| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 307,196 | A→C | 7.0% | intergenic (+211/‑1658) | hslO → / → PP_0254 | molecular chaperone HslO/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 307,196 | 0 | A | C | 7.0% | 204.8 / 3.4 | 68 | intergenic (+211/‑1658) | hslO/PP_0254 | molecular chaperone HslO/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (27/36); new base C (2/2); total (29/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
TACTTTTTTTGGGCGTTTCTGGCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCATCGTCGAAGAACCTTCCACCCAGGAC > NC_002947/307051‑307344 | tACTTTTTTTGGGCGTTTCTGGCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCt > 2:112437/1‑149 (MQ=255) cTTTTTTTGGGCGTTTCTGGCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGa < 1:138982/149‑1 (MQ=255) cTTTTTTTGGGCGTTTCTGGCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGa < 1:200484/149‑1 (MQ=255) tttttttGGGCGTTTCTGGCATAATCCGGCCACTTTTTTTGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAg > 1:259969/1‑149 (MQ=255) tttttttGGGCGTTTCTGGCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAg > 4:182295/1‑149 (MQ=255) ttGGGCGTTTCTGGCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTc < 6:104239/148‑1 (MQ=255) gggCGTTTCTGGCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGa < 5:202587/148‑1 (MQ=255) ggCGTTTCTGGCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGAt < 3:233431/148‑1 (MQ=255) ttCTGGCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTg > 4:201908/1‑149 (MQ=255) tCTGGCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTg < 7:212492/148‑1 (MQ=255) gCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGCCCTGAGCGTCGATGAGCTGGTaa > 3:165374/1‑148 (MQ=255) gCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGCCCTGAGCGTCGATGAGCTGGTaa > 3:159358/1‑148 (MQ=255) cATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTaaaa < 6:5153/149‑1 (MQ=255) tAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGa < 7:266773/122‑1 (MQ=255) tAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGa > 8:266773/1‑122 (MQ=255) aTCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAaagaa < 2:253158/148‑1 (MQ=255) ggCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCt < 5:286574/149‑1 (MQ=255) gCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGACCCGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAgcgc < 1:112437/149‑1 (MQ=255) ccACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGc < 3:201908/149‑1 (MQ=255) cACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGc > 5:336810/1‑148 (MQ=255) aCTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCt < 3:10465/145‑1 (MQ=255) aCTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCt > 4:10465/1‑145 (MQ=255) tCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGt < 4:36134/148‑1 (MQ=255) cTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAg < 1:344462/149‑1 (MQ=255) tagtagTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGc < 6:221972/148‑1 (MQ=255) agtagtTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTaaaa < 4:390505/123‑1 (MQ=255) agtagtTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTaaaa > 3:390505/1‑123 (MQ=255) gtagtTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTg < 4:363144/131‑1 (MQ=255) gtagtTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTg > 3:363144/1‑131 (MQ=255) ttttttCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAg > 1:20059/1‑149 (MQ=255) ttttttCAAGACAACTACAAAACGTATGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCCAGCCACCAACACCGTGTACACCGACCTGCGCGTCGATGAGCTGGGAAAGGCAGCGCTGCAGCGCGGAGCCGGCGTACTAg > 8:364974/1‑149 (MQ=255) ttttCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGc < 8:307826/148‑1 (MQ=255) tCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGa < 3:185622/148‑1 (MQ=255) aaGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATa < 3:108185/148‑1 (MQ=255) aaGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATAc > 6:83498/1‑149 (MQ=255) aaGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATAc > 6:30650/1‑149 (MQ=255) gACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTTTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTg < 7:218250/149‑1 (MQ=255) cAACTACAAAACGTTGGGAGCACTCGGCGTCGGGCCGGATTGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGgc < 4:9573/149‑1 (MQ=255) tACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAAGACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATAc < 1:125361/141‑1 (MQ=255) tACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATAc > 2:125361/1‑141 (MQ=255) tACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCAc > 5:179690/1‑149 (MQ=255) aaaCGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGt > 7:201201/1‑149 (MQ=255) aaaCGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGt < 6:336810/149‑1 (MQ=255) aaaCGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGt > 1:380282/1‑149 (MQ=255) cGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGt < 1:183914/149‑1 (MQ=255) tttGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTgg < 3:182295/149‑1 (MQ=255) ggAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGgaga > 4:346200/1‑149 (MQ=255) gAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAAcgcg < 4:158531/106‑1 (MQ=255) gAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAAcgcg > 3:158531/1‑106 (MQ=255) gCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGGCCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTg < 6:344172/149‑1 (MQ=255) gCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGCCCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTg < 4:159358/149‑1 (MQ=255) gCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGCCCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTg < 4:165374/149‑1 (MQ=255) aCTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGt < 2:259969/149‑1 (MQ=255) tCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCa > 5:214363/1‑149 (MQ=255) ggCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCgg < 2:20059/149‑1 (MQ=255) ggCCGGATGGGGGATCTCATGA‑‑CGCAAGCCAACCACACCGTGTACACCGACCGGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCgg < 7:364974/149‑1 (MQ=255) gCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGc < 2:380282/149‑1 (MQ=255) tctcATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCt < 3:353770/148‑1 (MQ=255) ctcATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGa > 1:350431/1‑149 (MQ=255) gCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCa > 3:330836/1‑149 (MQ=255) gCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCAtcgt > 3:367558/1‑149 (MQ=255) aacaacACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCAtcgtcg > 6:148275/1‑148 (MQ=255) cGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCATCGTCGAAGAACCtt > 8:194119/1‑149 (MQ=255) gtgtACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCATCGTCGAAGAACCTTc < 6:179690/149‑1 (MQ=255) acacCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCgg < 1:175696/117‑1 (MQ=255) acacCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCgg > 2:175696/1‑117 (MQ=255) cacCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCATCGTCGAAGAACCTTCCAcc < 3:346200/148‑1 (MQ=255) acCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCATCGTCGAAGAACCTTCCAcc > 1:302854/1‑147 (MQ=255) acCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCATCGTCGAAGAACCTTCCAcc > 5:188278/1‑147 (MQ=255) acCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCATCGTCGAAGAACCTTCCACCCa < 4:367558/149‑1 (MQ=255) aCCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCATCGTCGAAGAACCTTCCACCCAGGAc > 1:349801/1‑149 (MQ=255) | TACTTTTTTTGGGCGTTTCTGGCATAATCCGGCCACTTTTTTCGCTGTAGTAGTTTTTTCAAGACAACTACAAAACGTTTGGAGCACTCGGCCTCGGGCCGGATGGGGTATCTCATGA‑‑CGCAAGCCAACAACACCGTGTACACCGACCTGAGCGTCGATGAGCTGGTAAAAGAAGCGCTGCAACGCGGTGAAGGCGTACTAGCCGATACTGGCGCACTGGTCGTGGAGACTGGTCACCGTACCGGCCGTTCGCCGGCTGACCGTTTCATCGTCGAAGAACCTTCCACCCAGGAC > NC_002947/307051‑307344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |