| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,408,307 | A→G | 5.4% | intergenic (‑24/+125) | PP_3890 ← / ← ybcO | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,408,307 | 0 | A | G | 5.4% | 217.9 / 2.1 | 75 | intergenic (‑24/+125) | PP_3890/ybcO | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (32/38); new base G (2/2); total (34/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.06e-01 | |||||||||||
GCGCAGCTGCAGCTCCTGCATCAGCGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATGCCTACTCATGCAACCAGCACCCCCTCGC > NC_002947/4408161‑4408454 | gcgcAGCTGCAGCTCCTGCATCAGCGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCAt < 4:325681/148‑1 (MQ=255) gcagctgcagctCCTGCATCAGCGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAg < 3:306320/149‑1 (MQ=255) tgcagctCCTGCATCAGCGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAAtt < 5:273603/149‑1 (MQ=255) cagctCCTGCATCAGCGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGc > 8:357494/1‑149 (MQ=255) ctCCTGCATCAGCGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCca > 6:180974/1‑148 (MQ=255) cATCAGCGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATc < 5:62716/147‑1 (MQ=255) aTCAGCGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTc < 8:139533/149‑1 (MQ=255) tCAGCGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTcc < 5:6524/149‑1 (MQ=255) aGCGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCAGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCa < 4:276330/148‑1 (MQ=255) gcgcAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAg > 2:149768/1‑148 (MQ=255) cgcAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGaa < 4:113468/149‑1 (MQ=255) ccTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAaggagg > 6:232509/1‑149 (MQ=255) ccTGCTCCTGCCCTTCCCGCGCGACGGGCTTGGCGCTGCGCGGCTGGGCCCGGAATGGGCGAAGGGCGGGAGCGTTCATAGCGCGCTCCCCCACAGATATCCGACGAGGCCCATATCCTCAGCAATTTCCACAATCGTCCAGAcggagg < 2:290310/149‑1 (MQ=255) ccTGCTCCTGCCCTGCCCGGGCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAAGGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCCCAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAaggagg < 2:285166/149‑1 (MQ=255) tGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCg > 4:24708/1‑149 (MQ=255) ccTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTg < 6:224267/149‑1 (MQ=255) cTGCCCTTCCCGGTCGACTGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTg < 6:218908/148‑1 (MQ=255) cTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGc > 7:62571/1‑149 (MQ=255) cTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGc < 1:7343/149‑1 (MQ=255) tGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGTCggccct > 6:52169/1‑144 (MQ=255) tGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGcg > 1:119057/1‑149 (MQ=255) cccTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCGTCAGCAATTGCCACAATc < 6:353052/126‑1 (MQ=255) cccTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCGTCAGCAATTGCCACAATc < 4:127378/126‑1 (MQ=255) cccTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCGTCAGCAATTGCCACAATc > 3:127378/1‑126 (MQ=255) cccTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCGTCAGCAATTGCCACAATc > 5:353052/1‑126 (MQ=255) ccGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAg < 5:205389/148‑1 (MQ=255) tCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCg > 4:107993/1‑149 (MQ=255) gACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGAc > 1:216301/1‑149 (MQ=255) cGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGGGAAGGGCGGGAGCGTTCATAGCTCCCTCCCCCACCGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTc < 6:332315/149‑1 (MQ=255) ggCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCt < 1:358587/149‑1 (MQ=255) ggcgcggcgcGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCtt < 1:26189/148‑1 (MQ=255) ggcgcggcgcGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGACGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCtt < 2:231476/148‑1 (MQ=255) gcgcggcgcgGCTTGGCCCTGAATGGGCGAAGGGGGGGAGTTTTCATAGCTCGCTCCCCCACAGATATCCTACGAGTCGCTTAGCATCAGCATTTGCCACAATCTTCTATTAGGTGTGGTTTGGGTCGTGAGGGGCGACTCGTGGTTg < 4:153377/148‑1 (MQ=255) gcgcggcgcgGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTGGCGTCGTGAGGGCCGACTCCTGCTTg < 5:232509/148‑1 (MQ=255) cgcggcgcggCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTgg > 1:270042/1‑148 (MQ=255) gcggcgcggcTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGc > 5:340853/1‑148 (MQ=255) gcTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCcg < 8:62571/149‑1 (MQ=255) gCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGaa > 4:175219/1‑148 (MQ=255) ccTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAg > 6:108976/1‑149 (MQ=255) ccTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAg > 2:223398/1‑149 (MQ=255) cTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAgc > 3:93056/1‑149 (MQ=255) cTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAgc < 2:270042/149‑1 (MQ=255) aTGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGcga < 3:107993/149‑1 (MQ=255) gggCGAATGGCGTGACCGTTCATACAACGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTc < 2:253217/117‑1 (MQ=255) gggCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCGCACAGATAGCCGACGAGGCCGATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGAGGTTGCGTCGTGAGGGCCGACTc > 1:253217/1‑117 (MQ=255) ggCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGcgacga > 3:222864/1‑149 (MQ=255) gCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGACCATAGCATCAGCCATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGcgacgac > 5:271267/1‑149 (MQ=255) cGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGGCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGcgacgacg > 8:254544/1‑149 (MQ=255) gAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGcgacgacga < 2:216301/149‑1 (MQ=255) gAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGcgacgac > 5:173669/1‑147 (MQ=255) aGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAg‑c < 4:222864/149‑1 (MQ=255) gCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAg‑cacg < 6:173669/149‑1 (MQ=255) ttCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAg < 7:135889/112‑1 (MQ=255) ttCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAg > 8:135889/1‑112 (MQ=255) cATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCAt > 7:99655/1‑149 (MQ=255) aTAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATg < 5:89434/149‑1 (MQ=255) ctcgctcCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGaaa > 3:343165/1‑148 (MQ=255) gctcCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGaaaaa < 5:180974/147‑1 (MQ=255) gctcCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGa < 4:173773/149‑1 (MQ=255) ccccACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGatat < 6:340853/148‑1 (MQ=255) ccccACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATg < 3:24708/149‑1 (MQ=255) ccccACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATg > 4:388385/1‑149 (MQ=255) cccACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATGc < 7:357494/149‑1 (MQ=255) ccACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAGCCACGCACATCAGCATGAAAAAGATATGc < 1:223398/149‑1 (MQ=255) gATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATG‑AAAAGATATGCCTACTCa > 3:181613/1‑149 (MQ=255) gCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATGCCTACTCATGc < 4:159069/149‑1 (MQ=255) ccGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATGCCTACTCATGc > 4:229998/1‑148 (MQ=255) cgacgaGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATGCCTACTCATGCaa > 1:335102/1‑149 (MQ=255) cgacgaGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGCTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGATAAAGATAAGCCTACTCATGCaa > 3:10275/1‑149 (MQ=255) cgaGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATGCCTACTCATGCAACCa < 4:236659/149‑1 (MQ=255) gaGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATGCCTACTCATGCAACCAg > 4:320457/1‑149 (MQ=255) ggCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAGCCACGCACATCAGCATGAAAAAGATATGCCTACTCATGCAACCAGc < 1:81347/149‑1 (MQ=255) ccATCGCATCCGCAATTGCCACCATCGTCCAGAAGGACGCGGGTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGCCGACGAG‑CACGCACATCAGCATGAAAACGATATGCCTACTCATGc < 2:213040/138‑1 (MQ=255) ccATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGAGATGCCTACTCAGGc > 1:213040/1‑138 (MQ=255) ccATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCATGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATGCCTACTCATGCAACCAGCAccc > 1:96825/1‑149 (MQ=255) aTCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGATGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATGCCTACTCATGCAACCAGCACCCCCTcgc < 4:93056/148‑1 (MQ=255) aTCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATGCCTACTCATGCAACCAGCACCCCCTcgc > 5:6943/1‑148 (MQ=255) | GCGCAGCTGCAGCTCCTGCATCAGCGCAGCCTGCTCCTGCCCTTCCCGGTCGACGGGCTTGGCGCGGCGCGGCTTGGCCCTGAATGGGCGAAGGGCGGGAGCGTTCATAGCTCGCTCCCCCACAGATAGCCGACGAGGCCCATAGCATCAGCAATTGCCACAATCGTCCAGAAGGAGGCGGTTGCGTCGTGAGGGCCGACTCCTGCTTGGCAAAGGGCCGCGAACAGCGCGACGACGAG‑CACGCACATCAGCATGAAAAAGATATGCCTACTCATGCAACCAGCACCCCCTCGC > NC_002947/4408161‑4408454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |