Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 2,852,196 | T→C | 5.2% | intergenic (+107/+98) | PP_5531 → / ← PP_2505 | hypothetical protein/GAF domain/GGDEF domain‑containing protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 2,852,196 | 0 | T | C | 5.2% | 226.6 / 2.1 | 76 | intergenic (+107/+98) | PP_5531/PP_2505 | hypothetical protein/GAF domain/GGDEF domain‑containing protein |
Reads supporting (aligned to +/- strand): ref base T (34/38); new base C (2/2); total (36/40) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.88e-01 |
GATTACGTGCAGCACATGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTGGTCACGTCCACCATGTTTGGC > NC_002947/2852051‑2852344 | gATTACGTGCAGCACATGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAg > 5:129944/1‑149 (MQ=255) ttACGTGAATCACATGTTCGCCTATCTGGGAGAGTGAATCCTGGACGATGTGGGCGCTAAGCAAGTGTGCCGAGCTCGAGTCTCGGGGGGGTCGCTGTTTGTTTGTCCAGCGATGTGGACTCCATTCCCGCCTCTGGTTGCAATAAggg < 8:164565/149‑1 (MQ=255) gTGCAGCACATGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTTATTGCAACCAGGggc > 4:72492/1‑147 (MQ=255) gTGCAGCACATGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTTATTGCAACCAGGggc < 3:72492/147‑1 (MQ=255) gTGCAGCACATGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAg > 4:79603/1‑143 (MQ=255) gTGCAGCACATGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAg < 3:79603/143‑1 (MQ=255) tGCAGCACATGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTACCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGggcggc > 1:314204/1‑149 (MQ=255) gcagcaCATGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTCGACGCCATTCCCGCCCCTGGATGCAATAAGGggcggc > 8:304836/1‑148 (MQ=255) cagcaCATGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTTATTGCAACCAGGggcggga < 7:286355/148‑3 (MQ=255) agcaCATGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGAt < 8:151951/149‑1 (MQ=255) cacaTGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGAt > 4:367661/1‑147 (MQ=255) cacaTGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGAt > 2:331561/1‑147 (MQ=255) acaTGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAg > 8:354734/1‑149 (MQ=255) caTGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGt < 8:140146/149‑1 (MQ=255) aTGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAg < 4:338762/134‑1 (MQ=255) aTGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAg > 3:338762/1‑134 (MQ=255) gTTCGCCTACCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTg > 7:8770/1‑148 (MQ=255) ttCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGa < 8:128167/148‑1 (MQ=255) cGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGaaa < 5:295807/148‑1 (MQ=255) gcgtATCTGCGAGAGTGAATCCTGCTCGTGGTTGGCGCTAAGCATCTGTGCCGCGCTCTGCTCTGGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCGATTCCGGCCCGTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGc < 4:135846/146‑1 (MQ=255) gCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGc > 8:77509/1‑149 (MQ=255) cTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGa < 6:291650/149‑1 (MQ=255) tCTGCGACAGTGACTCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAg < 5:329613/147‑1 (MQ=255) cGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGAt < 8:8770/148‑1 (MQ=255) gACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCa < 2:166064/149‑1 (MQ=255) aaTCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCaaa < 1:189855/148‑1 (MQ=255) aaTCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGATTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAAt > 8:369999/1‑149 (MQ=255) aTCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAAt < 8:252778/148‑1 (MQ=255) cACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTaa < 1:331561/148‑1 (MQ=255) cACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTaa < 6:285617/148‑1 (MQ=255) cACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTa < 8:280803/147‑1 (MQ=255) aGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAg < 7:77509/149‑1 (MQ=255) ggCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGaa > 7:340340/1‑149 (MQ=255) cgcTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAAtg > 1:120475/1‑149 (MQ=255) tAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAAt < 5:181742/145‑1 (MQ=255) tAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAAt > 6:181742/1‑145 (MQ=255) aGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGAt < 6:23420/148‑1 (MQ=255) aGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATg < 7:354734/149‑1 (MQ=255) aGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATg > 1:349165/1‑149 (MQ=255) aaCTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCGCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGt < 5:110715/149‑1 (MQ=255) tgCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCt > 8:90889/1‑149 (MQ=255) ccGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTcc > 3:91027/1‑149 (MQ=255) cTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGAt > 1:179537/1‑149 (MQ=255) tCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAACCGCGCTGATCAGGCAAATTGGTAACTCGGCCGATTGTGATGGGTCCCCTCCCGGagc > 8:79913/1‑147 (MQ=255) ccACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCg > 5:79947/1‑148 (MQ=255) cACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGga < 3:388328/149‑1 (MQ=255) gggCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCtt < 5:219799/149‑1 (MQ=255) tCGCAGTTTGTTTGTCCAGCGATGTGGACGCAATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTc < 7:125584/149‑1 (MQ=255) gCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCt > 6:167461/1‑149 (MQ=255) tttgtttgTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAg > 8:328725/1‑148 (MQ=255) tgtttgtCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGa < 7:369999/148‑1 (MQ=255) tttgtCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCg > 8:339478/1‑119 (MQ=255) tttgtCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCg < 7:339478/119‑1 (MQ=255) gtCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAATGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACg < 3:34195/148‑1 (MQ=255) tCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCt > 3:108775/1‑149 (MQ=255) ccAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTg > 4:116860/1‑149 (MQ=255) cAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTgg > 1:330485/1‑149 (MQ=255) cAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTgg > 5:207769/1‑149 (MQ=255) cAGCGATGTGCACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAATGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCggg < 1:230710/149‑1 (MQ=255) cGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCgg > 1:19102/1‑117 (MQ=255) cGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCgg < 2:19102/117‑1 (MQ=255) aTGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACAt < 3:367661/149‑1 (MQ=255) cGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCCTAACTTCCTCAGGATAACGCTGGCACATAGACAAc > 8:325034/1‑149 (MQ=255) cATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTg < 2:314204/149‑1 (MQ=255) cATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTg < 6:79947/149‑1 (MQ=255) ttCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTGGt < 4:91027/149‑1 (MQ=255) gccGCCCCTTATTGCAACCAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTGGTCa > 3:175460/2‑149 (MQ=255) cccGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTGGTc < 7:304836/148‑1 (MQ=255) cccTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTGGTCACGTcc < 2:179537/149‑1 (MQ=255) ttGCAATTAGGGGCGGCGATCAGTTGAAAGCGCGCTGATGAGGCTAATTGGTAAATCCGCCGAATGTGATGCGTACCCTCCCGGATCCGGACATGTTAACTTCCTCAGGAGAACGCTGGCACATAGACAACTTGGTCACGTCCACCATg > 6:81029/1‑149 (MQ=255) cAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTGGTCACGTCCACCATGttt < 2:120475/149‑1 (MQ=255) aaTAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCa < 3:327410/37‑1 (MQ=255) aaTAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCa > 4:327410/1‑37 (MQ=255) aaTAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTGGTCACGTCCACCATGTTTg > 7:217170/1‑149 (MQ=255) aaTAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTGGTCACGTCCACCATGTTTg > 5:53113/1‑149 (MQ=255) aTAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTGGTCACGTCCACCATGTTTgg > 8:203868/1‑149 (MQ=255) tAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTGGTCACGTCCACCATGTTTGGc > 3:289523/1‑149 (MQ=255) | GATTACGTGCAGCACATGTTCGCCTATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCAGCCGAATGTGATGCGTACCCTCCCGGATCCGGAGATCTTAACTTCCTCAGGATAACGCTGGCACATAGACAACTTGGTCACGTCCACCATGTTTGGC > NC_002947/2852051‑2852344 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |