| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,886,602 | C→T | 7.1% | D423D (GAC→GAT) | rmuC → | DNA recombination limiting inversions protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,886,602 | 0 | C | T | 7.1% | 207.4 / 3.5 | 70 | D423D (GAC→GAT) | rmuC | DNA recombination limiting inversions protein |
| Reads supporting (aligned to +/- strand): ref base C (30/35); new base T (3/2); total (33/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.90e-01 | |||||||||||
TGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTG > NC_002947/1886454‑1886749 | tGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGAc > 7:37139/1‑149 (MQ=255) tGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGaa > 6:25214/1‑148 (MQ=255) tGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGaa < 5:25214/148‑1 (MQ=255) gTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAAc < 1:377938/148‑1 (MQ=255) tCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTg > 5:324932/1‑149 (MQ=255) tCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTg > 5:214827/1‑149 (MQ=255) tCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTg > 3:171499/1‑149 (MQ=255) aGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTggg > 8:260349/1‑149 (MQ=255) aGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTggg < 3:266141/149‑1 (MQ=255) aGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTgg < 1:139486/148‑1 (MQ=255) aGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTgg < 1:222149/148‑1 (MQ=255) ccTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAg < 6:215660/149‑1 (MQ=255) cTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGc < 3:254225/149‑1 (MQ=255) tACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGcc > 8:340518/1‑149 (MQ=255) tACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATAGTGGGGGTGGCCGGGAGGATGGAACTACGCCAAGTTCGTGATGT‑TCAACAAGAACCGGGCCGAAATggg > 1:324961/1‑148 (MQ=255) ccACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGc < 6:324932/149‑1 (MQ=255) cGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTg < 4:89897/149‑1 (MQ=255) ttGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCACTTg > 7:281771/1‑147 (MQ=255) gCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGt > 7:331492/1‑149 (MQ=255) ccACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTg < 7:340518/149‑1 (MQ=255) cGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAgg < 6:214827/148‑1 (MQ=255) aTCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATg < 3:122802/148‑1 (MQ=255) tCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCg > 1:118850/1‑149 (MQ=255) cGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAgg > 6:152747/1‑131 (MQ=255) cGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAgg < 5:152747/131‑1 (MQ=255) aGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCtg < 8:331492/149‑1 (MQ=255) ggAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCtgt < 7:5749/149‑1 (MQ=255) gTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGaa < 5:278951/149‑1 (MQ=255) gTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGaa < 2:149501/149‑1 (MQ=255) tCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGCCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAg > 1:355192/1‑149 (MQ=255) aaGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAggg > 6:54179/1‑149 (MQ=255) gggCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCGTCCAGGTCCTGGATGAAca < 1:75824/83‑2 (MQ=39) gggCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCGTCCAGGTCCTGGATGAAca > 2:75824/1‑82 (MQ=39) gggCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCg > 1:368816/1‑149 (MQ=255) ggCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGt < 2:324961/149‑1 (MQ=255) cGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAAcc < 7:260349/149‑1 (MQ=255) cccGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTg < 8:37139/149‑1 (MQ=255) ccGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTgg < 4:142828/149‑1 (MQ=255) gcgAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAgcg < 1:82332/113‑1 (MQ=255) gcgAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAgcg > 2:82332/1‑113 (MQ=255) gAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAg < 2:368816/149‑1 (MQ=255) gCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGTAACATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGCCAGCGCGCAACAAGCTGTGCGAAGGGCGTGCCAACCGGGTTTGCCGTAGCGagcagc > 1:42193/1‑149 (MQ=255) cc‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCt > 4:370692/1‑148 (MQ=255) c‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCtt > 4:202717/1‑148 (MQ=255) ctctACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAgctgct < 2:115650/149‑1 (MQ=255) tctACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGctgctg > 8:270766/1‑149 (MQ=255) tACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCACTTGCAGCAGGTGGACAATGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGctgctg < 8:281771/147‑1 (MQ=255) gACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGc > 4:358876/1‑96 (MQ=255) gACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGgcgc > 2:95177/1‑149 (MQ=255) aCAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGcc > 8:272961/1‑149 (MQ=255) cAAGTTCGTGCTGT‑TCCTCCAGGACCTGGACGAACTGGGCAGCCGCGTGCAGCAGGGGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGGTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGccc < 2:42193/149‑1 (MQ=255) cAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGccc < 5:54179/149‑1 (MQ=255) aGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGt < 4:171499/149‑1 (MQ=255) ttCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGc < 3:370692/149‑1 (MQ=255) tGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGc < 7:2201/149‑1 (MQ=255) gCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGc > 2:39322/1‑148 (MQ=255) agT‑TCGTCCAGGTCCTGGATGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGc > 5:213977/2‑146 (MQ=255) t‑tCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAagag > 2:288094/1‑149 (MQ=255) t‑tCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAaga < 1:95177/148‑1 (MQ=255) aTCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCt < 1:271270/148‑1 (MQ=255) gtccTGGATGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGag < 7:180641/103‑1 (MQ=255) gtccTGGATGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGag > 8:180641/3‑105 (MQ=255) ccTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCgg > 8:93533/1‑146 (MQ=255) cTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGc < 4:98191/99‑1 (MQ=255) cTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGc > 3:98191/1‑99 (MQ=255) cTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGa > 7:101757/1‑149 (MQ=255) cTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGa > 5:75105/1‑149 (MQ=255) ggACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGAcc > 8:211346/1‑149 (MQ=255) gACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACct < 8:101757/149‑1 (MQ=255) gACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACct > 2:68772/1‑149 (MQ=255) aCGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACctg < 7:272961/149‑1 (MQ=255) | TGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCCGCGAAATTGCCGAGCGGGCC‑‑‑‑GGCTGGCTCTACGACAAGTTCGTGCTGT‑TCATCCAGGACCTGGACGAACTGGGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTG > NC_002947/1886454‑1886749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |