| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,667,913 | G→T | 5.4% | E305D (GAG→GAT) | ffh → | signal recognition particle GTPase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,667,913 | 0 | G | T | 5.4% | 263.4 / 3.6 | 83 | E305D (GAG→GAT) | ffh | signal recognition particle GTPase subunit |
| Reads supporting (aligned to +/- strand): ref base G (41/37); new base T (2/3); total (43/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.59e-01 | |||||||||||
GGTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGATGGAC > NC_002947/1667767‑1668054 | ggTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCa < 5:317154/149‑1 (MQ=255) gTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAg < 1:178534/149‑1 (MQ=255) tgctgcGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAgg > 6:342085/1‑149 (MQ=255) tgctgaGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGTTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATCGGCGACGTGCTCAGCCTGATCGAGCatg > 7:39275/1‑147 (MQ=255) ctgcGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCGGCCTGCTCGATCAGGct < 6:219232/149‑2 (MQ=255) cgcTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGa < 3:76880/148‑1 (MQ=255) tCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGATAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGTCTGATCGAGCAGGCCGAGCAGa < 7:247508/148‑1 (MQ=255) cGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGAGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCGGCCTGCTCGATCAGGCTGAGCacgtc < 7:255047/149‑5 (MQ=255) gCAATCACCGGCAAACCGATCAAGTTCAACGGTATGGGGGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGACGCTTCGAGCATCCTCGTCATGGGCCAAGTGCTCAGCCAGATACAGCAGGCCGAGCAGACCAACGAcaa > 1:326021/1‑149 (MQ=255) aaTCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGAcaagg < 7:265816/149‑1 (MQ=255) tCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGAcaaggc > 7:265544/1‑148 (MQ=255) tCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGAcaaggc > 8:20796/1‑148 (MQ=255) aCCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGAcaaggcc > 4:381744/1‑147 (MQ=255) cGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCCCCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGAcaaggccaagg < 8:138342/149‑1 (MQ=255) cGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGTGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGAcaaggccaagg < 8:3752/149‑1 (MQ=255) cGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGAcaaggccaagg > 3:131046/1‑149 (MQ=255) acccataCCGATGAACTTGATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACTTGCTCAGCCTGATCGAGCAGCCCGAGCAGACCATCGAcaaggccaagg > 8:344285/7‑149 (MQ=255) ccataCCGATGAACTTGATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACaaggccaaggcc > 3:323349/5‑149 (MQ=255) ccataCCGATGAACTTGATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACaaggccaaggcc > 5:72132/5‑149 (MQ=255) cAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCGCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑g < 4:249035/149‑1 (MQ=255) aTCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCt > 8:225942/1‑149 (MQ=255) aaGTTCATCCCAATCGCTGAGAAGACCGAGGCCCTCGACCCGATCCACCCCGACCGCCTCGCTTACCGCATCCTCGGCATGGGCGACGTGCTCAGCCAGATCGAGCAGGCCGAGCAGACCATCGACAAGCCCAAGGAC‑GA‑CTAGCTCGc > 2:142844/1‑149 (MQ=255) gTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGcc > 7:299293/1‑148 (MQ=255) gTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGcc > 8:154746/1‑148 (MQ=255) gTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGcc > 3:270610/1‑148 (MQ=255) tCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGcc > 3:118436/1‑146 (MQ=255) gTATGGGTGAGAAGCCCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACt > 6:86708/1‑148 (MQ=255) ggTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTgaagaa < 7:225942/149‑1 (MQ=255) ggTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTgaagaa < 5:342085/149‑1 (MQ=255) gTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGaagaag < 4:267893/149‑1 (MQ=255) agaagaCCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGaaggg > 7:255580/1‑148 (MQ=255) aagaCCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGaagggcaa < 7:20796/149‑1 (MQ=255) aagaCCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGaagggc > 5:274816/1‑147 (MQ=255) aagaCCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGaagggc > 5:322520/1‑147 (MQ=255) gaCCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGaagggcaagg < 2:212975/149‑1 (MQ=255) gaCAGAGGCCCTCGATCCGTTCCAGCCCGACCGCGTCGCTTCGCTCATGCTGGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCAAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGaagggcaagg < 8:39275/149‑1 (MQ=255) cGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCt > 7:154937/1‑149 (MQ=255) cGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCt > 6:269126/1‑149 (MQ=255) aGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTc < 6:248785/149‑1 (MQ=255) gCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGa < 4:131046/149‑1 (MQ=255) cccTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGAc < 7:154746/149‑1 (MQ=255) tCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTc > 8:35336/1‑149 (MQ=255) aGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCTAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGaa < 8:265544/149‑1 (MQ=255) ccGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGa < 4:156351/149‑1 (MQ=255) cGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGAc < 6:274816/149‑1 (MQ=255) ttCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACACGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGATGACtt > 5:278857/1‑149 (MQ=255) tcACCCCGACCGCCTCGCTTCGCGGATCCTGGGGATTGGCGACGGGCTCATGCTGATCGATCAGGCCGAGCAGACCATCGAAAATGGCAAGGCCAGA‑CAAGCTGGCCAAGAAACTGAAGaagg < 1:223536/122‑1 (MQ=255) ccACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTcc > 4:297679/1‑149 (MQ=255) ccACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTcc > 7:202199/1‑149 (MQ=255) ccACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTc < 5:86708/148‑1 (MQ=255) ccACCCCGACCGCGTCGCTTCGCGAATCCTCGGCATGGGCGACGTGCTCAGCCTGATCTAGCAGGCCGAGCAGACCATCGCCAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGaagg > 2:223536/1‑122 (MQ=255) ccccGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCcgcg > 7:158267/1‑149 (MQ=255) ccGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGAc < 8:299293/149‑1 (MQ=255) gACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGAc > 4:74843/1‑147 (MQ=255) gACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCa < 6:322520/149‑1 (MQ=255) gcgcATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATg < 4:323349/148‑1 (MQ=255) gcgcATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGCCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATg < 6:72132/148‑1 (MQ=255) cgcATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATgaa < 3:297679/149‑1 (MQ=255) cgcATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATgaa < 5:269126/149‑1 (MQ=255) aTCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATgaagaa < 5:236849/149‑1 (MQ=255) tCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATg > 5:83136/1‑149 (MQ=255) tCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATg > 7:78541/1‑149 (MQ=255) aTGTGCGACTTTGTCAGACTTATCGAGAATGAGGAGCAGACCATCGACAAGTCCAAGGAC‑GA‑AAAGCTTGCCAAGAAACTTAATAATGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGggcg < 7:344285/148‑1 (MQ=255) tGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGggcggc > 5:397438/1‑149 (MQ=255) gCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTc > 5:83161/1‑149 (MQ=255) tGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGCCTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCggcggc > 2:252274/1‑149 (MQ=255) tGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGATCATGGGCGTCCTCggcggc < 8:202199/149‑1 (MQ=255) tGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCggcggc < 6:83161/149‑1 (MQ=255) cTCGGCCTGCTCGATCAGGCTGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCt > 3:231273/1‑149 (MQ=255) cTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCt < 5:289878/149‑1 (MQ=255) cTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCt < 8:158267/149‑1 (MQ=255) cggCCTGCTCGATCAGGCTGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGa > 3:337009/3‑149 (MQ=255) cAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTgca < 5:234501/114‑1 (MQ=255) cAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTgca > 6:234501/1‑114 (MQ=255) aGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGAt < 8:154937/149‑1 (MQ=255) gCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGCGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGATg < 4:270610/149‑1 (MQ=255) ccTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTcggc > 7:240426/1‑139 (MQ=255) ccTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTcggc < 8:240426/139‑1 (MQ=255) ccTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGATg > 7:113793/1‑148 (MQ=255) gATCGAGCAGGCCGAGCAGCCCATCGACAAGGCCAAGGCC‑GAGCAAGCTTGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGAACTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCCGCCTGATGGa > 1:273743/1‑148 (MQ=255) aTCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGATGGAc > 8:132819/1‑147 (MQ=255) aTCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGATGGAc > 7:361909/1‑147 (MQ=255) aTCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGATGGAc > 5:154306/1‑147 (MQ=255) | GGTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGAGCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGACAAGGCCAAGGCC‑GA‑CAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGATGGAC > NC_002947/1667767‑1668054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |