| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,628,637 | C→A | 7.1% | V49V (GTC→GTA) | mucB → | sigma factor AlgU regulator MucB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,628,637 | 0 | C | A | 7.1% | 218.3 / 6.4 | 71 | V49V (GTC→GTA) | mucB | sigma factor AlgU regulator MucB |
| Reads supporting (aligned to +/- strand): ref base C (37/29); new base A (2/3); total (39/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.47e-01 | |||||||||||
TCATGCGCGCGCTACCTCTCTTGTCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAATGTGTCAGCGGGGCCTTG > NC_002947/1628489‑1628784 | tCATGCGCGCGCTACCTCTCTTGTCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGGCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTc > 1:124375/1‑149 (MQ=255)tCATGCGCGCGCTACCTCTCTTGTCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTc < 4:19205/149‑1 (MQ=255)tCATGCGCGCGCTACCTCTCTTGTCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTc < 2:41072/149‑1 (MQ=255) cgcTACCTCTCTTGTCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTAGACGAACga < 6:152400/149‑2 (MQ=255) cTACCTCTCTTGTCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGCGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCaa > 3:190237/1‑149 (MQ=255) tACCTCTCTTGTCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCGTGACGCGAGTCAGTGGCTGCACAAGCTGGCACAGGCCGAGCAAAAACAGAGCGATCAAGGG‑TCGTTCGTCTACGACCGCAAc > 7:263091/1‑149 (MQ=255) ccTCTCTTGTCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACgg > 5:156111/1‑149 (MQ=255) ccTCTCTTGTCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTAGACGAACgaccc < 1:231699/147‑5 (MQ=255) ttGTCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGttt > 4:253386/1‑149 (MQ=255) tCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTtctc < 1:5507/149‑1 (MQ=255) gctgATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTccc > 8:145650/1‑149 (MQ=255) gctgATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTAGACGAACgac > 8:277537/1‑129 (MQ=255) gctgATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTAGACGAACgac < 7:277537/131‑3 (MQ=255) gATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCAc > 4:230329/1‑148 (MQ=255) aTTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGa > 5:210112/1‑149 (MQ=255) gCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATc > 4:349155/1‑149 (MQ=255) gCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATc > 6:315269/1‑149 (MQ=255) gCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCTAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTgg < 4:61042/149‑1 (MQ=255) gCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTgg < 2:203816/149‑1 (MQ=255) gCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGAGATCTGGccc > 4:109599/1‑147 (MQ=255) cATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGca < 5:165254/147‑1 (MQ=255) cATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGca > 6:83922/1‑147 (MQ=255) tGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTcgac < 4:167741/149‑1 (MQ=255) cATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACgg > 7:78211/1‑148 (MQ=255) ggcggcCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGGCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAg < 7:5795/148‑1 (MQ=255) aaTTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCagc > 3:34171/1‑147 (MQ=255) cttcGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCagcgagcg < 8:189525/148‑1 (MQ=255) cttcGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCagcgagcg < 5:315269/148‑1 (MQ=255) ttcGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAg < 3:4305/136‑1 (MQ=255) ttcGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAg > 4:4305/1‑136 (MQ=255) cTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCa < 2:307979/135‑1 (MQ=255) cTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCa > 1:307979/1‑135 (MQ=255) cTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTg > 7:230960/1‑149 (MQ=255) tGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTg > 1:282216/1‑148 (MQ=255) gAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTAGCCTCCCACGACATCTGGCACAGGGTCGACGACGGAAAGGTCAGCGAGCGGGTTTTg > 8:295761/1‑147 (MQ=255) aGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAg < 8:78211/149‑1 (MQ=255) cGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCtt > 7:360503/1‑149 (MQ=255) gagtgGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATgg > 7:229487/1‑149 (MQ=255) gtgGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGgcg > 8:212385/1‑149 (MQ=255) gtgGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGgcg > 7:102479/1‑149 (MQ=255) tgGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGgcgc < 3:230329/149‑1 (MQ=255) cTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGcgccgc < 6:156111/149‑1 (MQ=255) aaCAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCgccgcc > 7:4485/1‑147 (MQ=255) aCAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAg > 7:103245/1‑149 (MQ=255) aaGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGgcgc > 1:25786/1‑140 (MQ=255) aaGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGgcgc < 2:25786/140‑1 (MQ=255) gCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCtcctcc < 6:102489/73‑1 (MQ=255) gCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCtcctcc > 5:102489/1‑73 (MQ=255) tGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATc > 5:306446/1‑149 (MQ=255) gCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATc < 8:229487/147‑1 (MQ=255) gCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATc < 6:210112/147‑1 (MQ=255) acaGGCCGAGCAAAAACAGAGCTATCAAGGGATCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTg > 1:42148/1‑149 (MQ=255) gCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCgg < 5:346281/108‑1 (MQ=255) gCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCgg > 6:346281/1‑108 (MQ=255) gCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGt < 4:34171/149‑1 (MQ=255) cGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTg > 2:261852/1‑148 (MQ=255) gCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATg < 3:253386/149‑1 (MQ=255) aaaCAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATgga > 4:291147/1‑146 (MQ=255) aaaCAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCaa < 4:269352/149‑1 (MQ=255) agagCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGAAAGGTCAGCGAGCGGCTGTTGCAGCGTGATGGCGCCGCCCAGGAACTCGTGCGCGGGGATGGCAAGGTg > 8:271686/1‑149 (MQ=255) gCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGaa < 7:295761/149‑1 (MQ=255) cTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGAGGGCAAGGTCAGCGAGCGGCt > 7:183144/1‑93 (MQ=255) cTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCt < 8:183144/93‑1 (MQ=255) cTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAAt < 2:42148/149‑1 (MQ=255) tATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAAtg > 5:364366/1‑149 (MQ=255) tCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGTCGCCGCCCAGGAAATCGTGCGCGTTGATGGCAAGGTTGAAtgtg < 8:103245/149‑1 (MQ=255) tCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAAtgtg > 7:348066/1‑149 (MQ=255) aaGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAATgtgt < 1:261852/148‑1 (MQ=255) aGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAATGTGTCa < 7:212385/149‑1 (MQ=255) gttgcgttcgtAGACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAATGTGTCAg > 2:392512/5‑149 (MQ=255) gg‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAATGTGTCAGc < 8:360503/149‑1 (MQ=255) ttcgtCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAATGTGTCAGCGGGGc > 6:278823/1‑149 (MQ=255) ttcgtCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAATGTGTCAGCGGGGc > 6:125102/1‑149 (MQ=255) tCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAATGTGTCAGCGGGGCCTTg < 7:145650/149‑1 (MQ=255) | TCATGCGCGCGCTACCTCTCTTGTCGCTGCTGATTGGCAGCTGCATGACGGTGCCAGCATTGGCGGCCAATTCTTCGCCTGAGGCGAGTGAGTGGCTGAACAAGCTGGCACAGGCCGAGCAAAAACAGAGCTATCAAGGG‑TCGTTCGTCTACGAACGCAACGGCAGTTTCTCCTCCCACGACATCTGGCACAGGGTCGACGACGGCAAGGTCAGCGAGCGGCTGTTGCAGCTTGATGGCGCCGCCCAGGAAATCGTGCGCGTGGATGGCAAGGTGGAATGTGTCAGCGGGGCCTTG > NC_002947/1628489‑1628784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |