| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,077,237 | A→C | 5.6% | intergenic (+32/+76) | PP_4470 → / ← mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,077,237 | 0 | A | C | 5.6% | 272.6 / 5.0 | 89 | intergenic (+32/+76) | PP_4470/mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base A (40/44); new base C (2/3); total (42/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01 | |||||||||||
CTGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCAT > NC_002947/5077089‑5077384 | cTGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTaa < 8:275300/149‑1 (MQ=255) tGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAg > 3:357349/1‑149 (MQ=255) ccTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTgg > 4:118220/1‑149 (MQ=255) cTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGCCGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGc > 7:165363/1‑149 (MQ=255) cTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGc > 5:140012/1‑149 (MQ=255) cATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCttt > 3:96243/1‑149 (MQ=255) cATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACAGTCCCACCGCCAGCAGCACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCttt < 8:214732/149‑1 (MQ=255) tGAGCGCGAGTTGCTGCAGCGTTTCAGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCttttt > 8:48532/1‑149 (MQ=255) aGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACAAAAAAGCCAGCTTACGCTGGCtttttc < 6:112789/148‑2 (MQ=255) gcgcGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTtgt < 5:213916/149‑1 (MQ=255) gcgcGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTtgt > 6:213916/1‑149 (MQ=255) gcgcGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTtgt > 6:64653/1‑149 (MQ=255) gcgcGAGTTGCTGCAGCGTTTCCACCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTtgt > 5:78234/1‑149 (MQ=255) cgcgAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTtgtg > 2:211821/1‑149 (MQ=255) gAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGc > 1:365863/1‑149 (MQ=255) tgcAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGAc > 2:10493/1‑149 (MQ=255) cAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACt < 3:118220/148‑1 (MQ=255) cAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTg > 4:350375/1‑149 (MQ=255) cAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTg < 5:211094/149‑1 (MQ=255) aGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTgg < 6:232237/149‑1 (MQ=255) aGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTgg < 7:214151/149‑1 (MQ=255) aGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCAACTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTgg > 8:268476/1‑149 (MQ=255) gCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTCGCTTTTTTGTGGGCG‑TCTGACTgg > 4:335027/1‑148 (MQ=255) cGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTCGCTTTTTTGTGGGCG‑TCTGACTGgca < 1:10493/149‑1 (MQ=255) cGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑t > 7:244321/1‑133 (MQ=255) cGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑t < 8:244321/133‑1 (MQ=255) cGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAgg < 3:253773/149‑1 (MQ=255) aCTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCAtt < 3:350375/149‑1 (MQ=255) gTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTcc > 5:122659/1‑149 (MQ=255) tCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTcc < 1:87365/148‑1 (MQ=255) ccACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTg > 7:299256/1‑149 (MQ=255) cACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGc > 4:330436/1‑149 (MQ=255) aCCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACAGGATATAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCg < 5:272126/149‑1 (MQ=255) ccGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCgg < 8:260558/149‑1 (MQ=255) gCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGa > 4:158607/1‑149 (MQ=255) gCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGa > 6:189099/1‑149 (MQ=255) agcagAACGCCTTGGTCGCACTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTATTGTGGCCG‑TCTGACTGGCAGCAAGGCAATTTACCTGCGGGATTg > 8:193886/1‑149 (MQ=255) gcagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGt > 5:19838/1‑149 (MQ=255) cagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGtt < 1:211821/149‑1 (MQ=255) cagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGt > 4:7048/1‑148 (MQ=255) agAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTc > 8:93391/1‑149 (MQ=255) aaCGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTccc < 7:48532/149‑1 (MQ=255) cTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGAAAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGAAGCAAGGCCATTTCCCTGCGGGATTGTTCACACAgg > 3:199352/1‑149 (MQ=255) ggTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGgga < 7:268476/148‑1 (MQ=255) gTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGggagg < 6:122659/149‑1 (MQ=255) gCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGAtt < 7:134384/149‑1 (MQ=255) gCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGAtt < 4:357349/149‑1 (MQ=255) ccTCATCGCTCACGATGTGGAACTGGCCGCAGACGCCTCCTCAGCGCTGCAGCGAACACTCAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTgg < 6:311374/149‑1 (MQ=255) ccTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTgg > 3:351990/1‑149 (MQ=255) cTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGc < 6:78234/149‑1 (MQ=255) aTCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCtt < 1:107185/149‑1 (MQ=255) aTCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCcaca > 2:281412/1‑134 (MQ=255) aTCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCt < 3:7048/147‑1 (MQ=255) aTCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTa < 6:19838/149‑1 (MQ=255) tggCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTac < 6:140012/147‑1 (MQ=255) cTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCcac < 5:265495/129‑1 (MQ=255) cTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCcac > 6:265495/1‑129 (MQ=255) tCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTACAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaa > 7:285906/1‑147 (MQ=255) aCGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaaca < 2:365863/147‑1 (MQ=255) tgtgGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACa < 5:256968/149‑1 (MQ=255) gAAATGGCCGCAGACGCCTCCTGATGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGAATGGCAGCAAGGCCATTTCGCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGt < 5:17461/149‑1 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAATCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGTATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGt < 1:233074/149‑1 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCg < 4:96243/148‑1 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGt < 1:178418/149‑1 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGt > 3:337747/1‑149 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGAAGGATTGGCTTACAACAGGAACAGCGt > 2:178418/1‑149 (MQ=255) aaTGGCCGCAGACGCCTCCTGAGTGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTg < 4:199352/148‑1 (MQ=255) gCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCGATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAg < 3:335027/149‑1 (MQ=255) ccGCAGACGCCTCCTGAGGGCTGCAGCGTACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGc < 7:193886/149‑1 (MQ=255) aGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCaa < 8:299256/149‑1 (MQ=255) cctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAg < 5:64653/149‑1 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt < 3:158607/147‑1 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATg > 3:43813/1‑148 (MQ=255) gAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATg > 6:40225/1‑146 (MQ=255) aGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTTGGCG‑TCTGACTGGCATCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaa < 3:258766/147‑1 (MQ=255) aGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaag < 5:189099/148‑1 (MQ=255) aGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaa < 5:286567/147‑1 (MQ=255) cAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAaccac < 4:370570/148‑1 (MQ=255) cGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaagaa > 3:11915/1‑140 (MQ=255) cGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaagaa < 4:11915/140‑1 (MQ=255) aaCACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGt > 6:240627/1‑149 (MQ=255) ccacaAAAAAGCCAGCTTACGCTGGCTTTTTCGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTc > 8:89639/2‑149 (MQ=255) cGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGt < 3:330436/149‑1 (MQ=255) aaaaaGCCAGCTTACGCTGGCTTTTTCGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTca < 7:89639/149‑1 (MQ=255) aaaaaGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTcc > 6:202901/1‑148 (MQ=255) aaaaGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTca > 5:155170/1‑148 (MQ=255) aaaGCCAGCTTACGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTca > 2:202326/1‑147 (MQ=255) aaaGCCAGCTTACGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTca < 1:202326/147‑1 (MQ=255) ccAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATCTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCAcagcag > 5:92945/1‑149 (MQ=255) cGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGa > 5:148270/1‑148 (MQ=255) aGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGatcat < 6:148270/148‑1 (MQ=255) | CTGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCG‑TCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCAT > NC_002947/5077089‑5077384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |