| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,773,122 | C→A | 9.0% | V2049F (GTC→TTC) ‡ | pvdD ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,773,122 | 0 | C | A | 9.0% | 228.6 / 10.1 | 76 | V2049F (GTC→TTC) ‡ | pvdD | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base C (35/34); new base A (3/4); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.11e-01 | |||||||||||
CCGACTTGGGGCAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAGCC > NC_002947/4772977‑4773269 | ccGACTTGGGGCAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCgg < 6:308027/149‑1 (MQ=255) ggggCAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTg > 6:355358/1‑149 (MQ=255) gggCAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTgg < 1:35640/149‑1 (MQ=255) gggCAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTg < 3:220595/148‑1 (MQ=39) ggCAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGc > 4:298375/1‑149 (MQ=255) gCAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCg > 4:233081/1‑149 (MQ=255) gCAGGTTCAACACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCg > 3:38818/1‑149 (MQ=255) cAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGa < 5:355358/149‑1 (MQ=255) cAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTTCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTGGCGCGCCATCTTGCCGTTGGCGGTGACCGGCAATTTGGCGagcagc < 4:358497/148‑1 (MQ=255) cACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCAt > 4:186849/1‑147 (MQ=255) aCCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAg < 4:382996/149‑1 (MQ=255) aCCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAg < 3:233081/149‑1 (MQ=255) ccGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAgg > 4:368515/1‑149 (MQ=255) cGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGt < 7:95536/149‑1 (MQ=255) tctcCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTgc < 4:370750/149‑1 (MQ=255) tcCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTgcgc > 4:115818/1‑149 (MQ=255) ccAGCTCGACGCCAGTTGCTGCTCCCGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGCGGTTGCGCGCCAACTTGCCGGTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCg < 4:88859/149‑1 (MQ=255) ccAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCg > 1:200986/1‑149 (MQ=255) aTCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCACGTGCGCCGGCAc > 4:143039/1‑149 (MQ=255) gACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCa < 3:298375/148‑1 (MQ=255) aCGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGc > 8:119672/1‑121 (MQ=255) cGCCAGTTGCTGCTCCTGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCg < 6:191802/121‑1 (MQ=37) cGCCAGTTGCTGCTCCCGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCg > 5:191802/1‑121 (MQ=37) ttGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCgg < 2:257010/149‑1 (MQ=255) gctgctCCTGCGACTTGCGCTGATCGACATACACCTGCCTGGCGGCGTTGTAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCggg < 7:269221/148‑1 (MQ=255) tgctCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGc > 4:13150/1‑147 (MQ=255) gctCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGGCGGCGCCATGTAATCGGGCagg > 4:288634/1‑147 (MQ=255) gctCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAg > 3:251804/1‑149 (MQ=255) tCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGcc < 6:360304/149‑1 (MQ=255) cAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCt > 3:198156/1‑149 (MQ=255) cAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCt < 7:26926/149‑1 (MQ=255) aGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACATGGCGTTGGCGGTGGCCGGCAACGTGGGGAGCAGCATAACGTGCGCCGGCCCCATGTTATACGGCCAGcccg > 1:199485/1‑147 (MQ=255) gcgGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGaaa < 2:200986/149‑1 (MQ=255) gAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATgc < 3:115818/149‑1 (MQ=255) cGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTTCCGGTGGCGGTGACCGGCAAGGTTGCCGGCAGCATCAGGTGCGCCGGCACCATGTTATAGGGCAACCCCGGCACGAGGCAAttcac > 8:126950/1‑144 (MQ=255) cGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATgcgc > 5:10636/1‑148 (MQ=255) cATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGt > 4:341752/1‑149 (MQ=255) ctACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGtt < 4:199436/148‑1 (MQ=255) ctgcctgGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCAc > 6:300388/1‑149 (MQ=255) cggcgTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGt > 1:264639/1‑134 (MQ=255) cggcgTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGt < 2:264639/134‑1 (MQ=255) gTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGc > 4:338412/1‑149 (MQ=255) tGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGGTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCAACATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGccc > 3:10717/1‑149 (MQ=255) gAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCg > 7:216860/1‑149 (MQ=255) aaaTCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCa > 6:343157/1‑88 (MQ=255) aaaTCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCa < 5:343157/88‑1 (MQ=255) aTCCGGTGCCGGCAAGAGGTGGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGGTGGCGAGCAGCATCAGGTGCGCCGTCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCt < 3:143039/149‑1 (MQ=255) cGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTg < 5:243156/72‑1 (MQ=255) cGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTg > 6:243156/1‑72 (MQ=255) ccGGCAAGAGGTTGCGCGCCAACTTGCCGTCGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGcc < 8:204869/148‑1 (MQ=255) cGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCg > 2:47893/1‑149 (MQ=255) ggCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCgg > 6:334519/1‑149 (MQ=255) aaGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATgc < 3:216690/105‑1 (MQ=255) aaGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATgc > 4:216690/1‑105 (MQ=255) aaGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTc < 2:199485/149‑1 (MQ=255) agagGGTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCACTGGCCCGCCTCGCTGCCCGGCTCg < 7:126950/149‑1 (MQ=255) tcgcCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTgg > 2:205188/2‑119 (MQ=25) tcgcCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTgg < 1:205188/118‑1 (MQ=25) tcgcCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGcc < 4:247699/142‑1 (MQ=38) tcgcCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCtagatt > 3:247699/2‑144 (MQ=38) gcCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGc < 2:136477/149‑1 (MQ=255) ccAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCa < 4:38818/149‑1 (MQ=255) aCTTGCCGTTGGCGGTGACCGGCAAGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCa > 5:152677/1‑146 (MQ=255) aCTTGCCGTTGGCGGTGACCGGCAAGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCa < 6:152677/146‑1 (MQ=255) cTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAAGGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGc > 8:344636/1‑147 (MQ=255) ttGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCAt > 6:249972/1‑149 (MQ=255) ttGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCAt > 7:367526/1‑149 (MQ=255) gCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCAt < 3:13150/147‑1 (MQ=255) gCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCAt < 4:251804/147‑1 (MQ=255) ccGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCgg < 3:288634/149‑1 (MQ=255) cGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCAGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTAGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGc < 1:283729/149‑1 (MQ=255) ttGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGcac > 8:358980/1‑149 (MQ=255) tGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAg < 7:358980/149‑1 (MQ=255) tGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAg > 7:336464/1‑149 (MQ=255) gACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAGc > 3:360470/1‑149 (MQ=255) aCCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAGc < 3:368515/148‑1 (MQ=255) ccGGGAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAGcc < 4:10717/148‑1 (MQ=255) | CCGACTTGGGGCAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCAAGAGGTTGCGCGCCAACTTGCCGTTGGCGGTGACCGGCAAGTTGGCGAGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAGCC > NC_002947/4772977‑4773269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |