| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 190,895 | C→T | 6.4% | A159A (GCG→GCA) | PP_0166 ← | HlyD family secretion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 190,895 | 0 | C | T | 6.4% | 233.5 / 3.8 | 79 | A159A (GCG→GCA) | PP_0166 | HlyD family secretion protein |
| Reads supporting (aligned to +/- strand): ref base C (37/36); new base T (3/2); total (40/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.95e-01 | |||||||||||
CTGTTGGCGTACTGGGTGCGTTTGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATG > NC_002947/190749‑191043 | cTGTTGGCGTACTGGGTGCGTTTGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGgcgc < 5:174271/149‑1 (MQ=255) ttGGCGTACTGGGTGCGTTTGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGcgcg < 6:186947/147‑1 (MQ=255) ttGGCGTACTGGGTGCGTTTGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGc < 1:391278/149‑1 (MQ=255) gCGTACTGGGTGCGTTTGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCtt > 3:332279/1‑148 (MQ=255) cGTACTGGGTGCGTTTGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTa < 5:245444/149‑1 (MQ=255) tACTGGGTGCGTTTGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTGGGCGCGGCTTTACg > 4:229496/1‑149 (MQ=255) tGGGTGCGTTTGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAg > 4:296732/1‑149 (MQ=255) ggTGCGTTTGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAg < 7:109357/147‑1 (MQ=255) cctttGGAGCGGTCTGCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTtc < 8:172859/147‑1 (MQ=255) cGTTTGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTtc < 4:332279/149‑1 (MQ=255) tttGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTtcgt < 8:366851/149‑1 (MQ=255) ggAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTtcgtcg < 2:281847/148‑1 (MQ=255) gTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAAt > 7:215705/1‑147 (MQ=255) tATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAg > 7:314574/1‑149 (MQ=255) gcgcAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAgcggg < 5:104800/148‑1 (MQ=255) gcAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGTGCGGCTTTACGCAGCTTTTCGTCGATAATCAgcgggcgg > 5:161906/1‑149 (MQ=255) gcAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGTGCGGCTTTACGCAGCTTTTCGTCGATAATCAgcgggcgg > 5:167895/1‑149 (MQ=255) gcAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAg > 5:43002/1‑124 (MQ=255) gcAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAg < 6:43002/124‑1 (MQ=255) gctgGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTAcc > 5:283495/1‑149 (MQ=255) gACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTc > 7:62903/1‑148 (MQ=255) aCCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCa > 5:226572/1‑148 (MQ=255) ccAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGTGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCaa > 4:67904/1‑148 (MQ=255) ccAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCaaa > 6:65646/1‑149 (MQ=255) aCTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGt > 4:171798/1‑149 (MQ=255) aCTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCATTACGCAGCTTTTCCTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACg > 7:358424/1‑148 (MQ=255) tgctgTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTc > 5:39603/1‑149 (MQ=255) ctgTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTc < 2:27254/147‑1 (MQ=255) aGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTAGCAg > 8:329211/1‑149 (MQ=255) gccAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCGGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCa > 7:7418/1‑149 (MQ=255) aaTTTCGTCCTGCAGTTGCTGGCACCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATgg > 7:334856/1‑149 (MQ=255) cGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAg < 5:65646/148‑1 (MQ=255) cGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAg < 7:229253/148‑1 (MQ=255) gTCCTGCAGTTGCTGGCGGCGGCTCTGGTACAGCGACTCCTCACTGGCGGCCTGG‑TGTGGCGCTGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCGCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGc < 7:253697/149‑1 (MQ=255) gTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAgg < 8:215705/148‑1 (MQ=255) tCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCg > 6:213223/1‑149 (MQ=255) ccTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCgg > 6:179986/1‑149 (MQ=255) tGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAAACAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTc > 3:175020/1‑149 (MQ=255) cAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAg < 2:172333/149‑1 (MQ=255) gCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGTGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTc < 6:161906/148‑1 (MQ=255) gCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGTGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTc < 6:167895/148‑1 (MQ=255) cTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCg < 5:179986/148‑1 (MQ=255) cTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCg < 8:314574/148‑1 (MQ=255) cTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCg < 3:296732/148‑1 (MQ=255) tGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGt > 7:179947/1‑149 (MQ=255) gcgcCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGt < 6:283495/147‑1 (MQ=255) gcCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCa > 3:88201/1‑149 (MQ=255) gcCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCa > 2:73795/1‑149 (MQ=255) ggCTCTGGTACAGCGACTCCTCACTCGCCGCCTGG‑TTTGGCGCGGCATTACGCAGCTTTACGAAGATAAACAGCGCCCGCTCCTCTACCTCGGCACACAAACGTTCGACACGCAGCGCCAAGGCCAGGCCGTCAGCCTCGGATTCAca > 5:610/1‑147 (MQ=255) gCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGc < 1:296711/135‑1 (MQ=255) gCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGc > 2:296711/1‑135 (MQ=255) gCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCaa > 1:234788/1‑149 (MQ=255) tctGGTACAGCGACTCCTCACTGGCCGCCTGGCTTTGGCGCGGCTTTACGCAGCTTTtc < 1:4824/59‑1 (MQ=255) tctGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTtc > 2:4824/1‑58 (MQ=255) gTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCTATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCACAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTg < 4:197085/148‑1 (MQ=255) tACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGa < 8:62903/149‑1 (MQ=255) tACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGa < 2:114070/149‑1 (MQ=255) aCAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCt < 6:235623/81‑1 (MQ=255) aCAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCt > 5:235623/1‑81 (MQ=255) aCAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAg > 8:6890/1‑149 (MQ=255) cAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAgg > 4:385914/1‑149 (MQ=255) tccgtgcTGGCCGCGTTG‑TTTGGGGCGGCTTTACGCATCTTTTCGTCGTTAATCAGGGGGAGGTCCTATACCTCGTCACTGTTAAGTTCGACTCGCAGGGCCATGGCGAGGCTGTCAGCCTCGGTTTCAATATTGTTGGAGGCGAAGc < 8:251267/142‑1 (MQ=255) cACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCgg < 3:125524/72‑1 (MQ=255) cACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCgg > 4:125524/1‑72 (MQ=255) cACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGtt > 7:40645/1‑149 (MQ=255) aCTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTg < 1:287338/133‑1 (MQ=255) aCTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTg > 2:287338/1‑133 (MQ=255) aCTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGtt < 3:171798/148‑1 (MQ=255) aCTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCACCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGt < 7:185404/147‑1 (MQ=255) tGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCa > 5:18566/1‑149 (MQ=255) gccgccTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGc > 7:251267/1‑139 (MQ=255) gccgccTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCAt < 4:88201/148‑1 (MQ=255) ccgccTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAACCGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATc > 6:176089/1‑148 (MQ=255) cgccTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCa < 6:226572/149‑1 (MQ=255) gccTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAg < 5:213223/149‑1 (MQ=255) gccTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAg > 3:30939/1‑149 (MQ=255) g‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCGGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCgca < 8:7418/149‑1 (MQ=255) g‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGgcgc < 7:6890/148‑1 (MQ=255) tttGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCgcag > 7:125069/1‑149 (MQ=255) tttGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCgcag < 8:334856/149‑1 (MQ=255) gatGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCgcag < 6:371969/147‑1 (MQ=255) cgcgGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCCCCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCGGCAAtg > 6:238892/1‑149 (MQ=255) | CTGTTGGCGTACTGGGTGCGTTTGGAGCTGTATTCGCGCAGCTCCTGCTGGCGTTGGACCAACTGCTGTTGCAGGCCGCCAATTTCGTCCTGCAGTTGCTGGCGCCGGCTCTGGTACAGCGACTCCTCACTGGCCGCCTGG‑TTTGGCGCGGCTTTACGCAGCTTTTCGTCGATAATCAGCGGGCGGTCCTCTACCTCGGCACTCAAACGTTCGACTCGCAGGGCCATGGCCAGGCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATG > NC_002947/190749‑191043 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |