New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5145379 =	37 (1.040)	5 (0.150)	5/278	3.9	11.1%	intergenic (+20/+52)	PP_4531/srmB	hypothetical protein/ATP‑dependent DEAD‑box RNA helicase
	?	NC_002947	5145420 =	45 (1.310)					intergenic (+61/+11)	PP_4531/srmB	hypothetical protein/ATP‑dependent DEAD‑box RNA helicase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCCAAGCGCAAGCCTACTGCCAAGCCGAAAGCCAATGCGCCTCTGGCCAGTGCAGATGGCCTGGCACCGCTGAAGAAGCGCAAGCCTGCTGCTGAATAAGACTCACGCCGGCCCTTTGCAGAAGCGACGCAAGTTCGCATCTGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5145530‑5145379 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagggcCGGCGTGAGTCTTATTCAGCAGCAGGCTTGCGCTTCTTCAGCGGTGCCAGGCCATCTGCACTGGCCAGAGGCGCATTGGCTTTCGGCTTGGCAGTAGGCTTGCGCTTGGCGGCAGCTT  >  NC_002947/5145420‑5145537                                                                                                                                                                                                                                                                                CGCCAAGCGCAAGCCTACTGCCAAGCCGAAAGCCAATGCGCCTCTGGCCAGTGCAGATGGCCTGGCACCGCTGAAGAAGCGCAAGCCTGCTGCTGAATAAGACTCACGCCGGCCCTTTGCAGAAGCGACGCAAGTTCGCATCTGCGAA                                                                                                                            <  6:75633/148‑1  GCCAAGCGCAAGCCTACTGCCAAGCCGAAAGCCAATGCGCCTCTGGCCAGTGCAGATGGCCTGGCACCGCTGAAGAAGCGCAAGCCTGCTGCTGAATAAGACTCACGCCGGCCCTTTGCAGAAGCGACGCAAGTTCGCATCTGCGAAG                                                                                                                           <  4:185448/148‑1  GCCAAGCGCAAGCCTACTGCCAAGCCGAAAGCCAATGCGCCTCTGGCCAGTGCAGATGGCCTGGCACCGCTGAAGAAGCGCAAGCCTGCTGCTGAATAAGACTCACGCCGGCCCTTTGCAGAAGCGACGCAAGTTCGCATCTGCGAAG                                                                                                                           <  7:57046/148‑1                                                                                                                 CCCTTTGCAGAAGCGACGCAAGTTCGCATCTGCGAAGGGCCGGCGTGAGTCTTATTCAGCAGCAGGCTTGCGCTTCTTCAGCGGTGCCAGGCCATCTGCACTGGCCAGAGGCGCATTGGCTTTCGGCTTGGCAGTAGGCTTGCGCTTG            >  6:192515/1‑148                                                                                                                  CCTTTGCAGAAGCGACGCAAGTTCGCATCTGCGAAGGGCCGGCGTGAGTCTTATTCAGCAGCAGGCTTGCGCTTCTTCAGCGGTGCCAGGCCAT                                                                 >  4:48830/1‑94                                                                                                                   CTTTGCAGAAGCGACGCAAGTTCGCATCTGCGAAGGGCCGGCGTGAGTCTTATTCAGCAGCAGGCTTGCGCTTCTTCAGCGGTGCCAGGCCATC                                                                <  3:48830/94‑1                                                                                                                    TTTGCAGAAGCGACGCAAGTTCGCATCTGCGAAGGGCCGGCGTGAGTCTTATTCAGCAGCATGCTTGCGCTTCTTCAGCTGTGCCAGGCCATCTGCACTGGCCAGAGGCGAATTGGCTTTCGGCTTGGCAGTAGGCTTGCCCTTGGCG         >  8:79431/1‑148                                                                                                                           AAGCGACGCAAGTTCGCATCTGCGAAGGGCCGGCGTGAGTCTTATTCAGCAGCAGGCTTGCGCTTCTTCAGCGGTGCCAGGCCATCTGCACTGGCCAGAGGCGCATTGGCTTTCGGCTTGGCAGTAGGCTTGCGCTTGGCGGCAGCTT  <  5:192515/148‑1                                                                                                                                                                                                                                                                                CGCCAAGCGCAAGCCTACTGCCAAGCCGAAAGCCAATGCGCCTCTGGCCAGTGCAGATGGCCTGGCACCGCTGAAGAAGCGCAAGCCTGCTGCTGAATAAGACTCACGCCGGCCCTTTGCAGAAGCGACGCAAGTTCGCATCTGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5145530‑5145379 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagggcCGGCGTGAGTCTTATTCAGCAGCAGGCTTGCGCTTCTTCAGCGGTGCCAGGCCATCTGCACTGGCCAGAGGCGCATTGGCTTTCGGCTTGGCAGTAGGCTTGCGCTTGGCGGCAGCTT  >  NC_002947/5145420‑5145537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.