| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,044,479 | G→T | 5.6% | intergenic (+20/+29) | PP_3565 → / ← PP_3566 | LysE family transporter/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,044,479 | 0 | G | T | 5.6% | 231.2 / 2.7 | 71 | intergenic (+20/+29) | PP_3565/PP_3566 | LysE family transporter/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base G (33/34); new base T (2/2); total (35/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.08e-01 | |||||||||||
ATACCTGCTGGCGCGCCTGGCGTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCAC > NC_002947/4044336‑4044618 | aTACCTGCTGGCGCGCCTGGCGTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGcc > 3:238325/1‑149 (MQ=255) ccTGCTGGCGCGCCTGGCGTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCTTCGCCCGt < 2:208058/149‑1 (MQ=255) ccTGCTGGCGCGCCTGGCGTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGt > 7:315745/1‑149 (MQ=255) ctgGCGCGCCTGGCGTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGccc > 6:45091/1‑149 (MQ=255) ggCGCGCCTGGCGTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTg > 2:322892/1‑149 (MQ=255) ggCGTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGt > 4:3550/1‑148 (MQ=255) gCGTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTa‑a < 8:340160/149‑1 (MQ=255) cGTTTCGCATTCGGCCATGGCTGTCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGATACTGTTTGCCTTGATTGTTTTGGCGCTGCTGCTTGGACGTTAGCGGGCCCGCGAACACGGTGGAAGCCCGTGCCCTGCACCGCGTat < 4:387159/148‑2 (MQ=255) gTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACg > 7:179632/1‑149 (MQ=255) gTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACg < 7:178062/149‑1 (MQ=255) gTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACg < 1:84266/149‑1 (MQ=255) gTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACg < 1:265584/149‑1 (MQ=255) gCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTc < 4:238325/148‑1 (MQ=255) gCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTc > 6:153642/1‑148 (MQ=255) aTTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAAc < 2:187031/149‑1 (MQ=255) tCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAAccc > 2:268565/1‑149 (MQ=255) ggCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACcgc < 4:194672/132‑1 (MQ=255) ggCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACcgc > 3:194672/1‑132 (MQ=255) aTGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGCTTTGGCGCGGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGt < 2:131743/149‑1 (MQ=255) gcCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCTCCGCGTA‑ACGGTTCAACCCCGGCGTGCttt < 1:34647/147‑1 (MQ=255) gcCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCttt < 5:153642/147‑1 (MQ=255) gcCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGa < 4:310803/149‑1 (MQ=255) ccAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCttt > 6:169211/1‑146 (MQ=255) ccAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGa < 5:169211/148‑1 (MQ=255) ccAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAg < 3:3550/149‑1 (MQ=255) gggTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTAGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGa < 1:322892/149‑1 (MQ=255) tGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAac < 1:268565/149‑1 (MQ=255) tGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAac < 8:315745/149‑1 (MQ=255) gCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAacac < 5:45091/149‑1 (MQ=255) cAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAg < 7:126310/142‑1 (MQ=255) cAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAg > 8:126310/1‑142 (MQ=255) aaaGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCttt < 4:88307/135‑1 (MQ=255) aaaGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCttt > 3:88307/1‑135 (MQ=255) aaaGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACaa > 8:17946/1‑149 (MQ=255) aaaGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACaa > 7:4284/1‑149 (MQ=255) aaaGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCCGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACaa > 2:146093/1‑149 (MQ=255) aaGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAAc < 4:243698/149‑1 (MQ=255) tttCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAgc > 2:86315/1‑149 (MQ=255) aaTCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCca < 4:183106/149‑1 (MQ=255) aTCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCca > 5:213783/1‑148 (MQ=255) tCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCcaca < 5:229703/149‑1 (MQ=255) gctgcGGGTGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCgg > 5:17702/1‑149 (MQ=255) ccTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGcc > 6:37163/1‑149 (MQ=255) cTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGccc > 1:139862/1‑149 (MQ=255) tGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCccac < 2:139862/148‑1 (MQ=255) gCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCCACCCCGccccccccc > 5:383956/1‑148 (MQ=255) gCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCccccca > 3:373198/1‑149 (MQ=255) gCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCccac > 2:241224/1‑147 (MQ=255) ccTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCccacca > 4:145348/1‑148 (MQ=255) gATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAACCACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGc > 3:215502/1‑148 (MQ=255) gTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACACGCCAACCCCCCCCCCACCAGGTCCACGc > 4:254061/1‑148 (MQ=255) tttGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTATAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCt > 3:239863/1‑149 (MQ=255) tttGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCCCCAGTGCCACGCCt > 4:291966/1‑149 (MQ=255) tGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTg < 3:67113/149‑1 (MQ=255) ggCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGGCCCCCCCCGGGCCCCGccgttc > 8:247251/1‑145 (MQ=255) ggCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTg < 3:291966/148‑1 (MQ=255) gcgcTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTgcc < 3:145348/149‑1 (MQ=255) gcgcTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTgc < 1:241224/148‑1 (MQ=255) gcTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTgccag > 7:161087/1‑149 (MQ=255) aTAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAACCACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAAc < 4:215502/149‑1 (MQ=255) gCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAgc < 8:161087/149‑1 (MQ=255) ggCCCGCGAACACGGGCGAAGCGCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCa < 8:179632/149‑1 (MQ=255) cccGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCCCACCCGGCAACCCCGCCCCCACCCGTGGCACGCCTTGCCCGCCCAACGGGCTGAACAGCGCCCt > 7:219956/1‑149 (MQ=255) ccGCGAACACGGGCGAAGCCCGTGTCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACACCGCAAACCCGCCCCCACCACTGCCACCCCTTGCCCTCCAAACAGGCTGCACAGCGCACTg > 4:219700/1‑149 (MQ=255) ccGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTg < 6:383293/149‑1 (MQ=255) ccGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTg < 5:37163/149‑1 (MQ=255) ccGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTg < 8:4284/149‑1 (MQ=255) gcgAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGAGCTTTGAGTAGAAACACAACCAGCTCCACACCCGGCAACCCCCCCCCCCCCAGTGCCACGCCTTTCCAGCCCAACTGGCGGAACAGCGCCCTGGc > 7:251064/1‑149 (MQ=255) ggcacGGGCTTCGCCCGTGCCCTGCACCGCGTATACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTg > 1:252456/3‑145 (MQ=255) ggcacGGGCTTCGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCCCGCCTTGCCCGCCAAACGGGCTGAACAGCGCACGTGCCAc > 8:144681/3‑149 (MQ=255) ggcacGGGCTTCGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTg < 2:252456/142‑1 (MQ=255) | ATACCTGCTGGCGCGCCTGGCGTTTCGCATTCGGCCATGGCTGGCCAAGGGTGGCAAAGGTTTCAATCGCTGCTGCGGGAGCCTGTTTGCCTTGATTGGTTTGGCGCTGCCGCTTGGCCGATAGCGGGCCCGCGAACACGGGCGAAGCCCGTGCCCTGCACCGCGTA‑ACGGTTCAACCCCGGCGTGCTTTGAGTAGAAACACAACCAGCGCCACACCCGGCAACCCCGCCCCCACCAGTGCCACGCCTTGCCAGCCAAACTGGCTGAACAGCGCACTGGCCAC > NC_002947/4044336‑4044618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |