| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,444,643 | T→C | 6.2% | S83G (AGC→GGC) | sulA ← | cell division inhibitor SulA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,444,643 | 0 | T | C | 6.2% | 238.3 / 4.5 | 81 | S83G (AGC→GGC) | sulA | cell division inhibitor SulA |
| Reads supporting (aligned to +/- strand): ref base T (33/43); new base C (3/2); total (36/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.22e-01 | |||||||||||
GCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGCTCGGGCTGGCTGCTCTTG > NC_002947/2444497‑2444785 | gCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTg > 3:142769/1‑149 (MQ=255) ccagccagCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGc > 7:240188/1‑149 (MQ=255) ccagccagCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGc > 5:66868/1‑149 (MQ=255) ccagccagCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAAGCCTGA‑CCCAGGCCTGGc < 5:215511/149‑1 (MQ=255) cagccagcTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCg < 2:383543/149‑1 (MQ=255) agccagcTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCgg > 1:2786/1‑149 (MQ=255) gccagcTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGt < 1:95947/149‑1 (MQ=255) cagcTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTgg < 7:254043/149‑1 (MQ=255) gcTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTgggg < 2:2786/149‑1 (MQ=255) tCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGGGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGc > 6:382629/1‑148 (MQ=255) tCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGc > 7:263620/1‑148 (MQ=255) cacGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGAt > 5:58146/1‑147 (MQ=255) cacGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGAt > 8:18374/1‑147 (MQ=255) cacGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGAt > 2:367106/1‑147 (MQ=255) cacGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGAt > 7:344937/1‑147 (MQ=255) cGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAgg < 2:129651/149‑1 (MQ=255) gtgGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGGTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTca < 3:244581/149‑1 (MQ=255) gCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTcagc < 3:388490/148‑1 (MQ=255) cTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTcagc > 1:206020/1‑147 (MQ=255) tGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCtt > 6:68893/1‑122 (MQ=255) cccAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGc < 4:73826/149‑1 (MQ=255) ccAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGcc < 6:58146/149‑1 (MQ=255) ccAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGcc > 8:362267/1‑149 (MQ=255) cAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAAGCCTGA‑CCCAGGCCTgg > 1:381089/1‑117 (MQ=255) cAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAAGCCTGA‑CCCAGGCCTgg < 2:381089/117‑1 (MQ=255) aGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGTGTCAGCCAGCGGGCCTc < 6:184850/149‑1 (MQ=255) tGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGTCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTc < 1:96186/149‑1 (MQ=255) tGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTc < 1:101271/149‑1 (MQ=255) gCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTGAATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTc > 1:257468/1‑149 (MQ=255) cAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTcc > 7:358979/1‑148 (MQ=255) cAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCct > 8:145510/1‑149 (MQ=255) aaaGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCctc < 8:344937/149‑1 (MQ=255) aaaGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCctc > 6:111967/1‑149 (MQ=255) aGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCtt < 4:242774/149‑1 (MQ=255) aGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCtt > 4:107026/1‑149 (MQ=255) aGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCtt < 7:318870/149‑1 (MQ=255) aGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGt > 1:249364/1‑149 (MQ=255) aGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGt < 2:206020/149‑1 (MQ=255) gCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTc > 6:229420/1‑149 (MQ=255) ccAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTcg < 7:362267/149‑1 (MQ=255) cAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTcgc > 1:355946/1‑149 (MQ=255) gTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTGCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCgcgc < 3:287998/149‑1 (MQ=255) cAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCgcagca > 6:31943/1‑149 (MQ=255) ggcTTTG‑ATTGCTGCGGGTTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACgggg < 7:56433/148‑1 (MQ=255) cTTTG‑ATTGCTGCGGGGTTGGAGCAGCAGAATAGGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGGGGTGCGTTCAGGGTCAGCCAGCGGGCCTCGTCCTCTTGGGTGAGTTCGCGCAGCACgtgtgc < 4:262933/149‑6 (MQ=255) cTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGc < 6:65596/149‑1 (MQ=255) tttG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGc > 5:145225/1‑148 (MQ=255) aTTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCcagca < 2:257468/149‑1 (MQ=255) ctgcGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGc < 8:263620/148‑1 (MQ=255) tgcGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCtt < 7:145510/149‑1 (MQ=255) gggTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGc < 2:355946/149‑1 (MQ=255) ttGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGt > 3:366724/1‑149 (MQ=255) ttGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGt < 6:211710/149‑1 (MQ=255) agcagcagAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGc > 6:284168/1‑148 (MQ=255) cagcagAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAg > 3:188811/1‑149 (MQ=255) gAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGgcg > 4:95212/1‑149 (MQ=255) aTACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGgcgc < 8:358979/148‑1 (MQ=255) aCGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGcgccgc > 2:85469/1‑149 (MQ=255) cACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGTAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAg < 1:85469/148‑1 (MQ=255) cGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGa < 7:29158/149‑1 (MQ=255) cGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGa < 4:230522/149‑1 (MQ=255) ggTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGAc < 1:266434/149‑1 (MQ=255) gTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACa < 2:249364/149‑1 (MQ=255) gTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACa < 7:18374/149‑1 (MQ=255) gCCCGGCATCGCGCAGCCAGGCCTGGCGTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTc > 1:204819/1‑149 (MQ=255) gCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCg < 4:142769/149‑1 (MQ=255) cccGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGc > 1:184471/1‑149 (MQ=255) ccGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCt < 4:188811/149‑1 (MQ=255) ggCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGa < 3:95212/149‑1 (MQ=255) gCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGaa < 6:307685/149‑1 (MQ=255) gCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGaa < 8:240188/149‑1 (MQ=255) cgcgCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGc > 5:138460/1‑149 (MQ=255) ccaccgCCAAGCCTGA‑CCCAGGCCTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGCt > 1:168779/6‑149 (MQ=255) ccaccgCCAAGCCTGA‑CCCAGGCCTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGCt > 7:22836/6‑149 (MQ=255) gcAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGCTCg > 6:201861/1‑149 (MQ=255) cAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGCTCgg < 5:215919/149‑1 (MQ=255) gCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGCTCGggc > 4:12463/1‑149 (MQ=255) aGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGCTCGggctgg < 5:229420/149‑1 (MQ=255) aGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGCTCGggctgg < 1:367106/149‑1 (MQ=255) gTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGCTCGGGCTGGCTGCTCtt < 6:138460/149‑1 (MQ=255) tCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGCTCGGGCTGGCTGCTCTTg < 5:111967/149‑1 (MQ=255) tCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCCCCGCGCAGCGACAGTTCGCTGAACAGCTCGGGCTGGCTGCTCTTg > 6:284082/1‑149 (MQ=255) | GCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTG‑ATTGCTGCGGGGTTGCAGCAGCAGAATACGTTCACGGTTGAGCCCGGCATCGCGCAGCCAGGCCTGG‑GTCAGGCTTGGCGGTGGGGCGATCAGGGTCAGCCAGCGGGCCTCGTCCTCTTCGCTCAGTTCGCGCAGCACGGGGGCCAGCAGGCTTTGGCAGTGGCCAGGGGCGCCGCGCAGCGACAGTTCGCTGAACAGCTCGGGCTGGCTGCTCTTG > NC_002947/2444497‑2444785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |