| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,761,723 | G→C | 5.1% | E357D (GAG→GAC) | PP_3325 → | ferric siderophore receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,761,723 | 0 | G | C | 5.1% | 301.6 / 3.4 | 91 | E357D (GAG→GAC) | PP_3325 | ferric siderophore receptor |
| Reads supporting (aligned to +/- strand): ref base G (40/46); new base C (3/2); total (43/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGTATACGGCAAGCCGAAGCCAGCCATCAC > NC_002947/3761577‑3761869 | gCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGc < 8:290994/148‑1 (MQ=255)gCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCt > 3:35097/1‑149 (MQ=255)gCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCt > 1:355829/1‑149 (MQ=255) aCCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGt < 3:18314/149‑1 (MQ=255) cACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGGACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGtgg > 4:248621/1‑149 (MQ=255) cTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCATCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGtggct < 7:323831/149‑1 (MQ=255) cTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGtggct < 5:88704/149‑1 (MQ=255) cacCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCGCG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGtgatgtt < 6:310129/148‑6 (MQ=37) cacCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGtggctg < 5:365401/147‑1 (MQ=255) cacCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACCGGCAGTTCGAGCTGGGtggctgg > 4:218632/1‑148 (MQ=255) ccAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTgg < 1:31256/137‑1 (MQ=38) ccAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTgg > 2:31256/1‑137 (MQ=38) aGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCAt < 6:195135/149‑1 (MQ=255) cACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGa < 6:27181/149‑1 (MQ=255) gCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGAccc > 4:180807/1‑149 (MQ=255) gCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGAccc > 5:323098/1‑149 (MQ=255) gCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGAccc > 6:344928/1‑149 (MQ=255) tCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCtg > 4:245782/1‑149 (MQ=255) tCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCtg > 2:162535/1‑149 (MQ=255) tCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCtg > 8:49825/1‑149 (MQ=255) cAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCAGCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCAAACAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCtgg > 1:268245/1‑149 (MQ=255) aaGGGCAACAGCTCCGAGCCCGAGGCCCTGGTGAGCACCAGCATCACG‑CGCTTCTATCGCGAACGCGAGTTCGAATGGAACGACAAGATCACCCAGGCCGAGCTGCACGGGCAGTTCTAGCTGGGTGGCTGGCAGCATCAGACCCtggt < 1:159497/149‑1 (MQ=255) aaGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCtg < 6:91893/147‑1 (MQ=255) aGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCtggtg < 2:341167/149‑1 (MQ=255) gggCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGgca < 3:10947/132‑1 (MQ=255) gggCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGgca > 4:10947/1‑132 (MQ=255) gggCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCtggtgg < 5:43558/149‑1 (MQ=255) gggCAACAGCGCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCtggtgg < 8:255816/149‑1 (MQ=255) cAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCCACCTGTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTg < 1:132525/149‑1 (MQ=255) cAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTgg < 3:218632/149‑1 (MQ=255) cAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTg > 3:314851/1‑148 (MQ=255) atcTCCCATCCCCACGCCCTGGTTTGCACCACCATCACG‑CGCTTCTATCTCGAACGCGACTTCTAATGTAACTACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCTGAATCAGACCCTGGTGGGGCTGGa < 7:246885/147‑1 (MQ=255) aGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTTGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGa < 1:256372/149‑1 (MQ=255) cTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGt < 2:220437/149‑1 (MQ=255) cTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGt < 1:330007/149‑1 (MQ=255) tCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTa > 5:108005/1‑149 (MQ=255) aGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGaa < 3:180807/149‑1 (MQ=255) aGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGaa < 4:35097/149‑1 (MQ=255) aGCCCCACCCCCTCCTGAGCACCACCATCACC‑CGATTCTATCGCGAAACCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCAGCACGCGCACTTCCACCTGGGTGGCTGGCAGCATCAGACCCTCGTGGGGCTGGAGTACGa > 8:3151/1‑148 (MQ=255) cccAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAAc < 2:77435/149‑1 (MQ=255) ccAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATGACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAAc > 4:90537/1‑148 (MQ=255) ccAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAAc > 5:108139/1‑148 (MQ=255) ccAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACt < 6:323098/149‑1 (MQ=255) aGGCCCTGGTTAGCACCACCATCAGG‑CGCTTCTATCGCGAAGGCGACTTCGAATGGAACGACAAGATCACCGAGGCCGAGCTGCACGGGCATTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAc < 6:393108/149‑1 (MQ=255) aGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAc < 6:108005/149‑1 (MQ=255) cccTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGc < 1:162535/149‑1 (MQ=255) cccTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGc < 7:49825/149‑1 (MQ=255) ccTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGAccc > 6:385209/1‑119 (MQ=255) ccTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGAccc < 5:385209/119‑1 (MQ=255) ggTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAAGTACCGCaa > 2:160373/1‑147 (MQ=255) gTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAAc < 4:314851/147‑1 (MQ=255) gTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACa < 2:352637/148‑1 (MQ=255) gTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACa < 5:37514/148‑1 (MQ=255) tGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAAc > 8:216313/1‑146 (MQ=255) tGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAAc < 7:216313/146‑1 (MQ=255) accaccATCCCG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGaa < 2:92217/149‑1 (MQ=255) accaccATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAg > 5:36892/1‑147 (MQ=255) accaccATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGaa > 5:31290/1‑149 (MQ=255) accaccATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGACAGaa < 3:245782/149‑1 (MQ=255) caccaTCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGaa < 3:264447/147‑1 (MQ=255) caccaTCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGaa > 4:264447/1‑147 (MQ=255) aTCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTAccc > 1:94820/1‑149 (MQ=255) aTCACG‑CGCTTCTAGCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTAccc < 7:51813/149‑1 (MQ=255) g‑cgcTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATc > 7:336680/1‑92 (MQ=255) g‑cgcTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATc < 8:336680/92‑1 (MQ=255) cgcTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTg < 5:267896/108‑1 (MQ=255) cgcTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCAAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTg > 6:267896/1‑108 (MQ=255) cTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGcc < 5:344928/148‑1 (MQ=255) tCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGt > 5:338542/1‑149 (MQ=255) cTTAGAATTGAACGACAACATCACCAAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCATCGTATg < 2:268245/149‑1 (MQ=255) ttCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCCGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATgg > 6:378672/1‑149 (MQ=255) gAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCt < 6:108139/149‑1 (MQ=255) aTGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTg > 3:387033/1‑148 (MQ=255) ggAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCCTATGGGCTGGa > 4:179537/1‑148 (MQ=255) aCGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCTAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGatat < 2:303586/148‑1 (MQ=255) gACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGGTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTa > 4:91419/1‑149 (MQ=255) ccagccACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACaa > 3:82243/6‑149 (MQ=37) aacaTCACCCAGGCCGAGCTGCACGGCCAGTTCGAGATGGGTGGCTGGCAGCATCAGACCATGGTGGCGCTGGAGTACGAAAACTACCGGAACAGCCAGAAGTACCCGCAAAGCGCAACGTCCGCAGAGTATGGGCTGGTATTCTACa > 8:216321/1‑148 (MQ=255) aTCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAACGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAAccc > 4:99497/1‑149 (MQ=255) cccAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGta > 1:350734/1‑149 (MQ=255) cccAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGta > 1:181406/1‑149 (MQ=255) ccAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGta > 3:331090/1‑148 (MQ=255) ggCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGta > 6:340678/1‑145 (MQ=255) ggCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGta < 5:340678/145‑1 (MQ=255) gCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGTATACGGCAAGc > 7:6091/1‑149 (MQ=255) gCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGTATACGGCAAGCCg > 8:50119/1‑148 (MQ=255) tcAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGTATACGGCAAGCCGAagccag < 3:248621/148‑1 (MQ=255) gCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGTATACGGCAAGCCGAagccag < 8:6091/149‑1 (MQ=255) gCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCAGCAGCGTATGGGCTGGATATCTACAACCCGGTATACGGCAAGCCGAagccag > 3:225244/1‑149 (MQ=255) cAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCCGCGTATGGGCTGGATATCTACAACCCGGTATACGGCAAGCCGAagccagc > 2:214327/1‑149 (MQ=255) gAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGTATACGGCAAGCCGAAGCCAGCCATCAc < 4:387033/149‑1 (MQ=255) | GCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACG‑CGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACCGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGTATACGGCAAGCCGAAGCCAGCCATCAC > NC_002947/3761577‑3761869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |