Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 34,262 | T→G | 5.1% | A233A (GCT→GCG) | czrSA → | metal‑sensor histidine kinase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 34,262 | 0 | T | G | 5.1% | 246.7 / 2.4 | 78 | A233A (GCT→GCG) | czrSA | metal‑sensor histidine kinase |
Reads supporting (aligned to +/- strand): ref base T (43/31); new base G (2/2); total (45/33) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 |
CTGTGCGCAGAGGCCTGCTACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGAGTACCGGGAGGTTCTGGAGT > NC_002947/34117‑34410 | cTGTGCGCAGAGGCCTGCTACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGc > 7:245821/1‑149 (MQ=255) cgcAGAGGCCTGCTACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGga < 5:82798/149‑1 (MQ=255) gcAGAGGCCTGCTACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGgat > 5:209144/1‑149 (MQ=255) cAGAGGCCTGCTACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGgat > 2:183316/1‑148 (MQ=255) cAGAGGCCTGCTACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTACCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGgat > 2:135966/1‑148 (MQ=255) gCCTGCTACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATggg < 1:183316/149‑1 (MQ=255) gCCTGCTACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATggg < 8:262346/149‑1 (MQ=255) cTACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATCCAGGCGAGCCAGCatgatgttgat < 5:35774/147‑6 (MQ=255) tACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTcag > 1:29238/1‑149 (MQ=255) cACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTcagcag > 6:108076/1‑149 (MQ=255) cACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATCCAGGCGAGCCAGCatgatgttgat < 7:284703/143‑6 (MQ=255) cACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATCCAGGCGAGCCAGCatgatgttgat > 8:284703/1‑138 (MQ=255) aCCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGctc < 6:209144/147‑1 (MQ=255) aCCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCtctc > 3:98540/1‑149 (MQ=255) aCCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCtctc > 3:80037/1‑149 (MQ=255) ccAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCg < 4:80037/149‑1 (MQ=255) cAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCg > 8:52388/1‑148 (MQ=255) aaGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGCCCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCa > 5:378587/1‑149 (MQ=255) cTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGtttt < 2:29238/148‑1 (MQ=255) tCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCt > 1:125251/1‑149 (MQ=255) aaGATCGCCTCGAAAATCTCCACCGCGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGCACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTgc > 5:72736/1‑148 (MQ=255) gATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTgac > 5:189657/1‑148 (MQ=255) tCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCa < 4:177061/131‑1 (MQ=255) tCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCa > 3:177061/1‑131 (MQ=255) tCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGc > 6:131550/1‑149 (MQ=255) cAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACTGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACCACCTTGCTCACGAACtt > 7:267088/1‑149 (MQ=255) aaCCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGGAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTc > 1:79992/1‑149 (MQ=255) aaCCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCATAAATCAATATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGTACTTc < 7:143836/149‑1 (MQ=255) aaCCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTc < 3:135351/149‑1 (MQ=255) aaCCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTc > 4:135351/1‑149 (MQ=255) ccGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGa < 1:369491/149‑1 (MQ=255) cGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAg < 6:189657/149‑1 (MQ=255) cGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAg > 2:130778/1‑149 (MQ=255) gCCTCGACCATCGCCTTCCAACTGATGGGATGCTGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCAcc < 1:346182/148‑1 (MQ=255) gACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTc < 2:125251/149‑1 (MQ=255) cATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGAAGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCaa > 6:220824/1‑149 (MQ=255) aTCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAAc < 1:307494/149‑1 (MQ=255) tCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAAcc > 1:334563/1‑149 (MQ=255) cGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCt > 6:89248/1‑149 (MQ=255) ccTTCCAACTGATGGGATGCCTGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGTCTCGCCTTGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTTCAACCTGa < 7:153004/149‑1 (MQ=255) ttCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATg > 5:342286/1‑149 (MQ=255) ccAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTAACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTgggcc < 8:245821/148‑5 (MQ=255) cAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATggg > 8:39443/1‑148 (MQ=255) aaCTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGc > 2:31211/1‑148 (MQ=255) aaCTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGc > 1:267528/1‑148 (MQ=255) aaCTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACAAACTTCGAGCACCGCTTTCCAACCTGATGGGc > 4:383536/1‑148 (MQ=255) aCTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCaa < 3:121626/149‑1 (MQ=255) tGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAgg > 5:157104/1‑149 (MQ=255) aTGGGATGCCTGCAGATCTAAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACGTTGCTCTCGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAgg < 2:375838/147‑1 (MQ=255) gggATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGcc > 2:257407/1‑147 (MQ=255) ggATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAg < 4:98540/149‑1 (MQ=255) ggATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACAAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCa < 3:383536/148‑1 (MQ=255) gATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGTCAAGGcaacct > 8:238024/1‑144 (MQ=255) gATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAgg > 1:211757/1‑149 (MQ=255) aTGCCGGCTGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCACTCGCAGATTTCTGACGACCTTGCTCACGAACTTCGAGCTCCGGTTTCGAACATGATGGGCAAGGCCAAGGt > 7:304399/1‑149 (MQ=255) aTGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGt > 4:267090/1‑149 (MQ=255) ggCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGCCCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCt > 5:280093/1‑149 (MQ=255) ggCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCt > 4:194812/1‑149 (MQ=255) gAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGAc < 2:79992/149‑1 (MQ=255) gAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGAc > 6:293056/1‑149 (MQ=255) aaCTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGCCCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGAc > 7:174870/1‑148 (MQ=255) cTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGAc > 7:240020/1‑146 (MQ=255) aaaaTGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCagag > 4:83455/1‑148 (MQ=255) aaaaTGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCaga < 3:194812/147‑1 (MQ=255) atCGCCCACGGCAGCAACATGATGCTTGCTCGGCTGGATGATGGGGTGCAGCAGCTCTCGCAGTTTTGTGACGACCTTGATCTCGAACTTCGAGCACCGCTTTCCACCCTGATGGGCAAGGCGCAGGTTGCCTTGACGAGAgatcgatc < 8:304399/148‑1 (MQ=255) gCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCg < 1:130778/147‑1 (MQ=255) gCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGc < 2:211757/148‑1 (MQ=255) ccGACGGCATCAACATCATGCTGGCTCGCGTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCtt < 5:293056/149‑1 (MQ=255) ccGAAGGCATCTACTTCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTGGCAGTTTTCTGACGACCTTTCTCACTAACTTCGAGCACCGCTTTCGAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCtt < 5:400222/149‑1 (MQ=255) aCGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCACCCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTcc < 6:72736/149‑1 (MQ=255) ggCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGa < 6:378587/149‑1 (MQ=255) ggCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGa < 7:52388/149‑1 (MQ=255) ccccatcatCCAGGCGAGCCAGCATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGAGTAcc > 1:23521/4‑149 (MQ=255) aaCATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGAGTACCg > 3:194600/1‑149 (MQ=255) aCATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGAGTACCgg > 1:20587/1‑149 (MQ=255) atcatGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATTGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGAGTACCgg > 4:274351/1‑147 (MQ=255) tcatGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGAGTACCGGGAg < 5:131550/149‑1 (MQ=255) tGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGAGTACCGGGAGGtt > 2:127823/1‑149 (MQ=255) tCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGAGTACCGGGAGGTTCTGGAGt > 2:41814/1‑149 (MQ=255) | CTGTGCGCAGAGGCCTGCTACCACTGACCAAGTTCCTCAAGATCGCCTCGAAAATCTCAACCGAGAGCCTCGACCATCGCCTTCCAACTGATGGGATGCCGGCAGAACTCAAAATGCTCGCCGACGGCATCAACATCATGCTGGCTCGCCTGGATGATGGGGTTCAGCAGCTCTCGCAGTTTTCTGACGACCTTGCTCACGAACTTCGAGCACCGCTTTCCAACCTGATGGGCAAGGCCCAGGTTGCCTTGACCAGAGAACGATCGCTTTCCGAGTACCGGGAGGTTCTGGAGT > NC_002947/34117‑34410 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |