| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 838,003 | Δ1 bp | 8.7% | intergenic (‑39/+41) | pth ← / ← rplY | peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 838,003 | 0 | G | . | 8.7% | 215.6 / 14.4 | 69 | intergenic (‑39/+41) | pth/rplY | peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc |
| Reads supporting (aligned to +/- strand): ref base G (34/29); new base . (2/4); total (36/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.31e-01 | |||||||||||
GCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGCGACGAACTCTACGCCTTTCGGAG > NC_002947/837856‑838150 | gCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTgcgc > 6:36623/1‑149 (MQ=255) tGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGC‑CGCGCGCACTg < 5:178487/149‑1 (MQ=255) cAAGGCGTTCCCCGACAAGAGCCCCTGCGTTATGCCGGGTCTGTGCGTATTCGGGGCCGGGGGTACCCAGGCCAACGAGCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGGTGGTGGGTTACAGTGCGCGCG‑GCACTGTaa < 5:259613/149‑1 (MQ=255) cAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTaa < 5:263343/149‑1 (MQ=255) aaGGCGTTCAACGAAAAGATCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGTCCGGGGTTACCCAGGCCAACGATCAACTGGATTGCTGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGC‑CGCGCGCACTGTAAc < 6:154230/149‑1 (MQ=255) aaGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGC‑CGCGCGCACTGTAAc < 6:13015/149‑1 (MQ=255) ggCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAAccc > 1:34471/1‑149 (MQ=255) gTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGAt < 5:36623/149‑1 (MQ=255) aaCGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAAcc < 4:112244/141‑1 (MQ=255) aaCGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAAcc > 3:112244/1‑141 (MQ=255) aaCGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAAc > 3:57663/1‑149 (MQ=255) aaCGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAAc < 5:231920/149‑1 (MQ=255) aCGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACg > 3:193280/1‑149 (MQ=255) aaaGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCg < 4:9933/148‑1 (MQ=255) agagCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCg > 1:85748/1‑149 (MQ=255) cGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGa > 8:3808/1‑149 (MQ=255) aTGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTa < 2:85748/148‑1 (MQ=255) ccGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTc < 1:249738/148‑1 (MQ=255) ccGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTc < 7:3808/148‑1 (MQ=255) cGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCgg < 5:236024/149‑1 (MQ=255) tATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCcttctg > 7:143841/1‑149 (MQ=255) tATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCcttctg > 7:147745/1‑149 (MQ=255) ttCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCcttctgct > 1:244673/1‑149 (MQ=255) cGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCgg > 1:267941/1‑133 (MQ=255) cGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCgg < 2:267941/133‑1 (MQ=255) ggggCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCg < 6:179057/111‑1 (MQ=255) ggggCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCg > 5:179057/1‑111 (MQ=255) ggggCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCcttctgcttct > 8:134262/1‑149 (MQ=255) ggggCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCcttctgcttc < 2:244673/148‑1 (MQ=255) gCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGa < 2:34471/149‑1 (MQ=255) ccGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAg < 4:239993/149‑1 (MQ=255) cccAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTGCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCATCTGTAGCAACGAGTg > 8:119197/1‑149 (MQ=255) cccAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTg > 8:162851/1‑149 (MQ=255) ccAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAgc < 8:196821/122‑1 (MQ=255) ccAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAgc > 7:196821/1‑122 (MQ=255) ccAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTg > 1:258790/1‑148 (MQ=255) aGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCcttctg > 4:244804/1‑128 (MQ=255) aGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCcttctg < 3:244804/128‑1 (MQ=255) aaCTGGATGGCGGTCACGTCAGTGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTgg < 7:134262/149‑1 (MQ=255) aaCTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTgg > 7:155324/1‑149 (MQ=255) tGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGa < 4:57812/71‑1 (MQ=255) tGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGa > 3:57812/1‑71 (MQ=255) tGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCaa > 7:94028/1‑149 (MQ=255) tGGCGGTCACGTCAGGGGCTCTTCCTGTGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAg > 1:140085/1‑149 (MQ=255) gCGTTCACCTCATGGTCTCTTCCT‑TGGAGTTGTTGGGTTACATTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGATTGCTAGTGGATTACTCGTCAGTGTCTTCTGCTTCTGTAGCAACGCGTGGAGTGTGAACGTTGGTAATAGCt < 8:39853/148‑1 (MQ=255) tCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGtc < 8:143841/149‑1 (MQ=255) tCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGtc < 8:147745/149‑1 (MQ=255) gTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAAc < 8:218638/127‑1 (MQ=255) gTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAAc > 7:218638/1‑127 (MQ=255) gTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCCTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGtcatca > 5:34863/1‑149 (MQ=255) tCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCAc > 8:239747/1‑149 (MQ=255) ggCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTgg < 7:239747/149‑1 (MQ=255) ttCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGtcatc < 4:162971/137‑1 (MQ=255) ttCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGtcatc > 3:162971/1‑137 (MQ=255) ttCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGc > 8:240077/1‑146 (MQ=255) ttCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCag > 7:174759/1‑149 (MQ=255) cT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATGACCGTGGGCCAGAGc > 3:55667/1‑149 (MQ=255) cT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGc > 2:27077/1‑149 (MQ=255) gAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGc > 7:112138/1‑103 (MQ=255) gAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGc < 8:112138/103‑1 (MQ=255) gAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGcgac < 8:94028/148‑1 (MQ=255) ggtggGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCCTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGCGACGAAct < 6:34863/148‑1 (MQ=255) gtggGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGCGACGAActc > 6:253856/1‑148 (MQ=255) tggGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGAGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGCGACGAACTCTa > 1:138929/1‑149 (MQ=255) gggTTACAGTGC‑CGCGCGCACTGAAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGCGACGAACTCTAc > 7:167936/1‑149 (MQ=255) ggTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGCGACGAACTCTACg < 1:27077/149‑1 (MQ=255) gTTACAGTGC‑CGCGCGCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGaa < 2:55941/98‑1 (MQ=39) gTTACAGTGC‑CGCGCGCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGaa > 1:55941/1‑98 (MQ=39) aGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGCGACGAACTCTACGCCTTTc > 5:1706/1‑149 (MQ=255) gTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGCGACGAACTCTACGCCTTTCg > 2:109042/1‑149 (MQ=255) ccgcgc‑‑gCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTCGGCCAGAGCGACGAACTCTACGCCTTTCGGAg > 6:181464/2‑149 (MQ=255) cgcgcg‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGCGACGAACTCTACGCCTTTCGGAg < 8:155324/149‑1 (MQ=255) | GCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCT‑TGGAGTTGGTGGGTTACAGTGCGCGCG‑GCACTGTAACCCGATCAACGCCGGCGTGCGAGTGGATTACTCGGCAGCGCCTTCTGCTTCTGGAGCAACGCGTGGAGCGTGAACGTTGGCAACAGCTTTGTCATCACCGTGGGCCAGAGCGACGAACTCTACGCCTTTCGGAG > NC_002947/837856‑838150 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |