| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,079,126 | T→A | 6.7% | intergenic (‑371/+26) | mgtE ← / ← PP_t56 | magnesium transporter/tRNA‑Arg |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,079,126 | 0 | T | A | 6.7% | 282.5 / 5.7 | 97 | intergenic (‑371/+26) | mgtE/PP_t56 | magnesium transporter/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base T (39/51); new base A (3/4); total (42/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGC > NC_002947/5078981‑5079274 | tATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTAtt > 5:259550/1‑149 (MQ=255) aTCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTAtt > 3:311975/1‑148 (MQ=255) tCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTAtt < 4:43468/147‑1 (MQ=255) tCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGa < 3:2027/149‑1 (MQ=255) gTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCg > 1:320886/1‑149 (MQ=255) gCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCAATAGAGCgg < 2:50275/148‑1 (MQ=255) cgacgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCggg < 4:311975/148‑1 (MQ=255) acgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑tt < 7:312994/149‑1 (MQ=255) acgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCACAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑tt < 6:211746/149‑1 (MQ=255) cgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑ttt < 7:73631/149‑1 (MQ=255) gaTTGTTGTGGATGTGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑tttt > 5:255823/1‑149 (MQ=255) gaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑tttt < 1:196538/149‑1 (MQ=255) aTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑ttttt > 8:219367/1‑149 (MQ=255) aTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCAATAGAGCGGGC‑ttttt < 6:366589/149‑1 (MQ=255) ttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATg > 2:209441/1‑149 (MQ=255) ttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATg < 1:147775/149‑1 (MQ=255) ttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATg > 5:114088/1‑149 (MQ=255) tgGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATgggg < 5:237934/149‑1 (MQ=255) tgGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATggg < 6:114088/148‑1 (MQ=255) ggAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGTCAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGc < 1:71368/149‑1 (MQ=255) ggAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATgg < 6:46935/148‑1 (MQ=255) ggAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATgg < 3:190632/148‑1 (MQ=255) ggAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGc < 2:209517/149‑1 (MQ=255) gAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCg < 5:15579/149‑1 (MQ=255) aaaGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCg > 7:23732/1‑148 (MQ=255) aaaGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCg < 2:286134/148‑1 (MQ=255) aaaGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCg > 1:286134/1‑148 (MQ=255) cacaTTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACt > 8:281216/1‑148 (MQ=255) acaTTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACt > 3:344591/1‑147 (MQ=255) aTTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTcag > 7:178947/1‑148 (MQ=255) tttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTcagca < 5:119280/149‑1 (MQ=255) tttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCAATAGAGCGGGC‑ttttt < 8:64843/126‑1 (MQ=255) tttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCAATAGAGCGGGC‑ttttt > 7:64843/1‑126 (MQ=255) tttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCACAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGCATTTTTGATGGGGTATGGCGGACTcagc < 1:12072/149‑1 (MQ=255) ttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTcagcag > 5:76965/1‑149 (MQ=255) aTTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAt < 4:39367/149‑1 (MQ=255) tttttGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAt‑t > 6:19469/1‑149 (MQ=255) tGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGa < 3:335857/148‑1 (MQ=255) cgAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGa < 8:181621/147‑1 (MQ=255) aGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGG‑T‑TCGaatcc > 6:325853/1‑146 (MQ=255) ggCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑t < 6:259550/149‑1 (MQ=255) ggCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑t < 2:320886/149‑1 (MQ=255) gCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑Tg > 6:333879/1‑149 (MQ=255) gCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑Tg > 2:364918/1‑149 (MQ=255) cTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGG‑T‑TCGAATCC‑‑TGctga < 5:325853/149‑4 (MQ=255) ggCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGATCAAGAATTCATTGCCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TATTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCg > 8:229789/1‑149 (MQ=255) tCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGAATCAGCAGTAT‑TCGAA‑CC‑‑TGCGCCCGCTCGGtt > 6:275773/1‑149 (MQ=255) cAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGtt < 5:752/147‑1 (MQ=255) aaaCTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGt < 1:209441/149‑1 (MQ=255) aaCTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAt < 6:82806/123‑1 (MQ=255) aaCTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAt > 5:82806/1‑123 (MQ=255) aaCTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTa < 7:67976/149‑1 (MQ=255) aCTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAg < 2:348680/149‑1 (MQ=255) cTACCCCCCAAGCATTCCAGCAGAGCGTAGATCCACAGGCTCAACAATTCATTGGCGCCCAAACAAAAACCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGc < 4:322055/149‑1 (MQ=37) cacCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGa < 1:285294/149‑1 (MQ=255) cGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGt > 4:288723/1‑148 (MQ=255) gCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTAc > 5:129919/1‑149 (MQ=255) tCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGc > 8:204519/1‑120 (MQ=255) tCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGc < 7:204519/120‑1 (MQ=255) tCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTa < 4:90603/149‑1 (MQ=255) agaagaGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCt < 7:281216/149‑1 (MQ=255) agaagaGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCt > 1:16079/1‑149 (MQ=255) gagCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGc < 8:178947/149‑1 (MQ=255) gctgaGATCGACAGGCTCATGAATTCATTGGCTCACATACAAAAAGCGCGC‑TCTTTTGAGCGGGC‑TTTTTGTTGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCGGAGTACTCTATCCAGCTGAGCTa < 5:380896/145‑1 (MQ=25) gATCGACAGGCTCAAGAATTGATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCTTAGCCGAGTACTCTATCCAGCTGAGCTATGAGt < 8:23732/149‑1 (MQ=255) cGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCg > 3:93928/1‑149 (MQ=255) gACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGt > 1:22728/1‑149 (MQ=255) cAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCt > 8:106487/1‑137 (MQ=255) cAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCt < 7:106487/137‑1 (MQ=255) aGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGAt < 4:93928/149‑1 (MQ=255) gCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATgg < 2:16079/149‑1 (MQ=255) tCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCATCAATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATgg > 1:57719/1‑148 (MQ=255) tCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTa < 6:1853/115‑1 (MQ=255) tCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTa > 5:1853/1‑115 (MQ=255) tCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATg < 3:356079/135‑1 (MQ=255) tCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATg > 4:356079/1‑135 (MQ=255) tCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTa > 6:339666/1‑149 (MQ=255) aaGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGt > 5:249648/1‑149 (MQ=255) aaGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGAACGCTAGGTTAGTAGGCGTGTAAGCTATCCATCTGAGCTATGTGTCAGTGATGGTAGt > 1:236301/1‑149 (MQ=37) aaGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGAGAACGCACGCGTCGTCGCCGACTAAGCACTCCAGCCGCGATATCAGGACTTGATGGTAGt > 1:230688/1‑149 (MQ=255) gAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGttt < 7:219367/149‑1 (MQ=255) aTTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGAGATTGTAGttttttaa > 5:384545/1‑144 (MQ=255) cgcACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGtt < 6:76965/149‑1 (MQ=255) cgcACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGtt < 3:288723/149‑1 (MQ=255) acaaacaaAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGAGATTGGAAGTTTAAACCaagataac > 8:68979/1‑142 (MQ=18) aaacaaaAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCAc > 4:283038/1‑149 (MQ=255) caaaAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGTGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTgg < 6:255823/149‑1 (MQ=255) aataaGCCCGC‑TCTATTGATCGTGC‑TTTTTGATGGGGTATGGCTGACTCAGCAGGAT‑TGGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCATCTGTGCTATGAGTCCGTGATGGTATTTTTAGACCAGGTTACCACTGGc < 3:335466/146‑1 (MQ=21) aaaaaGCCCGG‑TCTATTGAGCGGGG‑TTTTTTATGGGGTTTGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGc < 2:22728/149‑1 (MQ=255) aaaaaGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGc < 1:364918/149‑1 (MQ=255) aaaaGCCCGC‑TCAATAGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTAGTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCt > 3:37289/1‑149 (MQ=255) aaaaGCCCGC‑TCAATAGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTa < 1:157216/140‑1 (MQ=255) aaGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGATCTAGAA‑CCATTTATTTCCCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGc < 1:126987/149‑1 (MQ=21) aaGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCtt > 7:318578/1‑148 (MQ=255) ccGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTg > 7:42444/1‑148 (MQ=255) gC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACt < 2:289153/145‑1 (MQ=255) gC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑GCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACt > 1:289153/1‑145 (MQ=255) tATTGAGCGGGC‑TTTTTGATGGGGTATGGAGGACTCAGAAGGAT‑TCGAA‑CA‑‑TGCGACCGCTCGGTTCTTAGACGAGTACTGGATAAAGGTGAGATATGAGTAAGTGATGTTAGTTTTAGAGGAGGTTACCGGTGGCTTAGTGAAATGGc > 8:247974/1‑149 (MQ=255) | TATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGC‑TCTATTGAGCGGGC‑TTTTTGATGGGGTATGGCGGACTCAGCAGGAT‑TCGAA‑CC‑‑TGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGC > NC_002947/5078981‑5079274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |