| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 336,124:1 | +T | 100% | coding (209/237 nt) | PP_0278 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 336,124 | 1 | . | T | 100.0% | 235.6 / NA | 69 | D70V (GAT→GTT) | PP_0278 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (34/35); total (34/35) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
TTAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAG > NC_002947/335977‑336264 | ttAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGCGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGACGA‑t > 7:176172/1‑149 (MQ=255)ttAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑t > 2:16446/1‑149 (MQ=255) aaCCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCCATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑tta > 1:163211/1‑147 (MQ=255) aCCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑ttac < 2:194734/149‑4 (MQ=255) ccATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑ttacct > 5:17179/1‑144 (MQ=255) aTCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑tgt > 1:165943/1‑149 (MQ=255) ccTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGc < 8:87752/148‑1 (MQ=255) cTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGc > 4:13838/1‑147 (MQ=255) cTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGc < 3:13838/147‑1 (MQ=255) cAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACa > 5:212543/1‑149 (MQ=255) aaTCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACAt < 6:44980/149‑1 (MQ=255) tcCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGc > 7:211142/1‑148 (MQ=255) cTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACGTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGc < 7:84686/146‑1 (MQ=255) cTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATgg < 2:62516/145‑1 (MQ=255) cTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGc < 8:211142/146‑1 (MQ=255) cgcgTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGgc > 1:37786/1‑149 (MQ=255) agCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCtgat > 6:236026/1‑148 (MQ=255) ccGGCGTCCCCGTCGTCGCGGCCTACGAGCATGTCTAGTTCCTGATGGGCTACATCAAGCACCTGGTGCGCGTTGGCGATATGGAGGACGACCATAAATTGCTGGGGGGATCCGATTACCATGTGCGACATGGCCAAGGCGCTGATGaa < 1:16446/149‑1 (MQ=255) ccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAAc < 3:54690/149‑1 (MQ=255) ccccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGAAATc > 4:181679/1‑148 (MQ=255) ccccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTAGGGGCAGCCGATTACC‑TGTGCGACATGACCAAGGCGCTGATGAACGATATc > 3:185477/1‑148 (MQ=255) cccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATc > 2:147532/1‑147 (MQ=255) cccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATc > 2:141381/1‑147 (MQ=255) cGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATg > 6:257687/1‑121 (MQ=255) cGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATg < 5:257687/121‑1 (MQ=255) aCGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGcc < 3:210158/149‑1 (MQ=255) gAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGAGATCGAGATCGCCAAGGGTACGgc > 8:122214/1‑149 (MQ=255) tctcGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAg < 1:141381/149‑1 (MQ=255) ctcGATCCTCATGGGCTACATCAACCACCTGCAGCGCGAGGGCGATATGGAGGACGAACATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAACGCCAAGGGTAAGGCGCATTAgg > 1:4691/1‑149 (MQ=255) gATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGACATCGCCAAGGGTAAGGCGCATTAGGCAt < 1:151669/149‑1 (MQ=255) ccTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATg < 2:155206/91‑1 (MQ=255) ccTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATg > 1:155206/1‑91 (MQ=255) gATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTACTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGAcgc > 2:98228/1‑149 (MQ=255) gggCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGt > 5:111281/1‑149 (MQ=255) cTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGgcg < 4:190337/127‑1 (MQ=255) cTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGgcg > 3:190337/1‑127 (MQ=255) cTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAt > 4:49483/1‑149 (MQ=255) tACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCtgatg < 1:141604/96‑1 (MQ=255) tACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCtgatg > 2:141604/1‑96 (MQ=255) aTCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTa < 2:197384/128‑1 (MQ=255) aTCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTa > 1:197384/1‑128 (MQ=255) tCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTAGGGGCAGCCGATTACC‑TGTGCGACATGACCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTtgtg < 4:185477/149‑1 (MQ=255) aaGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAgg < 4:154472/112‑1 (MQ=255) aaGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAgg < 4:151081/112‑1 (MQ=255) aaGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAgg > 3:151081/1‑112 (MQ=255) aaGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAgg > 3:154472/1‑112 (MQ=255) cTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGc < 2:165943/149‑1 (MQ=255) tGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAg < 4:131625/74‑1 (MQ=255) tGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAg > 3:131625/1‑74 (MQ=255) gCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGATATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGaa < 3:181679/149‑1 (MQ=255) cGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAt > 4:176119/1‑149 (MQ=255) cGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAt < 1:98228/149‑1 (MQ=255) atatGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATgg > 2:59769/1‑149 (MQ=255) tatGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATggg < 6:17179/149‑1 (MQ=255) tGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCt < 2:37786/149‑1 (MQ=255) gaggaCGACCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTTCGTCGCGCATGGGCTg > 2:40118/1‑148 (MQ=255) gacgacCATAAATTCCTGGGGGCAGCCGATTACC‑tgt > 8:192724/1‑37 (MQ=255) gacgacCATAAATTCCTGGGGGCAGCCGATTACC‑tgt < 7:192724/37‑1 (MQ=255) gacgacCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTa < 4:150008/85‑1 (MQ=255) gacgacCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTa > 3:150008/1‑85 (MQ=255) cgacCATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAagc < 6:212543/149‑1 (MQ=255) cATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGAcgcg < 4:128650/101‑1 (MQ=255) cATAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCCCCAAGGGTAAGGCGCATTAGGCATTGAcgcg > 3:128650/1‑101 (MQ=255) aTAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAt > 4:96491/1‑132 (MQ=255) aTAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAt < 3:96491/132‑1 (MQ=255) aTAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGccc < 3:176119/149‑1 (MQ=255) tAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCTTTGCAGccca > 6:123997/1‑148 (MQ=255) tAAATTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGcccc > 2:162731/1‑149 (MQ=255) aTTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTtgtg > 6:163152/1‑106 (MQ=255) aTTCCTGGGGGCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCTTTGCAGcccattc < 5:123997/149‑5 (MQ=39) ggggCAGCCGATTACC‑TGTGCGACATGTCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGAttt < 5:236026/147‑1 (MQ=255) ggggCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCa < 1:59769/149‑1 (MQ=255) gggCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGTTTTCag > 1:240446/1‑149 (MQ=255) gCAGCCGATTACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCagag < 1:147532/149‑1 (MQ=255) | TTAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TACC‑TGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAG > NC_002947/335977‑336264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |