| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,449,277 | G→T | 8.2% | R90L (CGC→CTC) | nicR → | HTH‑type transcriptional repressor NicR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,449,277 | 0 | G | T | 8.2% | 201.3 / 5.5 | 71 | R90L (CGC→CTC) | nicR | HTH‑type transcriptional repressor NicR |
| Reads supporting (aligned to +/- strand): ref base G (33/30); new base T (4/2); total (39/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
GCCTGCGACCCGCAGCTTACCTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCATGGGCAGCCTGAATGCCGG > NC_002947/4449132‑4449421 | gCCTGCGACCCGCAGCTTACCTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGgcgcgc > 2:279711/1‑147 (MQ=255) gCGACCCGCAGCTTACCTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTg > 8:364781/1‑149 (MQ=255) cccGCAGCTTACCTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGGGGTGTACCAGGCTACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGc < 1:285507/149‑1 (MQ=255) ccGCAGCTTACCTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTg > 6:390354/1‑147 (MQ=255) cGCAGCTTACCTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAg < 5:105049/149‑1 (MQ=255) cGCAGCTTACCTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAg > 6:343913/1‑149 (MQ=255) aCCTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGc < 6:154479/148‑1 (MQ=255) ccTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGcc < 5:120534/148‑1 (MQ=255) ccTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGAGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTTAAGGCGCCCGAGCTGGTGCAGCTTTCGCCa > 2:147601/1‑149 (MQ=255) cTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTgg < 2:245695/134‑1 (MQ=255) cTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTgg > 1:245695/1‑134 (MQ=255) cTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGc > 4:221587/1‑146 (MQ=255) cTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTCAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCAGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGc > 7:158944/1‑146 (MQ=255) cGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGAc < 1:279711/148‑1 (MQ=255) cccTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGCGCGCCTGAAGGCGCGCGAGCAGGTGCCGCTTTCGCCAGACCCGGGCGCCCGgc > 8:360244/1‑147 (MQ=255) cccTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGgc < 7:360244/147‑1 (MQ=255) ccTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCCGCTTTCGCCAGACCCGGGCGACCGgcgc > 8:37939/1‑148 (MQ=255) cTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGgcgc > 3:110174/1‑147 (MQ=255) tgCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGCGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGt > 3:46945/1‑149 (MQ=255) tcgcCATGCGCGTTGACTGCCCCAGCTCCCAGGCTTAACTGATCATGGCCACCGCGGTGGACGAGGCAAACTTCCGCG‑TCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGGAGCTTTCGCTAGACCCGGGCGACCGGCGCAAGGt < 8:158944/147‑1 (MQ=255) gcgcCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTc < 7:364781/149‑1 (MQ=255) gcgcCCTGCGCGAGCACGGCCCCAGCTCCCCGGCTGACCTGCTCCAGGCCACCGCGGTGGACCAGGCCACCATCCGCG‑GCAGCGTCGCGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGCCCCGGGCGACCGGCGCAAGGTc < 8:132182/149‑1 (MQ=255) cccTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTTGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTTGTGCAGCTTTCGCCTGACCCGGGCGACCGGCGCAATGTCAtc < 6:380196/149‑1 (MQ=255) cTGCGCGATCACGGCCCCAGCTCCCATGCTGAACTGATCAAGGCGACCGCGGTGGAACAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCACCAGACCCGGGCGACCGGCGCAAGGTCAtcgt < 3:57004/149‑1 (MQ=255) cgcgATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCAtcgtc < 6:78539/147‑1 (MQ=255) tCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCgg < 3:199262/119‑1 (MQ=255) tCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCgg > 4:199262/1‑119 (MQ=255) aCGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTc > 3:323170/1‑146 (MQ=255) aCGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTc < 4:323170/146‑1 (MQ=255) cGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCg < 6:8137/149‑1 (MQ=255) ggCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCg > 4:274934/1‑148 (MQ=255) ccAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCGTACATCGTCGCGCGCCTGAAGGCGCGCCAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCAACGTCGAACTCACCGaaac > 1:304389/1‑148 (MQ=255) ccAGGCTGAACTGATCAAGGCCACCTCGGTGGACCAGTCAACCATCCGCG‑GCATGGTCGAGCGCCTGAAGGCGCGCTAGCTGGTGCAGCTTTCGCCAGACCCTGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAgcggcgc < 1:147601/147‑1 (MQ=255) ccAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCTCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGCACTCACCGAAAgcggcgcgg > 8:153979/1‑149 (MQ=255) ccAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAgcggcgcgg > 7:41802/1‑149 (MQ=255) gAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTg > 4:206201/1‑147 (MQ=255) gAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTg < 3:206201/147‑1 (MQ=255) aaCTGATCAAGGCCACCGGGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGc < 2:304389/147‑1 (MQ=255) aaCTGATCAAGGCCACCGCGGTGGACAAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTc > 5:382090/1‑149 (MQ=255) aCTGATCAAGGCCACCGCGGTGGACCAGCCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTc > 1:220273/1‑148 (MQ=255) aTCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATg < 5:390354/148‑1 (MQ=255) cAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCaa > 2:8913/1‑149 (MQ=255) aaGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAAt > 7:356104/1‑149 (MQ=255) aaGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATAGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAAt > 2:188330/1‑149 (MQ=255) aGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAAt > 5:286761/1‑148 (MQ=255) ggCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGcc > 7:320017/1‑133 (MQ=255) ggCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGcc < 8:320017/133‑1 (MQ=255) gCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGAt > 2:254082/1‑149 (MQ=255) cACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATcc > 3:300849/1‑149 (MQ=255) cACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATcc < 4:110174/149‑1 (MQ=255) aCCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCaa > 7:135098/1‑142 (MQ=255) cgcgGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCt > 7:347872/1‑149 (MQ=255) aCCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCGGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCgg < 4:46945/149‑1 (MQ=255) gCAACCATCCGCG‑CCATCGTCGAGCGCCTGAAGGCGCCCGAGCTGGTGCCGCTTTCGCCAGAACCGGGCGACCGGCTCAAGGTCATCCTCCAACTCACCGAAACCGGCGCGTCCTTGCTCGATGAAATGATCCCCTGCGCCCGGCAgct > 2:359506/1‑147 (MQ=255) cATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCg < 3:221587/149‑1 (MQ=255) cATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTAGCCAGACCCGGGCGACCGGCGCAAGGTAATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCac > 6:216533/1‑146 (MQ=255) cgcg‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACt < 8:356104/149‑1 (MQ=255) cg‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGa < 3:274934/149‑1 (MQ=255) g‑gCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAg < 5:343913/149‑1 (MQ=255) cATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCa < 8:41802/149‑1 (MQ=255) cATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCa > 1:148518/1‑149 (MQ=255) cagctcgCGCGCCTTCAGGCGCTCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCGGCGa < 6:240763/136‑1 (MQ=255) cagctcgCGCGCCTTCAGGCGCTCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCGGCGa > 5:240763/5‑140 (MQ=255) agctcgCGCGCCTTCAGGCGCTCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCATg > 8:185383/4‑149 (MQ=255) gtcgAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCATggg > 5:309072/1‑149 (MQ=255) tcgCGCGCCTTCAGGCGCTCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCGTggg > 3:222356/1‑148 (MQ=255) gAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCATGGGCAg > 5:316842/1‑149 (MQ=255) cTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCTAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGCGCATGGGCAGCCTGaa > 3:317830/1‑149 (MQ=255) cTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCt > 4:82282/1‑109 (MQ=255) cTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCATGGGCAGCCTGaa < 5:58856/149‑1 (MQ=255) ggCGCTCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCATGGGCAGCCTGAATGCCg < 7:185383/149‑1 (MQ=255) ggCGCGCGAGCTGGTGCAGCGTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCATGGGCAGCCTGAATGCCg < 1:359506/149‑1 (MQ=255) gcgcgcGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCATGGGCAGCCTGAATGCCgg < 7:153979/149‑1 (MQ=255) | GCCTGCGACCCGCAGCTTACCTCGATCCAGTTCGTCACCCTGTGCGCCCTGCGCGATCACGGCCCCAGCTCCCAGGCTGAACTGATCAAGGCCACCGCGGTGGACCAGGCAACCATCCGCG‑GCATCGTCGAGCGCCTGAAGGCGCGCGAGCTGGTGCAGCTTTCGCCAGACCCGGGCGACCGGCGCAAGGTCATCGTCGAACTCACCGAAAGCGGCGCGGCCTTGCTCGATGCAATGATCCCCTGCGCCCGGCAGATCAGCGAACTGAGCATGGGCAGCCTGAATGCCGG > NC_002947/4449132‑4449421 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |