| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,351,345 | G→T | 7.9% | intergenic (+24/+52) | PP_4706 → / ← PP_4707 | hypothetical protein/OsmY‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,351,345 | 0 | G | T | 7.9% | 225.8 / 9.1 | 76 | intergenic (+24/+52) | PP_4706/PP_4707 | hypothetical protein/OsmY‑like protein |
| Reads supporting (aligned to +/- strand): ref base G (33/37); new base T (3/3); total (36/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.50e-01 | |||||||||||
ATGCGGCGTATGACGCGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTCGGTAAC > NC_002947/5351197‑5351489 | atgCGGCGTATGACGCGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACgg < 5:234125/149‑1 (MQ=255) cggcgTATGACGCGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGc < 3:345600/148‑1 (MQ=255) ggcgTATGACGCGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCa < 1:335964/149‑1 (MQ=255) gcgTATGACGTGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAg < 3:295637/149‑1 (MQ=255) cgcgCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGa < 7:306525/149‑1 (MQ=255) gcATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATg > 6:70233/1‑148 (MQ=255) gcATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATg > 7:325698/1‑148 (MQ=255) cccAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGt < 5:70233/148‑1 (MQ=255) cccAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGt < 7:198178/148‑1 (MQ=255) cgcATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATc > 1:366480/1‑148 (MQ=255) gcATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCCCGTGCCAGGGCtttttctt > 5:173324/1‑128 (MQ=255) gcATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCCCGTGCCAGGGCtttttctt < 6:173324/134‑7 (MQ=255) aTTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCAtt < 2:26677/149‑1 (MQ=255) aTTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGCGGCCA‑AAtggatt > 5:159838/1‑144 (MQ=255) aTTATCGCGACAGCCGTCCATTGGGGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGGGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCAtt < 8:289445/149‑1 (MQ=255) tCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTgg < 7:89564/148‑1 (MQ=255) acgatgtgCCGTACTTTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTGGAAAGCTATGTGATCGCGCGC‑AACCCGGTGTTTTGATCGCAAGAAAAATCCCTGTCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGc < 8:318699/141‑1 (MQ=255) gcgACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGcc < 1:208272/148‑1 (MQ=255) cgACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGCGGCCA‑AATGGATTTGGccac < 2:361563/149‑3 (MQ=255) gACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGCGGCCA‑AATGGATTTGGccact < 6:159838/149‑4 (MQ=255) ccGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGa > 8:330903/1‑148 (MQ=255) ccGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCAAGGGCCAGGGCTTCGATGAAAGTTGCCA‑AATCCATTTGGc > 7:318699/1‑140 (MQ=255) tCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCAAACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACAt > 1:309089/1‑149 (MQ=255) gAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCCCGTGCCAGGGCttt > 5:248704/1‑100 (MQ=255) gAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCCCGTGCCAGGGCttt < 6:248704/101‑2 (MQ=255) gAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCgg > 1:55650/1‑149 (MQ=255) gAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGAAGGGACATTCCTTATTCgg > 8:186733/1‑149 (MQ=255) gCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCt > 4:29085/1‑149 (MQ=255) gCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCt > 3:373079/1‑149 (MQ=255) ccTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCtt > 4:254428/1‑149 (MQ=255) tctGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCttt > 3:130281/1‑148 (MQ=255) tGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTc < 2:366480/147‑1 (MQ=255) tCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGcc < 8:325698/149‑1 (MQ=255) cTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGt > 2:224443/1‑149 (MQ=255) gCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGcc < 1:328103/97‑1 (MQ=255) gCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGcc > 2:328103/1‑97 (MQ=255) aGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACAt < 8:25004/149‑1 (MQ=255) ggAATGCTTCGTATGCGATGTGAGCGCGCGC‑AAGCCGGTGTTTTGAGCGCAAGAAAACGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTTGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACAtt < 6:313773/149‑1 (MQ=255) gAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTa > 4:370669/1‑149 (MQ=255) aTGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACg < 7:199567/149‑1 (MQ=255) aTGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACg > 8:80950/1‑149 (MQ=255) aTGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACg > 4:314497/1‑149 (MQ=255) gCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGct > 6:221951/1‑149 (MQ=255) ttCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGctct > 4:195305/1‑149 (MQ=255) ttCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGACAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGctct > 4:339494/1‑149 (MQ=255) cGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCtt < 3:29085/148‑1 (MQ=255) aGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGc < 4:373079/149‑1 (MQ=255) gATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATg > 5:366957/1‑149 (MQ=255) tCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGtt > 4:356118/1‑149 (MQ=255) tCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGt > 3:318651/1‑148 (MQ=255) gcgcgc‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCt < 5:221951/149‑1 (MQ=255) gcgc‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTg < 8:70471/149‑1 (MQ=255) cgc‑TACACGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTgg < 4:139422/149‑1 (MQ=255) cgc‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTgg > 6:316316/1‑149 (MQ=255) c‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTa < 7:330903/149‑1 (MQ=255) c‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCGTGACGCCTTTGATGTTCGTgg > 4:273957/1‑147 (MQ=255) cctgtgtATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATgc < 7:186733/146‑1 (MQ=255) ttGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCt > 8:355079/1‑149 (MQ=255) gAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTc > 3:319865/1‑149 (MQ=255) aGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAGAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTc > 1:294583/1‑149 (MQ=255) aGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCAc > 3:76649/1‑142 (MQ=255) aGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCAc < 4:76649/142‑1 (MQ=255) aGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTc < 3:254428/148‑1 (MQ=255) cgcAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACAATACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGc < 4:130281/149‑1 (MQ=255) aaGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCttt > 3:205864/1‑149 (MQ=255) aaGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCtt > 2:390873/1‑148 (MQ=255) aGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTc < 3:63994/149‑1 (MQ=255) gAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCt > 8:296197/1‑149 (MQ=255) aaGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGa < 1:181685/149‑1 (MQ=255) aGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGAt < 1:390873/149‑1 (MQ=255) ccTGGCACGGGCCAGGGCTTCGATGAAAATGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTCg < 3:240169/149‑1 (MQ=255) cTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTCgg < 7:80950/149‑1 (MQ=255) cTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTCgg < 3:314497/149‑1 (MQ=255) ggCCCGTGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAAt < 8:238697/118‑1 (MQ=255) ggCCCGTGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAAt > 7:238697/1‑118 (MQ=255) cACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTCGGTAAc < 3:370669/149‑1 (MQ=255) cACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTCGGTAAc < 4:319865/149‑1 (MQ=255) | ATGCGGCGTATGACGCGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGC‑AACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCA‑AATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTCGGTAAC > NC_002947/5351197‑5351489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |