| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,863,777 | G→C | 5.2% | P900P (CCG→CCC) | PP_3413 → | two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,863,777 | 0 | G | C | 5.2% | 316.3 / 5.9 | 96 | P900P (CCG→CCC) | PP_3413 | two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base G (46/45); new base C (3/2); total (49/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.33e-01 | |||||||||||
TACCCGGCCAACCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTG > NC_002947/3863637‑3863924 | tACCCGGCCAACCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGa > 4:41378/1‑149 (MQ=255)tACCCGGCCAACCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGa > 3:359475/1‑149 (MQ=255)tACCCGGCCAACCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCCGTccatga > 7:299725/1‑144 (MQ=255) ccGGCCAACCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGAcag > 6:280923/1‑147 (MQ=255) ccGGCCAACCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACgg > 3:49782/1‑149 (MQ=255) ggCCAACCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACAGGc < 5:280923/149‑1 (MQ=255) ccAACCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCAt < 8:313414/149‑1 (MQ=255) aaCCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGa < 5:36513/149‑1 (MQ=255) aCCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCCGTCCATGACCGGCATgct < 8:299725/149‑3 (MQ=255) aCCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCCGTCCATGACCGGCATgct < 5:68359/149‑3 (MQ=255) cTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCAATTGCAGCATGCCGGTCATGGACGGGCATGAACt > 7:128756/1‑149 (MQ=255) gCTTTTGCTGGAACGGCAACTGCAAACCCTGGAGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGc < 6:317118/140‑1 (MQ=255) gCTTTTGCTGGAACGGCAACTGCAAACCCTGGAGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACAGATTGCAGCATGCCGGTCATGGACGGGc > 5:317118/1‑140 (MQ=255) gCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATgg > 5:306989/1‑128 (MQ=255) gCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATgg < 6:306989/128‑1 (MQ=255) cTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGg‑cg > 5:7657/1‑149 (MQ=255) tGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCACGAAGCGCGCTACGACCTGGTCATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGg‑cg > 7:107708/1‑148 (MQ=255) ggAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGAACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCa > 8:334076/1‑149 (MQ=255) gAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCAt > 4:118859/1‑149 (MQ=255) aaCCGCAACTGCAAACCCTGCGGCACCATGTGACACTGCCGGAGAATGGCGAGATCGCCCTACCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGAAGCATGACGGTCATGGACGGGCATGAACTCACCCGG‑CGCAtt > 4:348517/1‑149 (MQ=255) gCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATg < 6:366881/128‑1 (MQ=255) gCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATg > 5:366881/1‑128 (MQ=255) cAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCAt < 4:184113/143‑1 (MQ=255) cAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCAt > 3:184113/1‑143 (MQ=255) aCTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGcc < 2:306615/149‑1 (MQ=255) cTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCAAGAACTCACCCGG‑CGCATTCGCAGCCt < 4:359475/149‑1 (MQ=255) cAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCTCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTg > 6:307597/1‑147 (MQ=255) cAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTg > 3:370654/1‑147 (MQ=255) cAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGa < 3:67797/149‑1 (MQ=255) ccTGGGGCACCATGTGACACTGGCGGAGACTGGCGAGATCGCCCTTGCACGCTGGCCGGAAGCGCGCTTCGACCTGGTGATAACCGATTGCAGCATGCCGTTCATGGCCGGGCATGAACTCACCCCG‑CGCATTAGCAGCCTGGAGGGc > 6:100703/1‑148 (MQ=255) ccTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCGGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGc > 6:10441/1‑148 (MQ=255) gggCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAgcg > 6:36021/1‑149 (MQ=255) gccccATGGGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGcgcg < 6:372090/146‑1 (MQ=255) gCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGAATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGcgcg > 5:117291/1‑149 (MQ=255) aCCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGc < 6:7657/149‑1 (MQ=255) tgtgACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGc > 4:90367/1‑149 (MQ=255) tgACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCca < 2:164433/149‑1 (MQ=255) acacTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCcagc < 1:363737/149‑1 (MQ=255) acacTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCcag > 6:33077/1‑148 (MQ=255) acacTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCcag < 7:48332/148‑1 (MQ=255) acTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCcagcag > 7:359752/1‑149 (MQ=255) gCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGcgcg < 4:60594/133‑1 (MQ=255) gCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGcgcg > 3:60594/1‑133 (MQ=255) gCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGcc < 7:338534/148‑1 (MQ=255) gCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCg > 8:91000/1‑149 (MQ=255) gCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCg > 6:241403/1‑149 (MQ=255) ggAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTa < 3:90367/149‑1 (MQ=255) agaATGGCGAGATCGCTCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTAtt < 5:307597/149‑1 (MQ=255) agaATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTAtt < 5:241403/149‑1 (MQ=255) agaATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTAt > 8:269488/1‑148 (MQ=255) gaATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTc > 8:6231/1‑149 (MQ=255) gCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAgg < 5:312120/136‑1 (MQ=255) gCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAgg > 6:312120/1‑136 (MQ=255) gagaTCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGt < 4:144474/149‑1 (MQ=255) agaTCGCCCTTGCACGCTGGCAGGAAGCGCGCTTAGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGt > 4:308098/1‑148 (MQ=255) tCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGAcc > 6:187768/1‑149 (MQ=255) cGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGcc > 7:185485/1‑131 (MQ=255) cGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGcc < 8:185485/131‑1 (MQ=255) gCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGc > 2:83135/1‑149 (MQ=255) cccTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGcc < 7:91000/149‑1 (MQ=255) cTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCaa < 5:36021/149‑1 (MQ=255) cTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCaa < 3:41378/149‑1 (MQ=255) atGCACTCTGGCAGGAATCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGTGCATGAACTCACCCGG‑CGCAGGCGCAGCCTGGAGGGCGAGCTCGGCCTGCCAGCAGGCCTTCTTCTTGGCGTGACCGCCAAt < 5:100703/148‑1 (MQ=255) tGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGc < 4:61285/144‑1 (MQ=255) tGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCagat > 3:61285/1‑146 (MQ=255) gCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATg < 5:33077/148‑1 (MQ=255) aCGCTGGCAGGAAGCGCACTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGcc > 1:330731/1‑148 (MQ=255) cGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTCACCGCCAATGCCCa < 7:334076/149‑1 (MQ=255) cTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAgg > 1:341457/1‑149 (MQ=255) gCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGc < 7:6231/147‑1 (MQ=255) gCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGc < 1:83135/147‑1 (MQ=255) cAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCga < 1:15310/149‑1 (MQ=255) aGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCgag > 7:40661/1‑149 (MQ=255) gAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGTCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCATGCCgagga < 3:348517/149‑1 (MQ=255) aGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGc < 7:269488/149‑1 (MQ=255) gcgcgcTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCg < 2:341457/149‑1 (MQ=255) gcacTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTa < 2:330731/146‑1 (MQ=255) aCCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGc < 4:49782/149‑1 (MQ=255) cTGGTGATCACCGATTGCAGCATGCCGGTCATGTTCTGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGTGTGCGAGCGCTGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCt < 8:359752/149‑1 (MQ=255) tGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTg > 6:191326/1‑149 (MQ=255) gTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGc > 3:134683/1‑149 (MQ=255) gATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGc > 5:58699/1‑147 (MQ=255) tCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGc > 4:113470/1‑149 (MQ=255) cACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATg > 8:139627/1‑113 (MQ=255) cACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATg < 7:139627/113‑1 (MQ=255) aCCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTg > 3:359703/1‑137 (MQ=255) aCCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTg < 4:359703/137‑1 (MQ=255) aCCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCgg > 2:26120/1‑149 (MQ=255) aCCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCgg > 4:287702/1‑149 (MQ=255) gttcaTGCCCGTCCATGACCGGCATGAACTCACCCGGACGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGAc > 1:267386/4‑149 (MQ=255) gttcaTGCCCGTCCATGACCGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGAc > 7:440/4‑148 (MQ=255) cagcaTGCCGGTCATGGACGGGCATGACCTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGAc < 5:10441/148‑1 (MQ=255) agcaTGCCGGTCATGGACGGGCATGAACTCACCCGG‑TGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACg > 6:24816/1‑148 (MQ=255) agcaTGCAGGTCATGGAGGGGCTTGAACTCACCCGG‑CGCATTGGCAGGCTGGAGGGCGAGCGCGGCGTGGCAGCAGGCCGTATTCTTGGCGTGACCGCGAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGa < 8:107708/149‑1 (MQ=255) tGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGc < 3:113470/149‑1 (MQ=255) cGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTg < 3:118859/149‑1 (MQ=255) | TACCCGGCCAACCTGCTTTTGCTGGAACGGCAACTGCAAACCCTGGGGCACCATGTGACACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGG‑CGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTG > NC_002947/3863637‑3863924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |