| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,612,665 | G→C | 7.0% | intergenic (+1627/‑480) | hcpC‑II → / → PP_4084 | hemolysin‑coregulated protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,612,665 | 0 | G | C | 7.0% | 221.6 / 6.8 | 72 | intergenic (+1627/‑480) | hcpC‑II/PP_4084 | hemolysin‑coregulated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (33/34); new base C (2/3); total (35/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.88e-01 | |||||||||||
GATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCT > NC_002947/4612518‑4612813 | gatCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACACACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAgtgt > 8:304179/1‑149 (MQ=255) tCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTc < 5:256142/149‑1 (MQ=255) tCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTc < 1:123559/149‑1 (MQ=255) aCCGGGCGCACTTACTGCGGTGACAAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCa < 4:331803/148‑1 (MQ=255) ccGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATc < 7:304179/149‑1 (MQ=255) cGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATc > 1:217091/1‑148 (MQ=255) gcACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGTGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGcc > 3:291782/1‑149 (MQ=255) gcACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCAt > 6:90220/1‑142 (MQ=255) gcACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCAt < 7:109103/142‑1 (MQ=255) gcACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCAt < 5:90220/142‑1 (MQ=255) gcACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCAt > 8:109103/1‑142 (MQ=255) aCTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCATGGATGAACACTTCCTCCTTGCCCa < 5:151225/149‑1 (MQ=21) aCTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGcc > 5:118229/1‑147 (MQ=255) aCTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCa < 4:230219/149‑1 (MQ=255) cTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCag < 6:118229/149‑1 (MQ=255) aCTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCaga < 1:147037/147‑1 (MQ=255) gCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCaga > 4:122412/1‑144 (MQ=255) cGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATc < 3:248945/149‑1 (MQ=255) ggTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATc < 2:189861/148‑1 (MQ=255) ggTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATc > 1:189861/1‑148 (MQ=255) gTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTGATCCATGCCCAGAGAGAt > 8:369119/1‑146 (MQ=255) cAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAacac > 4:222387/1‑149 (MQ=255) tGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTg > 5:228789/1‑149 (MQ=255) ccgccTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGTGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGt < 4:291782/149‑1 (MQ=255) ccgccTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTg < 6:344646/147‑1 (MQ=255) cgccTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCAt > 8:152079/1‑118 (MQ=255) cgccTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCAt < 7:152079/118‑1 (MQ=255) ttACGATCTGTCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAAt > 1:364548/1‑148 (MQ=255) ttACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAAt > 7:38526/1‑148 (MQ=255) aagATCTGCCCGATCACAAAACACGCATGAACATCAAGAGCAAGACCCACAAGGGGGAAGGTTTCAACGACCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATca > 4:189466/3‑148 (MQ=255) aCGATCTGCCCGATCACATAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATca > 2:68591/1‑148 (MQ=255) gATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACaa > 6:134530/1‑149 (MQ=255) tGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAg > 4:272404/1‑149 (MQ=255) cccGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATc < 2:248383/139‑1 (MQ=255) tCAAAAAACACTCATGACCATCAAGATCCAGACCCACAAGTGGGAATGATTCAACGAGCTGCGTTTCGAGGATTAGATGTGCAAGGACGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCct < 5:274542/147‑1 (MQ=255) acaAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCctctct < 3:198680/149‑1 (MQ=255) acaAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCctctct < 3:122412/149‑1 (MQ=255) aaaaCACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCtgt > 3:327508/1‑149 (MQ=255) aaaCACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCtgtg > 7:201014/1‑149 (MQ=255) aaCACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTgg < 8:201014/149‑1 (MQ=255) aaCACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTgg < 8:314052/149‑1 (MQ=255) gCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTc > 2:214006/1‑149 (MQ=255) aTGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGa > 7:204348/1‑149 (MQ=255) tGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGaa > 6:244194/1‑106 (MQ=255) tGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGaa < 5:244194/106‑1 (MQ=255) ccATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCGCAACCAGTCCCTCTCTGTGGGCGTCGATCg > 4:86451/1‑148 (MQ=255) gagCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAAc < 8:185914/149‑1 (MQ=255) gCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGAACCTCTCTGTGGGCGTCGATCGCCCacaacat > 4:21819/1‑148 (MQ=255) aGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGtt > 5:334231/1‑149 (MQ=255) gACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTGATCCATGCCCaga > 6:274883/1‑80 (MQ=255) cacaAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCTGAACACTCTGGTCATTCACAACCAGTCGCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGc > 2:274219/1‑147 (MQ=255) caAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTTGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAgg < 3:295666/149‑1 (MQ=255) aaGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGa < 6:170678/149‑1 (MQ=255) gggAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTATGGTCAAACACACCCAGACCGTATATGTGGCGGTCGAACGCACCCAACAGGTTGGCCAGGCCGa > 2:126829/1‑148 (MQ=255) aaGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGATGGCCAGGACGAATCg < 6:228789/149‑1 (MQ=255) tCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGc < 3:222387/148‑1 (MQ=255) cAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGcc < 6:334231/148‑1 (MQ=255) gttcttggTTTCGATGTTGATCTGGGCAAGGAGGAAGTGTTCATCCATGCCCTTAGAGATCAGAACACTCTCGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTgg < 1:126829/142‑1 (MQ=255) gCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGcc < 5:134530/149‑1 (MQ=255) gtGCGGTTCGCGGATGAGCTGGGCAAGGAGGAGGTGTTGGTCCATGGCCAGAGTGATCAGAACCCTCTGGTCAGTCACGACGAGTGCCTCTGTGTGGGCGTCGCTCGCAGCCAGCGGGTTGGGCAGGACGACTCGGTCGCCATGGGGCg > 4:48413/2‑149 (MQ=255) cTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCg < 3:189466/149‑1 (MQ=255) ggATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTgc < 1:68591/149‑1 (MQ=255) ctctcTGGGCATGGATGAACACTTCCTCCTTGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGcgcg > 1:17248/5‑149 (MQ=38) aGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGcgtc > 7:270369/1‑149 (MQ=255) tcTGGGCATGGATGAACACTTCCTCCTTGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTc > 3:331246/2‑121 (MQ=38) tcTGGGCATGGATGAACACTTCCTCCTTGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTc < 4:331246/120‑1 (MQ=38) tcTGGGCATGGATGAACACTTCCTCCTTGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGcgcg < 2:17248/145‑1 (MQ=255) gggCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCgtcgtc > 4:117408/1‑148 (MQ=255) ggCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCgtcgtc > 7:127753/1‑147 (MQ=255) aaGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGc < 6:264340/149‑1 (MQ=255) aggaAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAAc < 7:369119/149‑1 (MQ=255) ggaAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAAc > 8:124247/1‑148 (MQ=255) aGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGaca < 4:327508/149‑1 (MQ=255) gtgtTCATCCATGCCCAGAGAGATCAGAACACTCTGGGCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGacac < 3:48413/149‑1 (MQ=255) gtTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCt > 5:240646/1‑149 (MQ=255) | GATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCT > NC_002947/4612518‑4612813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |