| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,566,957 | C→G | 7.7% | E177Q (GAA→CAA) | mutL ← | DNA mismatch repair protein MutL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,566,957 | 0 | C | G | 7.7% | 238.6 / 9.1 | 78 | E177Q (GAA→CAA) | mutL | DNA mismatch repair protein MutL |
| Reads supporting (aligned to +/- strand): ref base C (41/31); new base G (3/3); total (44/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.39e-01 | |||||||||||
CCATGAAGCCCGGGCCGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGTTTC > NC_002947/5566810‑5567104 | ccATGAAGCCCGGGCCGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTcc < 3:73815/149‑1 (MQ=255) cATGAAGCCCGGGCCGCAGATGGCACCCTCCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTcc < 7:118410/148‑1 (MQ=255) cATGAAGCCCGGGCCGCAGATGGCACCCACCCAGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTcc > 1:247056/1‑149 (MQ=255) cATGAAGCCCGGGCCGCAGATGGCACCCACCC‑TCCGTGCAAGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCt > 5:7075/1‑149 (MQ=255) cATGAAGCCCGGGCCGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTc < 5:256587/147‑1 (MQ=255) tGAAGCCCGGGCCGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCTTTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGc < 3:225524/149‑1 (MQ=255) aaGCCCGGGCCGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGc > 2:328356/1‑147 (MQ=255) gCCCGGGCCGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTGCAGGAAGt < 6:108527/149‑1 (MQ=255) gggCCGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATc < 5:45831/149‑1 (MQ=255) gCCGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTGCAGGAAGT‑GATccg < 3:84914/149‑3 (MQ=255) cGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTGCAGGAAGT‑GATccg < 1:110916/147‑3 (MQ=255) cGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTGCAGGAAGT‑GATccg > 2:110916/1‑145 (MQ=255) cGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAAt > 7:22694/1‑149 (MQ=255) cGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAAt > 7:280892/1‑149 (MQ=255) cGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCACGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAAt > 2:238472/1‑149 (MQ=255) gCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAAtt > 3:211874/1‑149 (MQ=255) gCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGtttt < 6:339451/149‑1 (MQ=255) cacccaccC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTc < 3:365615/124‑1 (MQ=255) cacccaccC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTc > 4:365615/1‑124 (MQ=255) acccaccc‑GCCGGGCACGGGCGATTTCTGCGTGGGCCTCGGGCAGGCTGAGGATGCGCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGACACGGGCCCGCGCCAGCCGCCGGAGCACTTCCTGCACGT‑GAGCGAATTC‑GGTTGtct < 6:132528/149‑1 (MQ=255) ccaccc‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGCATCACTTCCTGCAAGT‑GATCGAAGTC‑GGTTTTCTCg > 8:305205/1‑149 (MQ=255) caccc‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCgg < 1:111549/149‑1 (MQ=255) caccc‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCgg > 4:210570/1‑149 (MQ=255) cc‑gccgTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCtt < 6:19916/149‑1 (MQ=255) c‑gccgTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCttt > 7:29368/1‑149 (MQ=255) ccgTGCACGGGGGATTTCGTCGTGGGCCTCGTGCAGGCTGTGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCTACATCGAAACGGGCCAGCGCCAGCCGCCGGATTATTTCCTGCAAGT‑GATTCAATTC‑GGTTTTCTCGGCTTTGa < 7:59622/149‑1 (MQ=255) ccgTGCACGGGGGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGGCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGa < 7:138143/149‑1 (MQ=255) ccgTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGa < 3:210570/149‑1 (MQ=255) gggCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTg > 3:320190/1‑149 (MQ=255) gggCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTg > 4:13616/1‑149 (MQ=255) cGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTgcgc < 1:330412/149‑1 (MQ=255) tttCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTg > 6:143456/1‑149 (MQ=255) gtcgtGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCg < 4:211874/149‑1 (MQ=255) gtGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGTAACTTGCGCCTGGCCggg < 4:205359/148‑1 (MQ=255) gtGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCTCCTGGCCgggg < 6:7075/149‑1 (MQ=255) gtGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCgggg < 3:187153/149‑1 (MQ=255) gtGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCgggg < 2:247056/149‑1 (MQ=255) gtGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCggg < 1:328356/148‑1 (MQ=255) gtGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCggg < 1:238472/148‑1 (MQ=255) gCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTAtt < 7:56851/149‑1 (MQ=255) cTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGATATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCGGGCCGGGGTATTg > 4:284253/1‑148 (MQ=255) cTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTga < 2:317817/149‑1 (MQ=255) cGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTg > 5:329597/1‑146 (MQ=255) gTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTgaag > 8:299304/1‑148 (MQ=255) aGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACaa < 8:22694/149‑1 (MQ=255) gCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAAt > 4:168187/1‑149 (MQ=255) gCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAAt < 7:299304/149‑1 (MQ=255) gATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCa > 5:271470/1‑149 (MQ=255) gATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCa > 8:373572/1‑149 (MQ=255) gATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCAGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCgcgc > 5:276331/1‑148 (MQ=255) tctTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTc > 1:291893/1‑148 (MQ=255) tctTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTc > 3:328201/1‑148 (MQ=255) gcAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTaccgacc > 7:3831/1‑149 (MQ=255) gTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGt > 7:335856/1‑149 (MQ=255) tGGAAGCCGCCATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGGAAGG‑GATCGCATTC‑GGGTTTCTCGGCGTTGAGGGACTTGCGGCTGGGCGGGGTATTGAGGAACGAGTCGGGCACTTCCACGGCGGTACCGCCCggggg > 8:216658/1‑147 (MQ=255) aaGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTgcgc > 6:151218/1‑149 (MQ=255) ccGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGATTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGcgccgc > 4:16644/1‑149 (MQ=255) cGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGGATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGcgccgc > 1:289585/1‑149 (MQ=255) cGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCgccgcc < 1:143874/149‑1 (MQ=255) cGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCgccgcc > 1:276311/1‑149 (MQ=255) tCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTg > 3:283051/1‑149 (MQ=255) gAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTtc < 4:379759/58‑1 (MQ=255) gAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTtc > 3:379759/1‑58 (MQ=255) aaaCGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTCGGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCa > 1:96659/1‑149 (MQ=255) aaCGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCAcc > 5:272425/1‑149 (MQ=255) aaCGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCAcc > 3:315073/1‑149 (MQ=255) cGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCcg > 7:230060/1‑149 (MQ=255) gccagcgccagcCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCgcgg > 7:215128/1‑149 (MQ=255) ccagcgccagcCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCgcggc < 6:271470/149‑1 (MQ=255) ccagcgccagcCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCgcggc < 6:276331/149‑1 (MQ=255) ccagcgccagcCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCgcggc > 5:255146/1‑149 (MQ=255) ccagcgccagcCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCgcggc < 4:328201/149‑1 (MQ=255) agcgccagcCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGt > 7:243094/1‑149 (MQ=255) agcCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTc < 1:226951/149‑1 (MQ=255) ccgccgGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTcgc > 1:273734/1‑149 (MQ=255) cgccgGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTcgcg < 8:3831/149‑1 (MQ=255) ttcgATCACTTGCAGGAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGc > 1:212185/4‑149 (MQ=255) ccgGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGc < 4:315073/149‑1 (MQ=255) gATCACTTGCAGGAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTAAAGAACAAATCGTGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCtt > 6:12304/1‑149 (MQ=255) tCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCg < 4:283051/149‑1 (MQ=255) tCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCg > 7:38278/1‑149 (MQ=255) cACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCgg > 6:86044/1‑149 (MQ=255) aCTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGt < 2:291893/149‑1 (MQ=255) cTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGtt > 8:249797/1‑149 (MQ=255) ccTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTcgcg > 8:214222/1‑136 (MQ=255) ccTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTcgcg < 7:214222/136‑1 (MQ=255) ccTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGttt < 3:168187/147‑1 (MQ=255) ccTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGttt < 6:255146/147‑1 (MQ=255) ccTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGTTTc < 5:143456/148‑1 (MQ=255) | CCATGAAGCCCGGGCCGCAGATGGCACCCACCC‑GCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGT‑GATCGAATTC‑GGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGTTTC > NC_002947/5566810‑5567104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |