| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 163,973 | T→A | 5.0% | intergenic (‑140/+47) | scpC ← / ← pntB | propionyl‑CoA:succinate CoA transferase/pyridine nucleotide transhydrogenase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 163,973 | 0 | T | A | 5.0% | 304.3 / 4.8 | 99 | intergenic (‑140/+47) | scpC/pntB | propionyl‑CoA:succinate CoA transferase/pyridine nucleotide transhydrogenase subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (51/43); new base A (2/3); total (53/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.31e-01 | |||||||||||
TGGATTGTTATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATA > NC_002947/163833‑164121 | tGGATTGTTATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCg < 4:8137/149‑1 (MQ=255)tGGATTGTTATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCg > 7:188640/1‑149 (MQ=255) gATTGTTATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGGTCAGAATCTgccgg < 7:332002/148‑5 (MQ=255) gATTGTTATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGGTCAGAATCTG‑CCggg < 7:139287/149‑1 (MQ=255) gATTGTTATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCggg < 7:195215/149‑1 (MQ=255) gATTGTTATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCgg < 6:54475/148‑1 (MQ=255) gATTGTTATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTAGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCggg < 1:44034/149‑1 (MQ=255) ttATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGGTTCTGACCGGGGCTTc < 2:118588/149‑1 (MQ=255) ttATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTc > 7:63292/1‑149 (MQ=255) tATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTcc > 3:108590/1‑149 (MQ=255) gggCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGGTCAGAATCTG‑CCGGGGCttttctt < 3:277467/146‑6 (MQ=255) gggCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTtat < 6:91642/148‑1 (MQ=255) gggCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTtat < 3:383001/148‑1 (MQ=255) ggCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTatat < 8:63292/149‑1 (MQ=255) gCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTatat > 2:350093/1‑148 (MQ=255) tACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCtt > 7:72170/1‑141 (MQ=255) tACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCtt < 8:72170/141‑1 (MQ=255) tACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTatat > 5:356241/1‑146 (MQ=255) aCTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGc > 2:223691/1‑149 (MQ=255) cTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCATTAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCt > 4:26765/1‑149 (MQ=255) cTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCt > 7:361704/1‑149 (MQ=255) cTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGCTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCGTTTATATCAGCt > 7:169058/1‑149 (MQ=255) aaaCTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACAGGGGCTTCCTTTATATCAGCTGGt > 5:204880/1‑149 (MQ=255) actactGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGttt < 8:65548/149‑1 (MQ=255) tactGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTg > 8:232784/1‑148 (MQ=255) tGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGc > 6:252220/1‑149 (MQ=255) aGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGc > 3:390264/1‑149 (MQ=255) gcAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTgg < 7:30472/149‑1 (MQ=255) cAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGgt < 6:356241/149‑1 (MQ=255) cAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGgt > 3:337250/1‑149 (MQ=255) aGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGgtg > 5:399948/1‑149 (MQ=255) aGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGgtg > 1:178048/1‑149 (MQ=255) tCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGgtgt > 1:144204/1‑148 (MQ=255) tAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCAc > 3:270235/1‑149 (MQ=255) agagATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGtt < 8:143517/130‑1 (MQ=255) agagATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGtt > 7:143517/1‑130 (MQ=255) aTTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGCCCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCAc > 8:275100/1‑149 (MQ=255) tttCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCAc < 4:270235/148‑1 (MQ=255) cGCCCATTGCCGGCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGc < 8:269776/148‑1 (MQ=255) gCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGcc < 4:390264/148‑1 (MQ=255) ccATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCtt > 5:13352/1‑148 (MQ=255) ccATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCtt > 4:116069/1‑148 (MQ=255) ccATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCCCCTTg > 6:326366/1‑149 (MQ=255) ccATTGCCGTCCCACCAACATGCTCGTATGAGAAGACTTGTATTTGAGACGTTGATCCGGATCAATAAAAGAAAACCCCCGC‑CACATTCTGACCGGCCGATCCATTATATCAGAAGCTTTGCACCGGCAGGTCTCACTCCACCGcc > 6:344843/1‑146 (MQ=255) aTTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGAc < 4:108590/149‑1 (MQ=255) ccGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCAt < 8:361704/148‑1 (MQ=255) ccGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATg > 5:265528/1‑149 (MQ=255) gTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCgg < 5:349325/88‑1 (MQ=255) gTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCgg > 6:349325/1‑88 (MQ=255) tCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCTACCGCCTTGACCATGTcc < 8:188640/149‑1 (MQ=255) cACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGcc < 4:347690/134‑1 (MQ=255) cACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTc > 8:321133/1‑148 (MQ=255) gACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCTCTCCACCGCCTTGACCATGTCCTCGATg < 1:223691/149‑1 (MQ=255) aCCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCAACGCCTTGACCATGTCCTCGATGa > 8:153572/1‑149 (MQ=255) cATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGAcc < 3:116069/149‑1 (MQ=255) ggTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACcttc > 2:104410/1‑149 (MQ=255) ggTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGAGGCTGGTGTCACTCCACCGCCTTGACAATGTCCTCGATGACctcg > 6:81897/1‑147 (MQ=255) gTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTgg > 4:224685/1‑149 (MQ=255) gTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTg < 5:252220/148‑1 (MQ=255) tATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGc < 6:265528/149‑1 (MQ=255) gagaAGCCTTGTATTTTAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCAc < 7:173742/108‑1 (MQ=255) gagaAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCACCGG‑CAGATTCTGACCGGGGCTTCCTTTATATAAGCTGGTTTGCAGCGGATGGTTTCAc > 8:173742/1‑108 (MQ=255) gaAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCa < 6:204880/148‑1 (MQ=255) aGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCg < 8:169058/149‑1 (MQ=255) ttGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCgggg > 5:18694/1‑61 (MQ=255) ttGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCgggg < 6:18694/61‑1 (MQ=255) ttGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTg > 4:51270/1‑112 (MQ=255) ttGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTg < 3:51270/112‑1 (MQ=255) ttGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAaca > 2:60409/1‑149 (MQ=255) tttGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACcat > 7:98035/1‑148 (MQ=255) tGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACcatca < 2:178048/148‑1 (MQ=255) gAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATg > 1:321330/1‑149 (MQ=255) tCGTTGATCCGGATCAATAAAAGAAAAGCCGCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTc < 5:326366/149‑1 (MQ=255) tCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTc < 7:232784/149‑1 (MQ=255) ttGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTg > 5:90392/1‑149 (MQ=255) gATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTc > 6:83561/1‑149 (MQ=255) tCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTcc < 4:337250/148‑1 (MQ=255) cggtgcAATAAAAGAAAAGCCCAGG‑GAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATCACCTTCTTGGCGTCACCGAACAGCATCATGGTCTTGTCCAGa < 6:396622/144‑1 (MQ=255) ggttCAATAAAAGAAAAGCGCCGG‑CTGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACAGCATCATGGTCTTGTCCAGAt < 6:13352/146‑1 (MQ=255) ggATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGa > 3:63142/1‑148 (MQ=255) aaTAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGaa < 3:223309/148‑1 (MQ=255) aaTAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGaa < 6:399948/148‑1 (MQ=255) tAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAg > 2:383439/1‑149 (MQ=255) tAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTACCTTTATATCAGAAGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGACCTCGATGACCTTCTTGGCGTCACCCAACACCATCATGGTCTTGTCCAGATAGAACAg > 1:244011/1‑149 (MQ=255) aaaagaaaagCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCGCCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGt > 1:376588/1‑149 (MQ=255) aaaagaaaagCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGt > 6:354275/1‑149 (MQ=255) aaagaaaagCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGt < 1:350093/148‑1 (MQ=255) aagaaaagCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTc > 5:150462/1‑149 (MQ=255) agaaaagCCCCGG‑CAGATTCTGTCCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCg < 7:321133/149‑1 (MQ=255) agaaaagCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCg > 3:269053/1‑149 (MQ=255) gaaaagCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGt > 5:49417/1‑149 (MQ=255) gaaaagCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGt > 5:185446/1‑149 (MQ=255) gCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTcc < 7:275100/149‑1 (MQ=255) gCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTc > 6:239427/1‑148 (MQ=255) ccccGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTc > 7:14999/1‑147 (MQ=255) cccggtcAGAATCTG‑CCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAg > 7:304888/7‑149 (MQ=255) ccggtcAGAATCTG‑CCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAgg > 2:89504/6‑149 (MQ=255) cAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCgg < 2:144204/149‑1 (MQ=255) aGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGc < 5:83561/149‑1 (MQ=255) ttCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATa < 3:26765/149‑1 (MQ=255) | TGGATTGTTATCTCGGGCTACTGAAACTACTGCAGCGCAGTCTAGAGATTTCGCCCATTGCCGTCCCACGACCATGGTCGTATGAGAAGCCTTGTATTTGAGTCGTTGATCCGGATCAATAAAAGAAAAGCCCCGG‑CAGATTCTGACCGGGGCTTCCTTTATATCAGCTGGTTTGCAGCGGCTGGTGTCACTCCACCGCCTTGACCATGTCCTCGATGACCTTCTTGGCGTCACCGAACACCATCATGGTCTTGTCCAGATAGAACAGTTCGTTGTCCAGGCCGGCATA > NC_002947/163833‑164121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |