Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,012,712	A→G	6.1%	S55G (AGC→GGC)	PP_2633 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,012,712	0	A	G	6.1%	191.2 / 2.6	65	S55G (AGC→GGC)	PP_2633	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (29/32);  new base G (2/2);  total (31/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01

GGCAGACCCGTCCGACCGTAGCGACGATATTGCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAGGGCGTGGGCGAACGG  >  NC_002947/3012564‑3012860                                                                                                                                                     |                                                                                                                                                     ggCAGACCCGTCCGACAGTAGCGACGATATTGCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTTCCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCca                                                                                                                                                      <  2:313231/149‑1 (MQ=255)        ccGTCCGACCGTAGCGACGATATTGCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGcga                                                                                                                                               >  7:200850/1‑149 (MQ=255)           tCCGACCGTAGCGACGATATTGCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGcgacga                                                                                                                                            >  6:26562/1‑149 (MQ=255)           tCCGACCGTAGCGACGATATTGCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGcgacga                                                                                                                                            >  3:217617/1‑149 (MQ=255)               aCCGTAGCGACGATATTGCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATgcg                                                                                                                                        <  7:9560/149‑1 (MQ=255)                   tAGCGACGATATTGCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGAGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTg                                                                                                                                     >  7:297583/1‑148 (MQ=255)                     gCGACGATATTGCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTAc                                                                                                                                  <  3:238108/149‑1 (MQ=255)                        acgaTATTGCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTAcgcg                                                                                                                               >  1:13828/1‑149 (MQ=255)                            tatTGCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTg                                                                                                                           <  4:217617/149‑1 (MQ=255)                                gCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCAc                                                                                                                       >  6:252278/1‑149 (MQ=255)                                gCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGAGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCa                                                                                                                        <  8:297583/148‑1 (MQ=255)                                 cccAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCAcc                                                                                                                      <  3:287347/149‑1 (MQ=255)                                 cccAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCAcc                                                                                                                      >  1:364801/1‑149 (MQ=255)                                  ccAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGTGCTGTACGCGGCTGTCAccc                                                                                                                     >  2:263065/1‑149 (MQ=255)                                     gTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGgc                                                                                                                  <  3:90345/149‑1 (MQ=255)                                      ttGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGgcg                                                                                                                 >  7:225836/1‑149 (MQ=255)                                         cgcCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCAcc                                                                                                                      <  8:189634/141‑1 (MQ=255)                                         cgcCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCAcc                                                                                                                      >  7:189634/1‑141 (MQ=255)                                          gcCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGgcgc                                                                                                                >  8:285617/1‑146 (MQ=255)                                          gcCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGgcgc                                                                                                                >  4:125178/1‑146 (MQ=255)                                           ccAGCACCTGTACATGCCTGAGCTGTACTCCCAGGAAATCGCGTTGCTGGTGGGCGTTCAGGAGGCCCTGGAGCGCTGTCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGAGCTGTACGCGGCTGTCAGCCGGCGCgtga                                                                                                            <  4:275160/149‑1 (MQ=255)                                             aGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAgg                                                                                                          <  5:46526/149‑1 (MQ=255)                                             aGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAgg                                                                                                          <  3:180423/149‑1 (MQ=255)                                                  cTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTcgc                                                                                                     <  8:200850/149‑1 (MQ=255)                                                      aCATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCa                                                                                                 >  8:96934/1‑149 (MQ=255)                                                            cTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGAc                                                                                             >  3:163697/1‑147 (MQ=255)                                                                    aaCTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGc                                                                                    <  2:13828/148‑1 (MQ=255)                                                                    aaCTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCt                                                                                   >  2:231249/1‑149 (MQ=255)                                                                     aCTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCTCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCtt                                                                                  <  7:131829/149‑1 (MQ=255)                                                                     aCTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCtt                                                                                  <  5:252278/149‑1 (MQ=255)                                                                          cAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCAt                                                                             <  2:329795/149‑1 (MQ=255)                                                                          cAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCAt                                                                             >  5:153128/1‑149 (MQ=255)                                                                           aGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATg                                                                            <  2:312576/149‑1 (MQ=255)                                                                             gACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATggg                                                                          >  6:245443/1‑149 (MQ=255)                                                                                  ctcGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTAcg                                                                     >  8:276371/1‑149 (MQ=255)                                                                                   tcGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGTCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTAcgc                                                                    >  7:147813/1‑149 (MQ=255)                                                                                   tcGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTAcgc                                                                    >  8:135611/1‑149 (MQ=255)                                                                                     gATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTAcgcg                                                                   >  1:341999/1‑148 (MQ=255)                                                                                       tGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAg                                                                <  4:89306/149‑1 (MQ=255)                                                                                            gtggGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCt                                                            <  1:231249/148‑1 (MQ=255)                                                                                              gggCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTggg                                                         >  3:387303/1‑149 (MQ=255)                                                                                                      agcagGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGTGTACGCGGAGGCCTGGGGCGCAgc                                                  <  6:378024/148‑1 (MQ=255)                                                                                                      agcagGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAgc                                                  <  8:225836/148‑1 (MQ=255)                                                                                                       gcagGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAgcgc                                                >  8:36307/1‑149 (MQ=255)                                                                                                         agGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCt                                              >  5:220586/1‑149 (MQ=255)                                                                                                                 cAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTgctggct                                      <  2:58960/149‑1 (MQ=255)                                                                                                                         gCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGTGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTggg                              <  1:263065/149‑1 (MQ=255)                                                                                                                         gCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTggg                              <  5:26562/149‑1 (MQ=255)                                                                                                                         gCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTggg                              <  3:125178/149‑1 (MQ=255)                                                                                                                         gCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTgg                               >  1:50233/1‑148 (MQ=255)                                                                                                                         gCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTg                                <  5:245443/147‑1 (MQ=255)                                                                                                                           cATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGc                             >  6:192362/1‑148 (MQ=255)                                                                                                                            aTTGCTGGGTGAAAGCTGCAGGGCCGGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCttt                                                                                 <  3:69826/95‑1 (MQ=255)                                                                                                                            aTTGCTGGGTGAAAGCTGCAGGGCCGGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCttt                                                                                 <  5:315143/95‑1 (MQ=255)                                                                                                                            aTTGCTGGGTGAAAGCTGCAGGGCCGGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCttt                                                                                 >  4:69826/1‑95 (MQ=255)                                                                                                                            aTTGCTGGGTGAAAGCTGCAGGGCCGGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCttt                                                                                 >  6:315143/1‑95 (MQ=255)                                                                                                                             ttGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTAc                          <  2:364801/149‑1 (MQ=255)                                                                                                                                       aaaGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAgg                >  2:169753/1‑149 (MQ=255)                                                                                                                                       aaaGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGGCCCCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTGTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAgg                >  7:4536/1‑149 (MQ=255)                                                                                                                                             gCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGGGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAGGGCGTgt          <  3:340101/149‑2 (MQ=255)                                                                                                                                              cAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAGGGCGTggg         <  6:153128/149‑1 (MQ=255)                                                                                                                                              cAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAGGGCGTggg         <  7:135611/149‑1 (MQ=255)                                                                                                                                              cAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAGGGCGTgg          <  2:50233/148‑1 (MQ=255)                                                                                                                                              cAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGAGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAGGGCGTggg         >  2:318470/1‑149 (MQ=255)                                                                                                                                                gggCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCCACGCCCTGCAGCGCGtagccc       <  7:36307/149‑6 (MQ=255)                                                                                                                                                   ccAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAGGGCGTGGGCGAAc    <  6:220586/149‑1 (MQ=255)                                                                                                                                                    cagcagCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAGGGCGTGGGCGAACg   >  7:98647/1‑149 (MQ=255)                                                                                                                                                    cagcagCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAGGGCGTGGGCGAACg   >  3:320549/1‑149 (MQ=255)                                                                                                                                                     agcagcGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAGGGCGTGGGCGAACgg  <  7:96934/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GGCAGACCCGTCCGACCGTAGCGACGATATTGCCCAGTTGCGCCAGCACCTGGACATGCCTGAGCTGAACTACCAGGACATCTCGATGCTGGTGGGCGTTCAGCAGGCCCTGCAGCGCTGGCCATTGCTGGGTGAAAGCTGCAGGGCCAGCAGCGACGATGCGCTGTACGCGGCTGTCACCCGGCGCGAGAGGGTCGCGCCATGACCAGCCTGGCTTTGCATGGGGTACGCGGAGGCCTGGGGCGCAGCGCCTTGCTGGCTGCATTGGGCTACGCGCTGCAGGGCGTGGGCGAACGG  >  NC_002947/3012564‑3012860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑