Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	196,351	0	C	G	31.6%	132.0 / 85.7	96	T619T (ACC→ACG)	PP_0168	putative surface adhesion protein
Reads supporting (aligned to +/- strand):  ref base C (30/35);  new base G (14/16);  total (45/51)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.65e-01
Rejected as consensus: Frequency below/above cutoff threshold.

ACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGC  >  NC_002947/196205‑196496                                                                                                                                                    |                                                                                                                                                  aCCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGTGAGCCCGTCGAGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATACTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCa                                                                                                                                                  >  1:290017/1‑149 (MQ=255)   cACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTa                                                                                                                                               <  2:321715/149‑1 (MQ=39)        tCAACGACTAGGTCGAAACCACTACCGCGTCCCTGAAGTCTTGACCGTAG‑GTTACCGAAGGGTGCGTGATCACTTACTCCGTGACCCTTAGCAATACTGCCCAGACGCCGGTGAAAGTGACCCTGTCCAACGGCCAAACCATTACCGtt                                                                                                                                          <  6:279273/149‑1 (MQ=11)           aCGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGaa                                                                                                                                       >  4:268528/1‑149 (MQ=39)            cGACTCGGTCTACACCACTACCGCGACCCTGACGGCGAGTCAGTCG‑GTCACCGAAGGCGTCGTGATCACTTACACCGTGAACCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGCCCCTGTCCAACGGCCAACCAATTACACTTGAAg                                                                                                                                      >  6:289923/1‑149 (MQ=14)             gACTCGGTCGACACCACTACCGCGACCCTGACGGTGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGc                                                                                                                                     <  2:290017/149‑1 (MQ=255)                  ggTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGc                                                                                                                                 >  5:162069/1‑148 (MQ=39)                  ggTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGc                                                                                                                                 <  2:199941/148‑1 (MQ=39)                    tCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCaaa                                                                                                                              <  2:291902/149‑1 (MQ=40)                        caccacTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAACCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCgg                                                                                                                                  >  4:307073/1‑141 (MQ=25)                        caccacTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAACCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCgg                                                                                                                                  <  3:307073/141‑1 (MQ=25)                           cacTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTAcc                                                                                                                                             <  1:347926/127‑1 (MQ=35)                           cacTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTAcc                                                                                                                                             >  2:347926/1‑127 (MQ=35)                           cacTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAgg                                                                                                                       >  3:252519/1‑149 (MQ=17)                            accaCCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAggg                                                                                                                      >  5:68993/4‑149 (MQ=0)                            accaCCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAggg                                                                                                                      <  6:215832/146‑1 (MQ=0)                            acTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAggg                                                                                                                      >  5:152203/1‑149 (MQ=37)                               aCCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAg                                                                                                                   >  6:84467/1‑149 (MQ=34)                               aCCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGTCAAACGATTACCGTTGAAGCCGGCAAAACCCAg                                                                                                                        <  5:375364/144‑1 (MQ=255)                               aCCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGTCAAACGATTACCGTTGAAGCCGGCAAAACCCAg                                                                                                                        >  6:375364/1‑144 (MQ=255)                                ccGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGc                                                                                                                  >  4:339074/1‑149 (MQ=34)                                 cgcgACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATAACCGTTGAAGCCGGCAAAACCCAGGGCAGCg                                                                                                                 >  5:12472/1‑149 (MQ=255)                                  gcgACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGt                                                                                                                >  3:320606/1‑149 (MQ=12)                                     aCCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGa                                                                                                             <  7:261904/149‑1 (MQ=34)                                      cccTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGAt                                                                                                            >  1:194139/1‑149 (MQ=34)                                      cccTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATAACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGac                                                                                                            <  6:12472/149‑2 (MQ=255)                                       ccTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGact                                                                                                           <  2:239136/149‑3 (MQ=12)                                        cagACGGCGAGCCTGTCG‑GTCACCGAAGGCGGCGTGATAACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACAGTGACACTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGact                                                                                                           >  4:135605/3‑146 (MQ=11)                                         tGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTc                                                                                                         >  3:179056/1‑149 (MQ=34)                                           aCGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGaa                                                                                                                                       >  3:219860/1‑117 (MQ=32)                                           aCGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGaa                                                                                                                                       <  4:219860/117‑1 (MQ=32)                                           aCGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTc                                                                                                         <  5:67641/147‑1 (MQ=255)                                           aCGGAGATCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGTCTCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCa                                                                                                       <  7:175377/149‑1 (MQ=255)                                             ggCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGa                                                                                                     <  4:148039/149‑1 (MQ=34)                                              gCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCa                                                                                                       <  2:129828/146‑1 (MQ=255)                                              gCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCa                                                                                                       >  1:129828/1‑146 (MQ=255)                                                     cGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGc                                                                                              >  4:135270/1‑148 (MQ=255)                                                      gTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGt                                                                                                                <  4:140079/129‑1 (MQ=35)                                                         g‑gTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAAt                                                                                          <  6:162069/148‑1 (MQ=34)                                                            tCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGAc                                                                                       >  7:104211/1‑149 (MQ=255)                                                              aCCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACGGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGt                                                                                     <  2:99575/149‑1 (MQ=21)                                                              aCCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCTAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACg                                                                                      <  3:339074/148‑1 (MQ=21)                                                              aCCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGt                                                                                     >  3:194967/1‑149 (MQ=34)                                                                cGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTc                                                                                    >  5:135914/1‑148 (MQ=255)                                                                 gAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATg                                                                                         >  3:50887/1‑142 (MQ=34)                                                                 gAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATg                                                                                         <  4:50887/142‑1 (MQ=34)                                                                 gAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTa                                                                                  >  6:105113/1‑149 (MQ=255)                                                                  aaGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTac                                                                                 <  4:297192/149‑1 (MQ=255)                                                                        gcgTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACaacaac                                                                           <  6:68993/149‑1 (MQ=255)                                                                         cgTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTac                                                                                 >  6:175449/1‑142 (MQ=34)                                                                         cgTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTac                                                                                 <  5:175449/142‑1 (MQ=34)                                                                         cgTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACg                                                                          <  5:84467/149‑1 (MQ=34)                                                                         cgTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACg                                                                          <  4:320606/149‑1 (MQ=255)                                                                             aTCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGa                                                                                        <  4:369016/131‑1 (MQ=34)                                                                             aTCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGa                                                                                        >  3:369016/1‑131 (MQ=34)                                                                                aCTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAggg                                                                                                                      <  6:288716/98‑1 (MQ=11)                                                                                    acacCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGt                                                                <  6:126669/148‑1 (MQ=34)                                                                                    acacCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGt                                                                <  4:194967/148‑1 (MQ=34)                                                                                     cacCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGt                                                                >  4:128702/1‑147 (MQ=34)                                                                                     cacCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCa                                                              <  2:194139/149‑1 (MQ=34)                                                                                     cacCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCa                                                              <  2:160407/149‑1 (MQ=255)                                                                                      acCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAg                                                             >  5:189391/1‑149 (MQ=255)                                                                                       tcGTGACCCTGAGCAACCCTGACCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGATGAAGCCTGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAgc                                                            <  6:359092/148‑2 (MQ=11)                                                                                        cGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCa                                                                                                       <  3:63537/105‑1 (MQ=32)                                                                                        cGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCa                                                                                                       >  4:63537/1‑105 (MQ=32)                                                                                        cGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCa                                                                                                       >  1:118225/1‑105 (MQ=11)                                                                                        cGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCa                                                                                                       <  2:118225/105‑1 (MQ=11)                                                                                          tGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACTGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACaacaac                                                                           <  7:249400/131‑1 (MQ=17)                                                                                          tGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTc                                                         <  7:177943/149‑1 (MQ=37)                                                                                            aCCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCAc                                                       >  1:100945/1‑149 (MQ=37)                                                                                            aCCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCAc                                                       <  5:105113/149‑1 (MQ=11)                                                                                              ccTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCa                                                                                                       >  4:370601/1‑99 (MQ=33)                                                                                              ccTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCa                                                                                                       <  3:370601/99‑1 (MQ=33)                                                                                                       tCCTGCCCAGACGCCGGTGACAGTGACACTGTCCAACGGCCAAACCATTAACGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACg                                            >  3:168770/1‑149 (MQ=255)                                                                                                        ccTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGc                                           >  7:70369/1‑149 (MQ=37)                                                                                                         cTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGc                                           <  4:179056/148‑1 (MQ=37)                                                                                                          tGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCa                                         >  7:13567/1‑149 (MQ=37)                                                                                                            cccAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCAcc                                       <  6:152203/149‑1 (MQ=38)                                                                                                                 aCGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTac                                                                                 <  6:43045/102‑1 (MQ=255)                                                                                                                 aCGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTac                                                                                 >  5:43045/1‑102 (MQ=255)                                                                                                                   gCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGt                                 >  2:94579/1‑148 (MQ=39)                                                                                                                           cAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGa                         <  7:155258/148‑1 (MQ=38)                                                                                                                              tGACCATGTCCAACGCCCAAACCATTACCGTTGAAGCCGGCAAAACCCCGGGCAGCGTCGATTTCCAGACCCCGGCGAATGCCGTCTACAACAACGGTTCGACTGTCAGTGTCCCCATCGAGAAATCCACCCGCGGTAATTTCCAGaaa                     >  4:232100/1‑149 (MQ=11)                                                                                                                                aCCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACt                   >  6:370822/1‑149 (MQ=37)                                                                                                                                 cccTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAAc                                             >  6:254930/1‑122 (MQ=35)                                                                                                                                 cccTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAAc                                             <  5:254930/122‑1 (MQ=35)                                                                                                                                  ccTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGa                                                                    <  6:310169/98‑1 (MQ=16)                                                                                                                                  ccTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGa                                                                    >  5:310169/1‑98 (MQ=16)                                                                                                                                  ccTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGa                 <  3:128702/149‑1 (MQ=37)                                                                                                                                  ccTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGa                 >  5:241443/1‑149 (MQ=37)                                                                                                                                        cAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTg                                                                 <  7:32345/95‑1 (MQ=33)                                                                                                                                        cAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCg            >  2:363173/1‑148 (MQ=37)                                                                                                                                         aaCGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGaa          <  7:50302/149‑1 (MQ=37)                                                                                                                                           cGGACAAACCATTACCGTTGTAGCCTGCAAAACCCACTGCAGCGTCGATTTCCAGACCCCGGCGAATGAAGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGTGGTAATTTCGAGCAACTGACCCCGAATc        <  3:232100/149‑1 (MQ=11)                                                                                                                                              ccAAACCATTACCGTTGAAGCCGGCAAATCCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGa     >  5:149438/1‑149 (MQ=255)                                                                                                                                                 aaCCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGc  <  1:94579/149‑1 (MQ=39)                                                                                                                                                    |                                                                                                                                                  ACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCG‑GTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGC  >  NC_002947/196205‑196496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑