| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,825,091 | G→C | 7.5% | R55G (CGC→GGC) | mutS ← | DNA mismatch repair protein MutS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,825,091 | 0 | G | C | 7.5% | 201.5 / 2.8 | 70 | R55G (CGC→GGC) | mutS | DNA mismatch repair protein MutS |
| Reads supporting (aligned to +/- strand): ref base G (28/34); new base C (4/2); total (32/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CACCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGGTGTGT > NC_002947/1824945‑1825236 | cACCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCgcgg < 5:182008/148‑1 (MQ=255)cACCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACAGACTCGCCGAGCTTGACCAGCTAGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCgcggg > 7:297532/1‑149 (MQ=255) cGGGCCCTTGCTGGTGGAGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCgcgcgcgg > 5:127478/1‑149 (MQ=255) gCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCa < 6:345424/149‑1 (MQ=255) cacTTGCTGGTCGCGGGGTAGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCCGCCGGTCAg > 6:399502/3‑149 (MQ=255) cTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAggg > 6:380151/1‑149 (MQ=255) cTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCCCGCGGTCAgtc < 2:192704/149‑3 (MQ=255) ttGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACAAGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGt > 7:85870/1‑149 (MQ=255) tGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTg > 5:205602/1‑149 (MQ=255) tggtggCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCAAATGGGGATGGACTGGCCGGCCGACTGCACGCCGGCGGTCACGGTGat > 8:343835/1‑148 (MQ=255) gtggCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATc > 8:173525/1‑149 (MQ=255) gtggCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATc < 2:205537/149‑1 (MQ=255) ggggTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGgtataccg > 2:332670/1‑143 (MQ=255) ccGATCTGCTCACAGATCACCACCGACTCGCCGATCTTGACCAGCTTGGCCAGG‑TATCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTTATATCCAGCAGTTTcgc < 8:297532/149‑1 (MQ=255) gCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCttt > 3:322413/1‑149 (MQ=255) cTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTcgcg < 6:205602/142‑1 (MQ=255) cTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTcgcg < 7:337465/142‑1 (MQ=255) cTCACAGATCACCACCGACTAGACGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGTGGATGGACTGGCCGGCCGACTGACCGCTGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCttt < 5:366580/148‑1 (MQ=255) tCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCttttt > 5:293934/1‑149 (MQ=255) tCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCtttt > 4:252665/1‑148 (MQ=255) agcaGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTc < 6:182231/147‑1 (MQ=255) acaGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTc < 2:79900/148‑1 (MQ=255) acaGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCg > 5:91032/1‑149 (MQ=255) acaGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGCGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCg > 3:333198/1‑149 (MQ=255) accaccGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTc < 1:286439/149‑1 (MQ=255) ccaccGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATTTCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCg > 6:159088/1‑149 (MQ=255) caccGACTCGCCGAGCTTGACCAGCTTGGCCAGGTTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCg > 1:57956/1‑149 (MQ=255) caccGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGt > 1:317053/1‑149 (MQ=255) accGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTa < 5:159088/149‑1 (MQ=255) gACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTagaa < 3:107687/149‑1 (MQ=255) cGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCTACGAAGAtgcga < 4:333198/149‑5 (MQ=255) aGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATc > 6:93828/1‑131 (MQ=255) aGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATc < 5:93828/131‑1 (MQ=255) cTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCTGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAg > 7:365525/1‑148 (MQ=255) gACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGaa < 7:173525/147‑1 (MQ=255) gACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGt > 2:40500/1‑149 (MQ=255) gACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGt > 6:99568/1‑149 (MQ=255) gACCAGCGTGGCCAGG‑TAGCCTTCCAGCGAGTGGATCGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTCGCATCTTCGTAGAAGATCTCGTAGAAGt < 8:305464/148‑1 (MQ=255) caccTTGCCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGCCTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGc < 2:284041/146‑1 (MQ=255) cAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGc < 4:384197/149‑1 (MQ=255) cAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGc < 1:40500/149‑1 (MQ=255) ggCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATg < 5:380151/148‑1 (MQ=255) ccAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTTACCGCGGGCGGTCAGGGTGATATCAAGCAGTTTACCGGCCATTTTCGCATAATATTAGAACCTCTCGTAGAAGTCGCCCAttccg > 8:316259/1‑145 (MQ=255) caaGG‑TAGCCTTCCAGCGAATGTAACGGTATCCCGCACATGGGGATGTACTGGCCGGGCGACTGACAGCGGGCTGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCgg < 5:399502/147‑1 (MQ=255) gCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAAc < 3:252665/148‑1 (MQ=255) ttCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGCCCGCGGGCGGGCAGGGTGATCTCCAGCAGTTTCGCGGCCTGTTTCGCATCTTCGTAGACGATCGCGTAGAAGTCGCCCATGCGGTAGCACAt > 2:48789/1‑147 (MQ=255) ccAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCa < 2:317053/147‑1 (MQ=255) gCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTgg > 7:112171/1‑149 (MQ=255) gCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTgg < 7:316259/149‑1 (MQ=255) tGGAACGTAATCCAGCACATGGGGATGGACTGGCCGGCCGACTGACCGCTGGCGGTCAGGGTTATATCCAGCAGGTTCGCGGCCTTTTTCGCATCTTCGTAGAATATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCgg < 7:343835/149‑1 (MQ=255) gcaCGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGAAATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCggg < 6:206512/146‑1 (MQ=255) gAACGGAATCCCGCACATGCGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCCTGCGGTAGAACATCAGCTGGTCCGGGt < 1:212686/149‑1 (MQ=255) aaCGGAATCCTGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCt > 6:261436/1‑93 (MQ=255) aaCGGAATCCTGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCt < 5:261436/93‑1 (MQ=255) ggAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTg < 4:322413/149‑1 (MQ=255) tCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGttt > 1:12919/1‑149 (MQ=255) ccGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGttttt < 5:99568/149‑1 (MQ=255) cGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCgg > 6:140901/1‑136 (MQ=255) cGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCgg < 5:140901/136‑1 (MQ=255) cGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTc < 8:112171/149‑1 (MQ=255) ggACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTc > 4:340315/1‑142 (MQ=255) ggACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTc < 3:340315/142‑1 (MQ=255) aCTGTCCGGCCGACTGACCGCGGGCTGTCAGGGGGATATCCAGCAGTTTCGAGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCTCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTActgc < 6:127478/149‑1 (MQ=255) cTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTActgct < 2:57956/149‑1 (MQ=255) tGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTActgctg > 3:147924/1‑149 (MQ=255) gccggccgACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGca > 6:150655/1‑149 (MQ=255) ccgACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCatcatc > 2:89147/1‑149 (MQ=255) ccTGACCGCCCGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGCAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTc < 6:346838/121‑1 (MQ=255) ccTGACCGCCCGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGCAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTc > 5:346838/2‑122 (MQ=255) aCTGCCCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGAATATACGTAGAAAATCTCGAAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCggg > 5:271661/1‑149 (MQ=255) cTGACCGCCCGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTGTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCgggg > 1:280351/1‑149 (MQ=255) aCCGCGGGCGGTCAGGGTGATATCCAGCAGATTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGgt < 8:85870/147‑1 (MQ=255) aCCGCGGGCGGTAAGGGTGATATCCAGCAGTGTAGCGGCCTTTTTCGCATCTTCGTATAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGgtg < 8:158303/148‑1 (MQ=255) cgcgGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGgtgtgt > 7:327184/1‑149 (MQ=255) | CACCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGG‑TAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGGTGTGT > NC_002947/1824945‑1825236 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |