| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,158,967 | C→A | 6.4% | intergenic (+136/‑52) | acpP → / → fabF | acyl carrier protein/beta‑ketoacyl‑ACP synthase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,158,967 | 0 | C | A | 6.4% | 226.1 / 3.4 | 75 | intergenic (+136/‑52) | acpP/fabF | acyl carrier protein/beta‑ketoacyl‑ACP synthase II |
| Reads supporting (aligned to +/- strand): ref base C (29/41); new base A (3/2); total (32/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01 | |||||||||||
GGCCTAAGACGCTACAGTCGACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTCTGGCT > NC_002947/2158825‑2159108 | ggCCTAAGACGCTACAGTCGACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACt > 7:250836/1‑149 (MQ=255) catAAGACGCTACAGTCGACCTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGTGCCTGTTGCCATTTCATACCAGCACt < 8:61910/145‑1 (MQ=255) cTAAGACGCTACAGTCGACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTg > 7:367074/1‑148 (MQ=255) acaCGCTACAGTCGACTTTTCTTGCCGGGCAAAACCGCACTCCCTTCGCGGGCGTGGGTTTTTTTCTTTGCGAGCGCCTCGATTTTTTCCGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCACCACTTTAAt < 2:51563/146‑1 (MQ=255) aGACGCTACAGTCGACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAAt < 4:344127/148‑1 (MQ=255) aGACGCTACAGTCGACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATg < 3:64488/149‑1 (MQ=255) gCTACATTCGACGTTTCTTTTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCATCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAAt < 7:153172/149‑1 (MQ=255) gCTACAGTCGACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAAt < 5:333171/149‑1 (MQ=255) gCTACAGTCGACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAAt < 7:321923/149‑1 (MQ=255) cTACAGTCGACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATg < 6:27879/149‑1 (MQ=255) aCAGTCGACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATgg > 7:75839/1‑148 (MQ=255) aCAGTCGACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCAGGCGTGCGGTTTTTTCATTGCGAGAGCCTCGCATTTTTCACGCGGCTTCGTTAACCGCGCACCAAGAGCCTGTTGCAATTTCATTCCAGCACTTGAATGCAATgg > 3:62846/1‑148 (MQ=255) gACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGTCATTGCATTCAAGTGCTGGAATGAAATGGCAacag < 7:166992/148‑1 (MQ=38) aCGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGAc > 1:216586/1‑149 (MQ=255) cGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGAct < 5:119186/149‑1 (MQ=255) cTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGt < 2:91240/148‑1 (MQ=255) ttGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGGGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGtta > 1:59926/1‑149 (MQ=255) gTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCAATCCAGCACTTGAATGCAATGGCAAGAGACTCTGtt < 1:247367/146‑1 (MQ=255) gTCGGGGAAAAACGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGttat < 8:367074/148‑1 (MQ=255) tCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGttatta < 3:387464/149‑1 (MQ=255) tCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGt < 1:356108/144‑1 (MQ=255) tCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGt > 2:356108/1‑144 (MQ=255) ggggAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGa < 5:384575/149‑1 (MQ=255) ggggAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGa < 7:39150/149‑1 (MQ=255) gggAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGa > 8:129480/1‑148 (MQ=255) gggAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGa > 6:151098/1‑148 (MQ=255) ggAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGaaa < 5:151098/149‑1 (MQ=255) ggAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGaa > 4:37639/1‑148 (MQ=255) gAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGaaaa < 3:48407/149‑1 (MQ=255) gAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGaa > 6:227316/1‑147 (MQ=255) aaaaCCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAg > 3:343020/1‑149 (MQ=255) aaCCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCAc > 7:324299/1‑110 (MQ=255) aaCCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCAc < 8:324299/110‑1 (MQ=255) ccGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGgaga < 3:37639/149‑1 (MQ=255) ccGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGgaga < 1:242299/149‑1 (MQ=255) ccGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGgaga < 8:250836/149‑1 (MQ=255) cGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGagag > 4:39317/1‑149 (MQ=255) aCTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTAc > 5:54509/1‑149 (MQ=255) cTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACt < 6:264897/149‑1 (MQ=255) tGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGt < 4:387834/128‑1 (MQ=255) tGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGt > 3:387834/1‑128 (MQ=255) ccTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACtgtg > 7:321781/1‑149 (MQ=255) ccTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACtgt < 5:136914/148‑1 (MQ=255) ttCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGTCTCTTGCCATTGCATTCAAGTGCTGGAATGAAATGGCAACAGGctcttggtg < 8:197850/127‑6 (MQ=18) ttCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGTCTCTTGCCATTGCATTCAAGTGCTGGAATGAAATGGCAACAGGctcttggtg > 7:197850/1‑122 (MQ=18) cTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGt < 2:216586/149‑1 (MQ=255) tGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTcgcg > 6:324960/1‑147 (MQ=255) ttttttCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGcgtcgt > 4:51625/1‑149 (MQ=255) ttttttCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGcgtcgt > 2:26063/1‑149 (MQ=255) ttCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTGTTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGt < 8:104361/148‑1 (MQ=255) cTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCa < 6:388018/148‑1 (MQ=255) ttGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCg > 3:90309/1‑149 (MQ=255) tGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCAc < 7:218860/146‑1 (MQ=255) cGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCggt < 2:246899/148‑1 (MQ=255) cTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTATTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCggtatgggtat < 1:111731/149‑1 (MQ=255) gcggcTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTg < 1:128937/118‑1 (MQ=255) gcggcTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTg > 2:128937/1‑118 (MQ=255) ttCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCCCCGGTATGGGTATGCTGTCGCCACTGGGTAcc > 7:131885/1‑149 (MQ=255) gTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGa < 5:227316/148‑1 (MQ=255) gTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGAt < 8:321781/149‑1 (MQ=255) gTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGAt < 2:59926/149‑1 (MQ=255) gTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGAt < 4:343020/149‑1 (MQ=255) gTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGAt < 6:54509/149‑1 (MQ=255) aCCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTAc > 3:12576/1‑149 (MQ=255) cAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCt > 5:256417/1‑149 (MQ=255) tGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAggg > 3:242208/1‑148 (MQ=255) cttGCCATTGCATTCAAGTGCTGGAATGAAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCa > 7:162306/2‑149 (MQ=38) ttGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCAt > 1:159878/1‑149 (MQ=255) ccATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTct < 7:129480/149‑1 (MQ=255) ccATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTct < 4:12576/149‑1 (MQ=255) ccATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTct > 8:352834/1‑149 (MQ=255) cATTGCATTCAAGTGCTGGAATGAAATGGCAACAGGCTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCCCCGGTATGGGTATGCTGTCGCCACTGGGTACCGATATACCGAGCACCTGGCAGGGCAGTctg > 4:118531/1‑149 (MQ=37) aTTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACAGGTATGGGTATGCTGTCGCGACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTctgg > 5:336126/1‑149 (MQ=255) tttCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTctggc < 3:51625/149‑1 (MQ=255) tCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTctggct < 1:26063/148‑1 (MQ=255) | GGCCTAAGACGCTACAGTCGACGTTTCTTGTCGGGGAAAACCGCACTGCCTTCGCTGGCGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTCTGGCT > NC_002947/2158825‑2159108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |