| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,518,734 | T→A | 8.6% | K59N (AAA→AAT) ‡ | PP_4851 ← | phosphate starvation‑inducible protein PsiF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,518,734 | 0 | T | A | 8.6% | 198.3 / 8.0 | 83 | K59N (AAA→AAT) ‡ | PP_4851 | phosphate starvation‑inducible protein PsiF |
| Reads supporting (aligned to +/- strand): ref base T (33/42); new base A (4/3); total (37/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.18e-01 | |||||||||||
CTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGA > NC_002947/5518599‑5518880 | cttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCAAAGCGTTCa > 4:126/1‑145 (MQ=255)cttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCAAAGCGTTCa < 3:126/145‑1 (MQ=255)cttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCAAAGCGTTCAt < 7:210690/146‑1 (MQ=255) ttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGCTGCTCATGAAAGATTTTCGTTCATC‑Gc > 3:49986/1‑148 (MQ=255) cAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCttt < 3:31983/135‑1 (MQ=255) cAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑Gcc < 6:530/147‑1 (MQ=255) cAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCATTTTCAGGCAGGTGCTAATCAACGCttt > 4:31983/1‑135 (MQ=255) ggCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑GTTCATTTTTTCTTGCTGGGGTTGGGGCCCATCCTTTTTCAGGCAGGTGCTCATGAACGCATTGCGTTCATC‑GCCCtg > 7:153422/1‑147 (MQ=255) aagcGCTCATGAAGGCCTTGCGCTCATCCGCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCACGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAgg < 5:220801/146‑1 (MQ=255) aaTCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAgg < 8:47975/149‑1 (MQ=255) aaTCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAgg < 7:285261/149‑1 (MQ=255) aTGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTg < 5:174450/147‑1 (MQ=255) tGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTAGTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGc > 1:309691/1‑149 (MQ=255) tGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCg > 1:391055/1‑149 (MQ=255) gAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCATGT‑CTTCATTTTTTCTTGCTGGGATTGGTGCACATCATTTTTCAGGCAGGTGCTCATGAAAGCTTTGCGTTCATA‑GCCCTTGAGGGCCTTGGCgg > 3:123856/1‑149 (MQ=255) gAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCgg > 4:188770/1‑149 (MQ=255) aGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATTAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGTCGGTg > 7:108784/1‑149 (MQ=255) ggCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGG‑CTTCATTTTTTCTTGCTGGGGTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTgg < 6:146148/149‑1 (MQ=255) ttGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTc > 3:201124/1‑149 (MQ=255) gcgcgcATCCCCCTTCAGGGCGTTTGCGGTGTCGTCAGCATTGCAGTT‑CTTCCTGTTTTCTTGCATCGGTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCg < 6:355346/148‑1 (MQ=255) cTCATCCACCTTCAGGGCTTTGTTTGTTTCGTCAGCATTGGAGTT‑CTTCATTTTTTCTTGATGGGTTTGGTGTACATCCTTTTTGAGGCAGGTGCTCATGAAGGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGt < 8:108784/149‑1 (MQ=255) tcttCCCCCTTCAGGGCTTTGGGGGTGGCGTCAGGATTGCAGGT‑CTTCATTTTTTCTTGCTGTGTGTGCGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGtt < 7:248994/146‑1 (MQ=255) tCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑GTTCATTTTTTCTTGCAGCGTATGGGGAAACGGGGGTTTAAGGCAGGTGGTCATGACAGGTTTGAGTTCATC‑GAGCTTGAGGGAATTGTCGGTTGAGTCGGGGtt > 4:116921/1‑149 (MQ=255) tCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGTTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCATTGAGGGCCTTGGCGGTTGCGTCGGCGtt > 1:137720/1‑149 (MQ=255) aTCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑GTTCATTTTTTCTTGCTGGGTTTGGGGGACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTAATC‑GCCATTTAGTGCCTTGGCGGTGGAGTCGGCGTTGc > 5:265188/1‑149 (MQ=255) aTCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTgg > 7:351712/1‑131 (MQ=255) aTCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTgg < 8:351712/131‑1 (MQ=255) aTCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTg < 1:163682/148‑1 (MQ=255) aTCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGc > 3:109278/1‑149 (MQ=255) ccTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑ATTCATTTTTTCATGCTGGGTTTGGGTCTCATCCTATTTGAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGTCGTTTCAGGtt > 6:161660/1‑149 (MQ=255) ccgggCTTTGGGGGTGGCGTCAGCATTGCAGGT‑CTTCTTTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTc < 1:386101/146‑1 (MQ=255) cAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTc < 3:188770/148‑1 (MQ=255) cAGGGCTGTGGTGGGGGCGTCAGCATTGCAGGT‑CTTCTTTTTTTCTTGCTGGGGTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTc < 3:327128/148‑1 (MQ=255) gggCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATc > 4:241187/1‑149 (MQ=255) gggCGTTCGTGGTGGGGTCCGTTTTGCACGT‑CTTCATATTTTCTTGCTTGGTTTTGGGCACATCCTTTTTCAGGCATGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTttcttc < 6:338708/149‑1 (MQ=255) gtgggggCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCctg < 5:820/149‑1 (MQ=255) gtcgtggCGTATGCATTTCAGCT‑CTTCATTTTTTCTTGCTGTGTTTGGGGCACATCCCTTTTCAGGCATGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCct < 4:49986/145‑1 (MQ=255) tggtggCTTCAGCATTGGAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCGTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCctgc < 7:285540/149‑1 (MQ=255) ggtggCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCctgct > 5:234337/1‑149 (MQ=255) gtggCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCAGATCCTTTTTCAGGCAGGTGCTCATGAACGCCTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCctgccg < 3:116921/149‑3 (MQ=255) tCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCtttt > 1:153887/1‑136 (MQ=255) tCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCtttt < 2:153887/136‑1 (MQ=255) cAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTa > 6:192096/1‑149 (MQ=255) aGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGATCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTAt > 7:254785/1‑149 (MQ=255) gCATTTCAGGT‑CTTCTTTTTTTCTTGCTGGGTTTGGGTCACATGCTTTTTCAGGGAGTTGCTCATGAACGCTTTGCGTTCATC‑GCCCTCGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTAtt < 5:201674/149‑1 (MQ=255) ccttGGAGGT‑CCTGATTTTTTCTTGCTGTGGTTCTGGCACATGCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCGTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTg < 8:91740/147‑1 (MQ=255) aTTGCAGGT‑CTTCATTTTTTCTTGCTGGGGTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTgg < 3:34768/149‑1 (MQ=255) cAGGT‑CTTCATTTTTTCTTGCTGGGTTTGTGGCACATCCTTTTTCAGGCTTGTGCTGTTTTTCGCTTTGCGTTCATC‑GCCTTTGTGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAg < 5:162904/148‑1 (MQ=255) catttattCATTTTTTGTTGCTGGTTTTGGTGCACATCCTTTTTCATCCAGGTCATCATGAAGGGTTTGCGTTCTTC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAg < 2:68587/142‑1 (MQ=255) aGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGc > 3:385495/1‑148 (MQ=255) t‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGaaa < 4:385495/149‑1 (MQ=255) ttCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCa > 1:322381/1‑115 (MQ=255) ttCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCa < 2:322381/115‑1 (MQ=255) ttttttCTTGATGGTTGAGGTGGACATCCGTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCTTTGGCGGTGGCGTCGGCTTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTgg < 8:153422/149‑1 (MQ=255) ttttCTGGTTGGGTTTGTGGCACATCCTTTTTCATTCAGTTGCTAAGGAACGCTTTTCGTTCATC‑GCCCTTGAGGGCGTTGGCGGTGGCGTCGGCTTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTggg < 2:137720/148‑1 (MQ=255) ttGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTg > 6:339458/1‑148 (MQ=255) tGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGATCATGAACTCTTTGCGTTCATC‑GCCCTTGAGGGCCTTTGCGGTGGCGTCGGCGTTTCAGGTTTTCATCTTTTACTTCTGCGAGGTATTGGCAGCGAAACCTTGGGCACTGaa > 4:253709/1‑149 (MQ=255) gCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaa < 3:304739/148‑1 (MQ=255) cttggTTTCGTGCACATCCTTTTTCATTCAGGTCCTCATGAAGGCTTTGCGTTCATC‑GCCCTTGAGGGCTTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaac < 6:265188/145‑1 (MQ=255) cTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaac < 6:184474/148‑1 (MQ=255) tGGGTTTGGGGCACATCGTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTCGGCACTGaacaa > 4:231493/1‑149 (MQ=255) tGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaaca > 8:17919/1‑148 (MQ=255) tGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCATGCTGCTCGGTATTGGCAGCGAAACCTTGTGCACTGaacaa > 6:32756/1‑149 (MQ=255) gggTTTGGGGCACATCCTTTTTCAGGAAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaacaa > 1:209855/1‑148 (MQ=255) ggTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaacaa < 2:309691/147‑1 (MQ=255) ggggCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCTGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAAAAACACcgc > 1:288826/1‑149 (MQ=255) gggCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgcc < 2:391055/148‑1 (MQ=255) aTCCTTTTTCAGTCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTTGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgcca < 4:123856/149‑1 (MQ=255) aTCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgcca < 7:17919/149‑1 (MQ=255) aTCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgc > 6:137114/1‑147 (MQ=255) tCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgccag < 8:254785/149‑1 (MQ=255) tCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgccag > 3:13739/1‑149 (MQ=255) tCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgccag > 5:15371/1‑149 (MQ=255) aggcaggTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGAt < 5:137114/149‑1 (MQ=255) gcaggTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTAATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGAttt > 8:246691/1‑149 (MQ=255) gTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTgcag < 3:208254/149‑1 (MQ=255) gcgaTGAACGCAAAGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACg < 8:29402/133‑1 (MQ=255) gcgaTGAACGCAAAGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACg > 7:29402/4‑136 (MQ=255) tCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACt > 1:45578/1‑149 (MQ=255) cgaTGAACGCAAAGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACt > 6:354255/3‑149 (MQ=255) cATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGAAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACtt > 6:330690/1‑149 (MQ=255) aaCGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCa < 5:192096/148‑1 (MQ=255) gCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGa < 5:339458/149‑1 (MQ=255) gCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGa < 6:15371/149‑1 (MQ=255) gCTTTGAGTTCATC‑TCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGa < 5:161660/149‑1 (MQ=255) | CTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGT‑CTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATC‑GCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGA > NC_002947/5518599‑5518880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |