| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,509,449 | G→C | 7.3% | A352P (GCC→CCC) | urtA → | urea ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,509,449 | 0 | G | C | 7.3% | 249.5 / 7.2 | 79 | A352P (GCC→CCC) | urtA | urea ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (35/37); new base C (4/2); total (39/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGC > NC_002947/5509303‑5509587 | ccTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGcc < 4:86681/149‑1 (MQ=255) cTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCg > 4:259520/1‑149 (MQ=255) cTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCg > 5:391822/1‑149 (MQ=255) cTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCg > 6:220750/1‑149 (MQ=255) cTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCg < 3:259520/149‑1 (MQ=255) cGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCggg < 6:246584/148‑1 (MQ=255) cGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCgg < 1:135684/147‑1 (MQ=255) gccaaggccaagGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCTCTGCCCggc > 7:23458/1‑146 (MQ=255) gccaaggccaagGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCa < 1:111533/149‑1 (MQ=255) ccaaggccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCag > 5:302285/1‑149 (MQ=255) caaggccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCTCGAAGCTCTGCCCGGCCagt > 2:201969/1‑148 (MQ=255) caaggccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCaga < 1:216088/149‑1 (MQ=255) caaggccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCa > 5:330123/1‑147 (MQ=255) ggccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGTAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCt < 8:301008/149‑1 (MQ=255) aaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTc > 8:45803/1‑147 (MQ=255) aggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCTCTGCCCGGCCAGTGCTTCgcg < 7:354099/149‑3 (MQ=255) aggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCTCTGCCCGGCCAGTGCTTCgcg < 8:23458/149‑3 (MQ=255) ggCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGgc > 2:37952/1‑149 (MQ=255) gCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGgcg > 6:176566/1‑149 (MQ=255) ccTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGgcgc < 8:48664/149‑1 (MQ=255) tGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCg > 3:169047/1‑149 (MQ=255) aGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCgg > 8:145308/1‑149 (MQ=255) ggTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGACCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCggg < 6:93033/149‑1 (MQ=255) cGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCa > 6:111606/1‑149 (MQ=255) gACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCAc > 4:152198/1‑149 (MQ=255) aCAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCAcc < 2:358962/149‑1 (MQ=255) ggCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGa < 5:56993/149‑1 (MQ=255) ccGTGACCAACGACCCCATGGAAGCCACCTACGGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGAc > 1:245959/1‑149 (MQ=255) cGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCa > 7:173052/1‑149 (MQ=255) gTGACCAACGTCCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCAt < 1:376256/149‑1 (MQ=255) gTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAACGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCAt < 4:221782/149‑1 (MQ=255) tGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATg > 6:388040/1‑149 (MQ=255) cGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGa < 6:391822/149‑1 (MQ=255) gACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACTATGGACAAGac < 4:281717/149‑1 (MQ=255) gACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGac < 5:220750/149‑1 (MQ=255) ccccATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGa > 6:109111/1‑134 (MQ=255) aaGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAaccaccac > 7:183368/1‑149 (MQ=255) gCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCt > 5:122494/1‑149 (MQ=255) cACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTg > 7:297400/1‑148 (MQ=255) aCCTAC‑GTGGGCATCGACATGTGTGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGca < 4:110515/149‑1 (MQ=255) ccTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCACCCACCACCTGca > 6:95883/1‑148 (MQ=255) cTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGcac > 3:261697/1‑148 (MQ=255) ggCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCgg < 5:388040/148‑1 (MQ=255) ccACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAaccaccac > 1:370620/1‑130 (MQ=255) ccACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAaccaccac < 2:370620/130‑1 (MQ=255) cacaTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTgatgat < 3:152198/149‑1 (MQ=255) caTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGCGCTTCACCCAGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGAGATGATCg > 8:43882/1‑149 (MQ=255) aTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCgg > 5:264722/1‑149 (MQ=255) gCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGAt > 7:228901/1‑149 (MQ=255) ccAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGAtt > 5:369806/1‑148 (MQ=255) cAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCa < 4:261697/149‑1 (MQ=255) cAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCa < 7:145308/149‑1 (MQ=255) ggCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAgg < 8:297400/149‑1 (MQ=255) ggCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAgg < 8:228901/149‑1 (MQ=255) ggCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCACCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAgg < 3:102669/149‑1 (MQ=255) gagaAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACgg > 8:317837/1‑149 (MQ=255) gagaAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACgg > 2:286309/1‑149 (MQ=255) aaGCCAAGTCCACTGACTTTGACAAGCTCCGCGAAGGACTGTCCTGGCAGAGCTTCGAGGCGCCGTCGTGCTTCACCATGACCATTGACAAGACCAACCACCACCTGCAAAAGCCGGTTATGATCGGCGAGATTCAGGATGACTGcct < 8:84043/148‑2 (MQ=255) ccAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGtt > 6:153715/1‑148 (MQ=255) cAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTgatgat > 3:214055/1‑120 (MQ=255) cAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTgatgat < 4:214055/120‑1 (MQ=255) aaGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAg > 4:266824/1‑149 (MQ=255) aGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGc < 6:302285/149‑1 (MQ=255) tCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCgt < 5:176566/149‑1 (MQ=255) tGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCTGCGAGAGTCAGGATGACGGCCAGTTCAGCGTGgtgt > 6:280997/1‑149 (MQ=255) aCGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGtgtg < 4:169047/148‑1 (MQ=255) aCGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGtgtg < 6:330123/148‑1 (MQ=255) aCGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGtgtg < 8:183368/148‑1 (MQ=255) aCGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTgg < 1:37952/149‑1 (MQ=255) gACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGAtt > 3:97828/1‑114 (MQ=255) gACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGAtt < 4:97828/114‑1 (MQ=255) gACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAAc > 7:260420/1‑149 (MQ=255) aCAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAAcc < 8:173052/149‑1 (MQ=255) aaGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGa < 6:369806/149‑1 (MQ=255) gTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGagc < 6:264722/148‑1 (MQ=255) ctcgAAGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGATCAGCGTGGTGTGGGAAACCGAGCAGcc > 5:365919/3‑149 (MQ=255) cgcgAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGagcagc < 6:122494/148‑1 (MQ=255) tcgAAGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGCCCATGGACAACACCAACCACCACCTGCACAAGCCGCAGCTGATCGCCGAGAATCAGGATGACGGCCAGAACCGCGAGGTGTGGGAAACCGAGCAGCCg > 7:234761/2‑149 (MQ=255) cgAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGc > 1:137798/1‑149 (MQ=255) | CCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAC‑GTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGC > NC_002947/5509303‑5509587 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |