| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,993,602 | G→T | 7.5% | intergenic (+40/+58) | PP_1780 → / ← PP_1781 | mannosyltransferase/acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,993,602 | 0 | G | T | 7.5% | 247.6 / 6.8 | 80 | intergenic (+40/+58) | PP_1780/PP_1781 | mannosyltransferase/acyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (37/37); new base T (4/2); total (41/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01 | |||||||||||
TGCCTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCGG > NC_002947/1993456‑1993749 | tGCCTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCa < 8:36617/149‑1 (MQ=255) ccTTGGCTACATTGGAGTGAAAGAGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACTGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAg < 4:40867/148‑1 (MQ=255) ttGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCg > 7:30793/1‑149 (MQ=255) cATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCa < 5:48107/149‑1 (MQ=255) cATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCa < 6:350591/149‑1 (MQ=255) aTTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTATGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAg > 8:140901/1‑149 (MQ=255) gAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCTGCGCCGCACTGCAgggtt < 7:282159/149‑3 (MQ=255) gAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCTGCGCCGCACTGCAgggtt < 1:119396/149‑3 (MQ=255) gAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCt < 5:185790/149‑1 (MQ=255) aaaGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGc < 6:217669/149‑1 (MQ=255) aGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCa < 8:30793/149‑1 (MQ=255) aGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCa > 1:200665/1‑149 (MQ=255) gCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCatat > 7:198568/1‑149 (MQ=255) tGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCatat > 8:181473/1‑144 (MQ=255) tGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCatat < 7:181473/144‑1 (MQ=255) aaCTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACtt < 2:130175/147‑1 (MQ=255) aCTAAAACGCCTGGTGTTGGATGGTACGGAAAATACTCAGCGGAAGCAAAAGGCCCCTGCTCAAGCGCACTGTTTGCGTACGCTTGGCCATCCATCGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTg < 1:102114/148‑1 (MQ=255) cTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGc < 6:344318/124‑1 (MQ=255) cTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTAt > 2:137761/1‑149 (MQ=255) aaaCGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGa < 3:381844/148‑1 (MQ=255) aaCGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAgg < 8:198568/149‑1 (MQ=255) aaCGCATGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAgg < 5:44043/149‑1 (MQ=255) tGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGa > 6:149719/1‑141 (MQ=255) tGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGa < 5:149719/141‑1 (MQ=255) ggTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCtttt < 8:373593/122‑1 (MQ=255) ggTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCtttt > 7:373593/1‑122 (MQ=255) ttGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTaaa < 7:345105/149‑1 (MQ=255) gATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAAcgc < 5:225051/149‑1 (MQ=255) ttACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCt > 8:143105/1‑148 (MQ=255) ggAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATcc > 4:17080/1‑149 (MQ=255) tCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACggg > 7:280644/1‑149 (MQ=255) tCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACACTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACggg > 8:19835/1‑149 (MQ=255) aGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACggg < 8:280644/147‑1 (MQ=255) aGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGc < 7:175153/148‑1 (MQ=255) aaGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGcc > 4:31517/1‑149 (MQ=255) aaGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGc < 1:137761/148‑1 (MQ=255) gCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCat > 8:249014/1‑94 (MQ=255) gCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCat < 7:249014/94‑1 (MQ=255) aaGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGc < 8:267283/110‑1 (MQ=255) ggCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACg > 3:328841/1‑149 (MQ=255) gcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GACCCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTg < 5:237079/149‑1 (MQ=255) gcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTg > 3:26645/1‑149 (MQ=255) gcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTg > 5:216643/1‑149 (MQ=255) tGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGc < 8:370649/139‑1 (MQ=255) tGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGc > 7:370649/1‑139 (MQ=255) tCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTACACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGgcg > 8:175440/1‑146 (MQ=255) tCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGgcg > 5:322515/1‑146 (MQ=255) tCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGgcg > 4:176126/1‑146 (MQ=255) acgcgcACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAg < 2:98003/145‑1 (MQ=255) aaGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGGTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGa > 8:346605/1‑148 (MQ=255) aaGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGa > 6:16934/1‑148 (MQ=255) aaGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGAGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGa > 4:17646/1‑148 (MQ=255) gcgcACTGATTGCTTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCAATATGACTTGTATGAGGCACGc < 7:246966/95‑1 (MQ=255) gcgcACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGc > 8:246966/1‑95 (MQ=255) cgcACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGc < 6:216643/149‑1 (MQ=255) cgcACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGc < 7:85830/149‑1 (MQ=255) tGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGtt > 7:93203/1‑147 (MQ=255) cGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCggg > 2:237467/1‑149 (MQ=255) cGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCggg < 7:143105/149‑1 (MQ=255) tACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCg > 7:288591/1‑149 (MQ=255) aCGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCCCAGATAGCGTTGAGCCGGGCGt > 4:200119/1‑149 (MQ=255) gCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTccagc < 5:371576/148‑1 (MQ=255) gCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTccagc > 4:140848/1‑148 (MQ=255) atccat‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCcagccagc > 3:168290/1‑149 (MQ=255) cat‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGtt < 1:312897/125‑1 (MQ=255) cat‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGtt > 2:312897/1‑125 (MQ=255) cat‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGt > 8:321148/1‑149 (MQ=255) cat‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGt < 5:16934/149‑1 (MQ=255) at‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTg > 3:68271/1‑149 (MQ=255) t‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg < 3:31517/149‑1 (MQ=255) t‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg < 7:37969/149‑1 (MQ=255) t‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg < 3:176126/149‑1 (MQ=255) aaaagcccTGCAGTGCGGCTGCGCCGCACTGCAGGGTTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGACACAGCCTGGCGACCCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTg > 8:163017/6‑149 (MQ=38) cccTGCAGTGCGGCTGCGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTc > 1:335777/1‑148 (MQ=255) cccTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTc > 4:348273/1‑148 (MQ=255) cTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCaa > 4:147694/1‑148 (MQ=255) tGCAGTGCGGCTGCGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCaa > 5:148109/1‑147 (MQ=255) aGTGCGGCTGCGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGc > 8:175105/1‑149 (MQ=255) gTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACTGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCt < 7:140901/149‑1 (MQ=255) tGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCt > 5:72875/1‑148 (MQ=255) cggcgCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAg > 7:283428/1‑149 (MQ=255) cgcAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCgg < 4:328841/149‑1 (MQ=255) | TGCCTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCAT‑GAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCGG > NC_002947/1993456‑1993749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |