑149 (MQ=255) aGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCtgatg < 4:283647/149‑1 (MQ=255) aTAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCa < 7:7224/149‑1 (MQ=255) aGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCCTCCATGCCCGGCATGCGCACATCGCTGATGATCAcc > 3:299168/1‑149 (MQ=255) aGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCAcc > 2:14288/1‑149 (MQ=255) gCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCAccc > 3:110502/1‑148 (MQ=255) ccccGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCa < 2:267270/149‑1 (MQ=255) cccGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAg > 7:47596/1‑149 (MQ=255) cccGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAg > 7:185558/1‑149 (MQ=255) cccGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAg > 7:106452/1‑149 (MQ=255) ccGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAgg < 3:252305/149‑1 (MQ=255) c‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGtgct > 6:41054/1‑149 (MQ=255) aTGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGACATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGtgctg > 6:311219/1‑149 (MQ=255) tGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGtgctgc < 5:288205/149‑1 (MQ=255) ggCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCAt < 1:343042/111‑1 (MQ=255) ggCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCAt > 2:343042/1‑111 (MQ=255) ccGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGgtgt < 1:232257/149‑1 (MQ=255) cGCCATCGGTACATCCCCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGtgtg < 6:248964/149‑1 (MQ=255) cATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCa < 3:80492/149‑1 (MQ=255) tCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAgg < 4:110502/149‑1 (MQ=255) tCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAgg > 6:274991/1‑149 (MQ=255) aTCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCtt > 3:65105/1‑149 (MQ=255) tCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTc > 1:233318/1‑149 (MQ=255) gTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCTCGGCATGCGCACATCGCTGATGATCACCCCTGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGgcgc < 5:224160/149‑1 (MQ=255) tGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGcc < 1:145367/132‑1 (MQ=255) tGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGcc > 2:145367/1‑132 (MQ=255) aCCGGGCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCgcga < 2:337942/148‑1 (MQ=255) ccGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCgcgagc < 8:47596/149‑1 (MQ=255) cGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGACATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCgcgagcg < 5:311219/149‑1 (MQ=255) gTCAGCAGAATTACGGGCAGGCCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGaa < 7:366431/149‑1 (MQ=255) tCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGaac < 8:185558/149‑1 (MQ=255) agcagAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGaacaa < 6:376331/149‑1 (MQ=255) agAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTc < 4:298690/149‑1 (MQ=255) agAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTc > 4:223282/1‑149 (MQ=255) ggCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGaa < 8:371687/149‑1 (MQ=255) ggCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCCGaa < 5:351732/149‑1 (MQ=255) gCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCgcgagcg > 2:21585/1‑131 (MQ=255) gCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCgcgagcg < 1:21585/131‑1 (MQ=255) gCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAg > 2:123864/1‑149 (MQ=255) aGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGc > 4:258266/1‑148 (MQ=255) gTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGGGCGAGCGAACAACTCCACGCTGAAGc > 6:101087/1‑146 (MQ=255) ggggTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGGGCGAGCGAACAACTCCACGCTGAAGCCAGAc < 5:101087/148‑1 (MQ=255) ggggTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGAc < 3:167673/148‑1 (MQ=255) gggTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGACAg < 1:14288/149‑1 (MQ=255) tcgaacGCCTGCAGGCGAACGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGACAGGCt > 1:193284/6‑149 (MQ=255) tcgaacGCCTGCAGGCGAACGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGACAGGCt > 1:187235/6‑149 (MQ=255) cTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGACAGGCTCAGCCAtt > 6:290127/1‑149 (MQ=255) cTGCAGGCGAACGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGACAGGCTCAGCCAtt < 2:193284/149‑1 (MQ=255) cTGCAGGCGAACGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGACAGGCTCAGCCAtt < 2:187235/149‑1 (MQ=255) cAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGACAGGCTCAGCCATTg < 5:274991/147‑1 (MQ=255) cAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGACAGGCTCAGCCATTGCt < 8:106452/149‑1 (MQ=255) gTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGACAGGCTCAGCCATTGCTCGa > 3:48729/1‑147 (MQ=255) | CGCAGGCTGCCCAGCAAGTCTTGCGGCGTGAAGGGTTTTTCCAGGAAGTCATAGGCCCCGCTGCGC‑ATGGCTTCTACCGCCATCGGTACATCACCGTGACCGGTCAGCAGAATTACGGGCAGGTCGGGGTCGTTCGCCTGCAGGCGTTCGAGCAATTGCAGGCCATCCATGCCCGGCATGCGCACATCGCTGATGATCACCCCAGGGAAGTGCTGCGGCAGGTGTGCCAGGCACGCTTCGGCGCGAGCGAACAACTCCACGCTGAAGCCAGACAGGCTCAGCCATTGCTCGA > NC_002947/1596667‑1596958 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |