| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,508,226 | C→G | 6.4% | intergenic (+80/‑170) | cycA → / → urtA | D‑alanine/beta‑alanine/D‑serine/glycine permease/urea ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,508,226 | 0 | C | G | 6.4% | 238.6 / 4.3 | 75 | intergenic (+80/‑170) | cycA/urtA | D‑alanine/beta‑alanine/D‑serine/glycine permease/urea ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (34/36); new base G (2/3); total (36/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 | |||||||||||
GCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAACGCCCTCCCCGCTTGCCCAACACCA > NC_002947/5508084‑5508371 | gCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCgg < 2:270756/148‑1 (MQ=255)gCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGc < 5:174126/149‑1 (MQ=255) cGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCTCACCGCGGcc < 2:281187/149‑1 (MQ=255) ggTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGGGCCCTTGTGTCGCGATGGGCCGCCGCGCGGccc > 6:327069/1‑149 (MQ=255) aCCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCCCGAAGGCACGGTGTACGCCCTCCG‑ATGTGGGAGCGCCCTTGGGTCGCGATGGGCCGCGGTGCGGcccatc < 7:152299/148‑4 (MQ=255) aCCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCGGTGCGGcccatc < 2:74591/148‑4 (MQ=255) ccTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATc < 3:192437/149‑1 (MQ=255) cTACCAGCTCGTACGCAGCCGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCCATcc > 4:287972/1‑149 (MQ=255) cTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGCATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCGGTGCGGcccatcgc < 1:92096/149‑6 (MQ=255) cTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATcc > 3:99532/1‑149 (MQ=255) tACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTATGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCt > 7:271185/1‑149 (MQ=255) ccAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCtgt > 1:113449/1‑149 (MQ=255) cAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCtgtg < 3:25650/149‑1 (MQ=255) cAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCtgtg < 6:328936/149‑1 (MQ=255) cAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCtgtg < 2:260682/149‑1 (MQ=255) cAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCtgtg < 8:160449/149‑1 (MQ=255) gTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGcacac > 3:326870/1‑148 (MQ=255) tACGCAGCAGGCGCCATCCCCGCACGGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGcacac > 1:204290/1‑148 (MQ=255) cagcagGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATc > 7:213369/1‑148 (MQ=255) gcagGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTACCACGAAGGCACGGTGTACGCCGTCCG‑AAGTGGGAGCGCCCTTGTGTCGCGATGGGCCGAACCGCGGACCCAATCATGTGCACACAAATCCa > 7:312240/1‑148 (MQ=255) agGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCa < 2:113449/149‑1 (MQ=255) gcgcCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAgg > 2:127010/1‑149 (MQ=255) cgcCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGTCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGc < 8:26763/149‑1 (MQ=255) aTCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCAcc > 4:366062/1‑148 (MQ=255) cccGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGccc > 6:341199/1‑114 (MQ=255) cccGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGccc < 5:341199/114‑1 (MQ=255) ccGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAgg > 7:139117/1‑140 (MQ=255) ccGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAgg < 8:139117/140‑1 (MQ=255) ccGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCt > 7:212431/1‑149 (MQ=255) gCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTgg < 4:99532/149‑1 (MQ=255) cAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGa < 8:212431/149‑1 (MQ=255) aC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGAt < 3:87273/149‑1 (MQ=255) c‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATc < 5:266309/149‑1 (MQ=255) ggCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATcc < 2:204290/149‑1 (MQ=255) gCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAAt < 7:120284/110‑1 (MQ=255) gCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAAt > 8:120284/1‑110 (MQ=255) gTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACg > 7:72399/1‑149 (MQ=255) gTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACg > 2:368749/1‑149 (MQ=255) ccTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCaa > 6:80203/1‑141 (MQ=255) ccTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCaa < 5:80203/141‑1 (MQ=255) ccTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCg > 7:15434/1‑148 (MQ=255) cccACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTaaa > 4:192324/1‑149 (MQ=255) ccACGAAGGCACGGTGTATGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAAc < 8:271185/149‑1 (MQ=255) ccACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAAc > 7:260469/1‑149 (MQ=255) ccACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAAc > 8:331068/1‑149 (MQ=255) ccACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAAc < 8:72399/149‑1 (MQ=255) aCGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAAcc > 8:39316/1‑148 (MQ=255) cGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGt < 6:99879/149‑1 (MQ=255) gAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTGGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTa < 6:91974/149‑1 (MQ=255) cACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCTAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCg < 4:342650/124‑1 (MQ=255) cACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCAAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCg > 3:342650/1‑124 (MQ=255) aCGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTaaa < 2:212160/131‑1 (MQ=255) aCGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTaaa > 1:212160/1‑131 (MQ=255) cGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTg > 4:86929/1‑89 (MQ=255) cGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGca < 8:260469/149‑1 (MQ=255) g‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGcc > 3:329847/1‑149 (MQ=255) tgGGAGCGCCCTTGTGTCGCGATTGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCGCTCTAAACCGTACCTTTCGCCAGTAGGCACAGcccat < 4:326870/148‑3 (MQ=255) tgGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCtt < 8:213369/148‑1 (MQ=255) tgGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTg < 6:325746/149‑1 (MQ=255) aGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAAc > 2:107492/1‑149 (MQ=255) ccTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTAc < 1:252327/115‑1 (MQ=255) ccTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTAc > 2:252327/1‑115 (MQ=255) ccTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAgg < 3:103903/129‑1 (MQ=255) ccTTGTGTCGAGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAgg > 4:103903/1‑129 (MQ=255) tCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAACGCCCTCCCCGCt > 1:214031/1‑149 (MQ=255) cgATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTa > 7:351283/1‑117 (MQ=255) cgATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTa < 8:351283/117‑1 (MQ=255) cgATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAACGCCCTCCCCGCTTGc < 7:39316/149‑1 (MQ=255) ttggggCCGCGGTGCGGCCCCAATCCTGTGCACCCAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAACGCCCTCCCCGCTTGcc > 7:210684/4‑149 (MQ=255) aTGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAACGCCCTCCCCGCTTGccc < 7:331068/149‑1 (MQ=255) ggCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAACGCCCTCCCCGCTTGCCCaa > 1:364743/1‑148 (MQ=255) ccGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAACGCCCTCCCCGCTTGCCCAacac < 3:366062/149‑1 (MQ=255) ccGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAACGCCCTCCCCGCTTGCCCAacac > 8:169251/1‑149 (MQ=255) gCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAACGCCCTCCCCGCTTGCCCAACACCa > 4:326250/1‑149 (MQ=255) gCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAACGCCCTCCCCGCTTGCCCAACACCa < 2:226081/149‑1 (MQ=255) | GCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCAC‑GGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCG‑ATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGTACCTTTCGCCACTAGGCACAGCCCTTGCAACGCCCTCCCCGCTTGCCCAACACCA > NC_002947/5508084‑5508371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |