Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	6,013,885	T→C	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,013,885	0	T	C	100.0%	182.9 / NA	54	intergenic (+90/+20)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (27/27);  total (27/27)

AATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATC  >  NC_002947/6013740‑6014027                                                                                                                                                  |                                                                                                                                                aaTCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATAGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCAAAGGTCTCGAACGCTGTGACGTTCCAGTAGGAGCGGGCGTGCCCGc                                                                                                                                               >  6:373195/1‑148 (MQ=38)         gCCCGGGTGAAGTCGCTGGACGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCg                                                                                                                                     <  4:67791/149‑1 (MQ=255)              ggTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAAcc                                                                                                                                >  2:249807/1‑149 (MQ=255)                       gggggACGGTGGTGGGGACCGCTCCATCAAAAACCCGCGACACCTGCTCCGGGGCCCCCCCGGCCCCCACCGGTGCCGCCCTGCCCCCCCCCGCTGGGCCGTACCGGGGGGCGGGGGCGGGCCCGCGAAT‑GGCCGCAACCCTTTTATCt                                                                                                                       <  4:206411/146‑1 (MQ=255)                                          aGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGcc                                                                                                    <  7:29056/149‑1 (MQ=255)                                                 tCGAATAAACGCGACACCTGCTTCGCGGGCCCGCCCCCGCCCACACGTGCCCCACCGGGCTCGAACCCGATGGCGGTCCGGGGGGCGCGGGCGGGGCCGCGAATGGGCCGC‑CCCCGGTTTTCTGGTTGCCGCCCCCCCCGCccacaacc                                                                                             >  2:121724/1‑148 (MQ=255)                                                                  cTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttct                                                                            >  5:193071/1‑149 (MQ=255)                                                                     cTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttctt                                                                           <  2:302688/147‑1 (MQ=255)                                                                          ggggCACGCCCGCTCAAACAGGTGAAGAACTGTTCTCTTACGCTGTGCCTTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTa                                                                      <  5:240785/146‑1 (MQ=255)                                                                             gCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGccc                                                                 <  4:41646/149‑1 (MQ=255)                                                                               aCGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAg                                                                                >  4:358738/1‑132 (MQ=255)                                                                                 gCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                             >  3:290206/1‑149 (MQ=255)                                                                                   ccGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTcttctt                                                                        <  1:304636/136‑1 (MQ=255)                                                                                   ccGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTcttctt                                                                        >  2:304636/1‑136 (MQ=255)                                                                                   ccGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTTAGCCCCTGCgg                                                           >  7:136496/1‑149 (MQ=255)                                                                                      ccccccCAGGTGCAGCACAGGTCTCCACCGCTGGGCCGTACCTGGGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTg                                                        <  5:46806/147‑1 (MQ=255)                                                                                       tCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCaa                                                                                                                                  <  3:220689/74‑1 (MQ=255)                                                                                       tCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCaa                                                                                                                                  >  4:220689/1‑74 (MQ=255)                                                                                       tCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                       >  2:345033/1‑149 (MQ=255)                                                                                         cgagaGGTGCTGCACTGGTCTGGAAGGCTGTGCCGTACCTTTGGGAGCGGGCGTGCCCGCGAAT‑GTCCGCAACCCTTTTATCTGGTTGCCGCCAGCGCGGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                       <  4:226190/143‑1 (MQ=255)                                                                                         ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaacaa                                                                                               >  5:172336/1‑107 (MQ=255)                                                                                         ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaacaa                                                                                               <  6:172336/107‑1 (MQ=255)                                                                                         ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                     <  1:231823/149‑1 (MQ=255)                                                                                         ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                     >  2:231823/1‑149 (MQ=255)                                                                                         ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                     >  2:244475/1‑149 (MQ=255)                                                                                         ccACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                     >  3:273973/1‑149 (MQ=21)                                                                                          cacaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcccc                                                    <  1:249807/149‑1 (MQ=255)                                                                                          cacaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                     >  4:352895/1‑148 (MQ=255)                                                                                           acaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcccc                                                    >  5:275525/1‑148 (MQ=255)                                                                                                ggcagcaCAGGGCTCGAACGCTGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGc                                              <  7:130193/148‑1 (MQ=255)                                                                                                 gcagcaCAGGGCTCCACCGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGAAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGc                                              <  7:135659/148‑1 (MQ=39)                                                                                                  cagcaCAGGTCTCGAACGCTGTGCCGTACCTGGGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCAt                                            <  7:287380/149‑1 (MQ=255)                                                                                                     cacaGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCg                                         >  2:113665/1‑149 (MQ=255)                                                                                                     cacaGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCg                                         >  2:112925/1‑149 (MQ=255)                                                                                                      acaGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGc                                        <  6:275525/149‑1 (MQ=255)                                                                                                           tctcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAg                                   >  2:172807/1‑149 (MQ=255)                                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGc                                                                                                                                    >  2:92800/1‑50 (MQ=255)                                                                                                               gAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTgg                               >  7:369453/1‑149 (MQ=255)                                                                                                                aaCGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGc                              <  6:193071/149‑1 (MQ=255)                                                                                                                  cgatgtgCCGTACCTGTGGGAGCGGGCGTGCCCGCTAAT‑GGCCGCAACCCTTTTATCTTGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCtt                            <  3:283597/146‑1 (MQ=255)                                                                                                                      gtgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCa                         >  5:357498/1‑148 (MQ=255)                                                                                                                       tgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATa                       <  1:345033/149‑1 (MQ=255)                                                                                                                       tgCCGTACCTGGGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCa                         <  5:373195/147‑1 (MQ=255)                                                                                                                            caCCTGTGGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAccc                    <  4:273973/146‑1 (MQ=255)                                                                                                                                 gtgGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTc                 <  4:289597/145‑1 (MQ=255)                                                                                                                                 gtgGGAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTc                 >  3:289597/1‑145 (MQ=255)                                                                                                                                    ggAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                       <  5:326729/104‑1 (MQ=255)                                                                                                                                    ggAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                       >  6:326729/1‑104 (MQ=255)                                                                                                                                    ggAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGcccc          >  5:91238/1‑149 (MQ=255)                                                                                                                                    ggAGCGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGcccc          >  7:233621/1‑149 (MQ=255)                                                                                                                                        cGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTg      <  1:112925/149‑1 (MQ=255)                                                                                                                                        cGGGCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTATAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTg      <  4:203726/149‑1 (MQ=255)                                                                                                                                           gCGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCAt   >  3:326496/1‑149 (MQ=255)                                                                                                                                            cGTGCCCGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATc  <  4:290206/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                AATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAAT‑GGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATC  >  NC_002947/6013740‑6014027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑