Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 503,825 Δ1 bp 10.5% intergenic (+28/‑123) PP_0414 → / → rpe polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947503,8250G.10.5% 173.0 / 14.6 57intergenic (+28/‑123)PP_0414/rpepolyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
Reads supporting (aligned to +/- strand):  ref base G (30/21);  new base . (2/4);  total (32/25)
Fisher's exact test for biased strand distribution p-value = 3.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.79e-01

CTGAGCCCGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCC  >  NC_002947/503678‑503970
                                                                                                                                                   |                                                                                                                                                     
cTGAGCCCGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCTGCCTCTTcgc                                                                                                                                                      <  1:29533/149‑1 (MQ=255)
    gCCCGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTGCCGGCCTCTTCCGGCtt                                                                                                                                                 >  4:139196/1‑148 (MQ=255)
       cGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTaaa                                                                                                                                               <  5:164634/149‑1 (MQ=255)
       cGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTaaa                                                                                                                                               <  2:167940/149‑1 (MQ=255)
         aCCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGc                                                                                                                                             <  8:221912/149‑1 (MQ=255)
               gCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGaa                                                                                                                                       <  2:41502/148‑1 (MQ=255)
                ccGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGaa                                                                                                                                       >  3:221752/1‑147 (MQ=255)
                ccGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTACCTGTGCCGGCCTCTTCCGGCTTTAGCCGCGAaga                                                                                                                                     <  2:240608/149‑1 (MQ=38)
                 agcggaggcgACCTTGCTTATTGCGTTCTCGGTGTTGTTGCTGCTGACCGTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAagag                                                                                                                                    <  6:198749/148‑1 (MQ=255)
                   cggcggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTGCCGGCCTCTTCCGGCTTTAGCCGCGAAGAGGc                                                                                                                                  <  3:139196/149‑1 (MQ=38)
                                gCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTGCCGGCCTCTTCCGGCTTTAGCCGCGAAGAGGCCGGTACAggcaa                                                                                                                      <  8:124577/148‑4 (MQ=37)
                                gCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGtt                                                                                                                       <  6:260649/147‑1 (MQ=255)
                                  tGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGt                                                                                                                   >  4:83496/1‑149 (MQ=255)
                                       gCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGt                                                                                                               <  5:69771/148‑1 (MQ=255)
                                           tctcGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCgg                                                                                                                                                    <  2:98483/108‑1 (MQ=255)
                                           tctcGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCgg                                                                                                                                                    >  1:98483/1‑108 (MQ=255)
                                              cGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGTGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGcac                                                                                                                            >  1:190708/1‑128 (MQ=255)
                                              cGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGcac                                                                                                                            <  2:190708/128‑1 (MQ=255)
                                               ggTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCaa                                                                                                      >  3:104788/1‑149 (MQ=255)
                                                   ttgttgCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑Ga                                                                                                <  3:83496/149‑1 (MQ=255)
                                                      ttgCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTcgcg                                                                                                                                                     <  5:137833/96‑1 (MQ=255)
                                                      ttgCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTcgcg                                                                                                                                                     >  6:137833/1‑96 (MQ=255)
                                                       tgctgcTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATAc                                                                                            >  8:62781/1‑148 (MQ=255)
                                                         ctgctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCaa                                                                                         <  4:47628/149‑1 (MQ=255)
                                                            ctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCaa                                                                                                      <  8:59959/136‑1 (MQ=255)
                                                            ctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCaa                                                                                                      >  7:59959/1‑136 (MQ=255)
                                                                 ccTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCtt                                                                                 >  4:108049/1‑149 (MQ=255)
                                                                 ccTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCt                                                                                  >  4:40262/1‑148 (MQ=255)
                                                                 ccTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTACCTGTGCCGGCCTCTTCCGGCTTTAGCCGCGAagag                                                                                                                                    >  6:202853/1‑101 (MQ=25)
                                                                 ccTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTACCTGTGCCGGCCTCTTCCGGCTTTAGCCGCGAagag                                                                                                                                    <  5:202853/101‑1 (MQ=25)
                                                                   tGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTc                                                                                >  6:107305/1‑148 (MQ=255)
                                                                           ttGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTc                                                                       <  3:239969/149‑1 (MQ=255)
                                                                               gTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCg                                                                                                                    >  5:45102/1‑103 (MQ=255)
                                                                                        gCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCa                                                                                                       >  8:42626/1‑107 (MQ=255)
                                                                                        gCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCa                                                                                                       <  7:42626/107‑1 (MQ=255)
                                                                                                   aGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCg                                               >  6:177465/1‑149 (MQ=255)
                                                                                                     gACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGt                                              <  4:104788/148‑1 (MQ=255)
                                                                                                      aCTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTg                                             >  7:8283/1‑148 (MQ=255)
                                                                                                       cTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGaa                                           >  2:165568/1‑149 (MQ=255)
                                                                                                        tCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCCGCACAGGTTGCGTTGGTCGACACAAATT‑‑GATACCAATCAGACTTCATCGCTATCCCTGAGTTACAATGCGCGCCACCGTGAAt                                          >  7:196810/1‑149 (MQ=255)
                                                                                                            cAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGc                                      <  7:62781/149‑1 (MQ=255)
                                                                                                               ccGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCaa                                   <  5:177465/149‑1 (MQ=255)
                                                                                                               ccGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCaa                                   <  3:40262/149‑1 (MQ=255)
                                                                                                                         gatgGCTTGCCTGTACAGGCCTCTTCGCGGCTAAAGCCGGAAGCGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTTCAATGCGCGCCACCGTGAATTTGCCAACAGGTgcgc                          >  5:24975/1‑148 (MQ=255)
                                                                                                                          atgGCTTGCCTGTACCGGCCTCTTCGCGGCTAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGAGCCAt                       >  6:82370/1‑149 (MQ=255)
                                                                                                                             gCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATgcgcgc                                                    >  2:12297/1‑118 (MQ=255)
                                                                                                                             gCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATgcgcgc                                                    <  1:12297/118‑1 (MQ=255)
                                                                                                                             gCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATg                      <  3:108049/148‑1 (MQ=255)
                                                                                                                                   cTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGGGAGAACAAAACAGCGTTCTGCGGTTTCCGTGAGTAACAATCGGGGCCACCGTGATTTTGCAAACAGTTGCCCATGCAggc                 >  1:218972/1‑147 (MQ=255)
                                                                                                                                    tGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTgcgc                          >  3:229929/1‑137 (MQ=255)
                                                                                                                                    tGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTgcgc                          <  4:229929/137‑1 (MQ=255)
                                                                                                                                        ccGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGc           >  5:225083/1‑148 (MQ=255)
                                                                                                                                         cGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTa         >  4:122601/1‑149 (MQ=255)
                                                                                                                                          ggCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTAt        >  2:147858/1‑149 (MQ=255)
                                                                                                                                           gCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTAtt       >  4:2426/1‑149 (MQ=255)
                                                                                                                                             ctctTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGc     >  2:257889/1‑149 (MQ=255)
                                                                                                                                              tctTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGcc    >  3:155679/1‑149 (MQ=255)
                                                                                                                                              tctTCGCGGCTAAAGCAGGAAGAGGACGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGcc    >  6:98895/1‑149 (MQ=255)
                                                                                                                                                ttCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGcccg  >  5:261493/1‑148 (MQ=255)
                                                                                                                                                ttCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGcccc  >  3:192957/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CTGAGCCCGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATT‑‑GATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCC  >  NC_002947/503678‑503970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: