| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,800,844 | C→T | 6.7% | intergenic (+54/+25) | PP_3360 → / ← PP_3361 | membrane protein/aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,800,844 | 0 | C | T | 6.7% | 267.1 / 5.8 | 90 | intergenic (+54/+25) | PP_3360/PP_3361 | membrane protein/aminotransferase |
| Reads supporting (aligned to +/- strand): ref base C (46/37); new base T (4/2); total (50/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.88e-01 | |||||||||||
CCGGTGCGCGCGATCAAGGTCACGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCGGGCCTTCGGTGCCGATC > NC_002947/3800701‑3800992 | ccGGTGCGCGCGATCAAGGTCACGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACg > 4:201138/1‑149 (MQ=255) cGGTGCGCGCGATCAAGGTCACGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGc > 6:335305/1‑149 (MQ=255) gcgcgATCAAGGTCACGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGcc < 1:207158/149‑1 (MQ=255) aTCAAGGTCACGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCgcgc < 5:97770/149‑1 (MQ=255) aaGGTCACGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTg > 1:385986/1‑148 (MQ=255) aaGGTCACGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTg > 1:380091/1‑148 (MQ=255) ggTCACGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATCCGCACGCCCTGCCCGCGCTGaaa > 2:321713/1‑149 (MQ=255) tCACGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACg > 5:271685/1‑149 (MQ=255) aCGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGGCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGc < 3:335138/148‑1 (MQ=255) aCGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGc > 5:5074/1‑148 (MQ=255) aCGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGc > 6:171190/1‑148 (MQ=255) aCGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCt > 5:57068/1‑149 (MQ=255) aTTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCGCATGTGCACGCCCt < 2:322726/127‑1 (MQ=255) aTTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGAGCACCGCAGGGC‑GTGCGCATGTGCACGCCCt > 1:322726/1‑127 (MQ=255) aTTGCCAGAGGCGTCCGCCCTGCATCGCCAGGCTCGCGAAGGCCTGAGCATCACGGGCGCATGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GAGCACAAGCGCACGCCCTGCCCGCCCTGAAACGCTaata > 2:121578/1‑145 (MQ=255) tgcatgagGCGTCCGGCCTGCATGCCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCa < 2:380091/143‑1 (MQ=255) tGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCa < 2:385986/148‑1 (MQ=255) cAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAACGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGCTAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAgcgc > 5:234609/1‑149 (MQ=255) ggCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCcgcg < 3:98636/149‑1 (MQ=255) gTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTg < 5:171190/149‑1 (MQ=255) ccGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTAttt > 5:2993/1‑134 (MQ=255) ccGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTAttt < 6:2993/134‑1 (MQ=255) cGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAg < 6:271685/149‑1 (MQ=255) cGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAg > 1:43929/1‑149 (MQ=255) ccTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTg < 3:98112/149‑1 (MQ=255) cTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGt > 1:343848/1‑149 (MQ=255) tGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTc > 4:201259/1‑149 (MQ=255) cATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCtt < 8:52616/149‑1 (MQ=255) cATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCt < 2:343848/148‑1 (MQ=255) aTGGCCAGGCTCGCGAAGGCCTGAGCATCTGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATATGTTCACCGCAGGGC‑GTGCTCATGGGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCttt < 1:121578/149‑1 (MQ=255) tGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAATCTGTCTTTc < 4:320132/149‑1 (MQ=255) ggCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCAcc < 6:28117/149‑1 (MQ=255) ggCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCAcc > 5:28117/1‑149 (MQ=255) tCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCACGCCAGATAGGTGCACCGCAGCGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCCCCCCGGTGAAGCTGTCTTTCAGCACCTc > 5:202877/1‑148 (MQ=255) gcgAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCt < 7:242835/131‑1 (MQ=255) gcgAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGACCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCt > 8:242835/1‑131 (MQ=255) aGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAgaagg < 6:5074/149‑1 (MQ=255) aGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAgaagg < 6:57068/149‑1 (MQ=255) aGGCCGGAGCATCAGGGGCCCTTGATGCGGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAgaagg < 4:203030/149‑1 (MQ=255) gCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAgaaggaa < 4:82302/149‑1 (MQ=255) gCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAgaagg > 1:393291/1‑147 (MQ=255) cTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGt < 3:372521/149‑1 (MQ=255) tCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCAtt > 8:30341/1‑149 (MQ=255) gcgcTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCg > 8:301744/1‑149 (MQ=255) gcTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGc < 6:234609/149‑1 (MQ=255) aTGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGaa < 4:206749/148‑1 (MQ=255) aTGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGaa > 3:206749/1‑148 (MQ=255) aTGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATCCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGaaa < 1:321713/149‑1 (MQ=255) tGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGCGGTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGaa > 1:80928/1‑148 (MQ=255) tGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGaaaa > 7:288312/1‑149 (MQ=255) tGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGaaaa < 5:335305/149‑1 (MQ=255) tGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGaaaa > 7:37273/1‑149 (MQ=255) gCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGaaaa > 1:98857/1‑148 (MQ=255) cTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCgg > 8:324104/1‑93 (MQ=255) cTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCgg < 7:324104/93‑1 (MQ=255) tGGCGACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAatc > 7:107472/1‑148 (MQ=255) tGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAatca < 2:393291/149‑1 (MQ=255) gCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAatcatc > 2:10568/1‑149 (MQ=255) aCCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGaa < 8:37273/149‑1 (MQ=255) tGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGc > 5:208168/1‑149 (MQ=255) tGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCCCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGc > 1:352088/1‑149 (MQ=255) cGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCCCCTCAAGAAGGCTGTCCGCATTGGCCCGGCTGCAAATCATCGAAGGCCGc > 1:329350/1‑148 (MQ=255) cGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCa > 4:165739/1‑149 (MQ=255) tCGCCAGATAGGTGCACCGCAGGGC‑GTGCGCATGCGCGCGCCCTGCCCGCCCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTCTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCGGCAtttt > 4:270552/1‑149 (MQ=255) gCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCAtttt > 6:261226/1‑147 (MQ=255) gCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCa < 3:201259/149‑1 (MQ=255) cAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAg > 2:66859/1‑148 (MQ=255) aGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCa < 2:98857/149‑1 (MQ=255) gATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCAc > 7:115170/1‑149 (MQ=255) aGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGtt > 7:179827/1‑149 (MQ=255) gTGCAGCGCAGGGC‑GGGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGATGGAAGTCCGCATTGGCGCGGCTGAAAATCATCGACGGCCGGAtttt < 1:280556/138‑1 (MQ=255) gTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCa > 6:195958/1‑80 (MQ=255) gTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCa < 5:195958/80‑1 (MQ=255) gTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTCTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGCAGGCCCCAattt > 2:280556/1‑138 (MQ=255) tGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTc < 3:165739/149‑1 (MQ=255) gCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCa > 7:273089/1‑149 (MQ=255) gCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCACGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGATGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGACCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCa > 6:307722/1‑149 (MQ=255) ccGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGc < 3:201138/149‑1 (MQ=255) cGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAgaaggaa < 2:360098/90‑1 (MQ=255) cGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAgaaggaa > 1:360098/1‑90 (MQ=255) aGGGC‑GTGCGCATGTGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGccc < 2:110119/101‑1 (MQ=255) aGGGC‑GTGCGCATGTGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGccc > 1:110119/1‑101 (MQ=255) aGGGC‑GTGCGCATGTGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGAATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCggg > 4:299321/1‑148 (MQ=255) aGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCAGTTTCAGCACGTTGTCATGCGGGc > 6:225117/1‑149 (MQ=255) gC‑GTGCGCATGTGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCGGGCCtt > 1:381870/1‑149 (MQ=255) gC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCGGGCCtt < 2:80928/149‑1 (MQ=255) c‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCGGGCCTTc > 5:19104/1‑149 (MQ=255) acaTGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCGGGCCTTCGGTGc < 7:301744/149‑1 (MQ=255) aTGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCGGGCCTTCGGTGcc > 2:27729/1‑148 (MQ=255) tGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCGGGCCTTCGGTGCCGa < 6:202877/149‑1 (MQ=255) gcgcACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCGGGCCTTCGGTGCCGAt > 5:200632/1‑149 (MQ=255) gcgcACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCGGGCCTTCGGTGCCGAt > 1:114916/1‑149 (MQ=255) cgcACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCGGGCCTTCGGTGCCGATc < 1:66859/149‑1 (MQ=255) | CCGGTGCGCGCGATCAAGGTCACGGCATTGCCAGAGGCGTCCGGCCTGCATGGCCAGGCTCGCGAAGGCCTGAGCATCAGGGGCGCTTGATGCTGGCAACCTGCCCGGCTCGCCAGATAGGTGCACCGCAGGGC‑GTGCACATGCGCACGCCCTGCCCGCGCTGAAACGCTATTTCAGCGCCGCGGTGAAGCTGTCTTTCAGCACCTCAAGAAGGAAGTCCGCATTGGCCCGGCTGAAAATCATCGAAGGCCGCATTTTCAGCACGTTGTCATGCGGGCCTTCGGTGCCGATC > NC_002947/3800701‑3800992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |