Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 344,045:1 +T 9.8% intergenic (+134/+55) PP_5440 → / ← PP_t72 hypothetical protein/tRNA‑Phe

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947344,0451.T 9.8% 221.6 / 20.8 61intergenic (+134/+55)PP_5440/PP_t72hypothetical protein/tRNA‑Phe
Reads supporting (aligned to +/- strand):  ref base . (27/28);  new base T (4/2);  total (31/30)
Fisher's exact test for biased strand distribution p-value = 6.71e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.96e-01

TCGGACGAGTAAGGTTTGGCCCGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTATCTGGGCGACGAGGTG  >  NC_002947/343900‑344184
                                                                                                                                                   |                                                                                                                                           
tCGGACGAGTAAGGTTTGGCCCGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCg                                                                                                                                          <  6:184731/149‑1 (MQ=255)
        gTAAGGTTTGGCCCGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAGAAACCCGCCTAGTGCGGGtttttt                                                                                                                                  >  3:136825/1‑149 (MQ=255)
        gTAAGGTTTGGCCCGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCtt                                                                                                                                  <  5:249808/149‑1 (MQ=255)
         tAAGGTTTGGCCCGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAGAAACCCGCCTAGTGCGGGTTTTttg                                                                                                                                 >  7:212655/1‑149 (MQ=255)
         tAAGGTTTGGCCCGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCttg                                                                                                                                 >  1:191030/1‑149 (MQ=255)
         tAAGGTTTGGCCCGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCttg                                                                                                                                 >  5:71907/1‑149 (MQ=255)
          aaGGTTTGGCCCGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTTCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAGAAACCCGCCTAGTGCGGGTTTTttg                                                                                                                                 <  4:136825/148‑1 (MQ=255)
           aGGTTTGGCCCGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAGAAACCCGCCTAGTGCGGGTTTTttgtt                                                                                                                               <  8:212655/149‑1 (MQ=39)
                   cccGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTc                                                                                                                       <  1:89299/149‑1 (MQ=255)
                    ccGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGTCGGGTTTCTTGTTGTCGCTTCg                                                                                                                      >  8:187877/1‑149 (MQ=255)
                    ccGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCg                                                                                                                      >  5:14505/1‑149 (MQ=255)
                                                tcGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTg                                                                                           >  8:8669/1‑148 (MQ=255)
                                                  gATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAg                                                                                        >  8:217455/1‑149 (MQ=255)
                                                  gATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAg                                                                                        >  8:221190/1‑149 (MQ=255)
                                                      gCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAggtg                                                                                     <  5:261925/148‑1 (MQ=255)
                                                        aTGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGgtggtg                                                                                  >  1:36335/1‑149 (MQ=255)
                                                               gCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCaga                                                                            <  7:217455/148‑1 (MQ=255)
                                                               gCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCaga                                                                            <  7:221190/148‑1 (MQ=255)
                                                                ccTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAgaga                                                                          <  6:28267/149‑1 (MQ=255)
                                                                ccTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAgaga                                                                          >  7:62154/1‑149 (MQ=255)
                                                                  ttCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACg                                                                        >  1:238369/1‑149 (MQ=255)
                                                                    cAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACg                                                                        >  3:189449/1‑147 (MQ=255)
                                                                      ggTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACATACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGt                                                                    <  2:191030/149‑1 (MQ=255)
                                                                      ggTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGt                                                                    <  7:116722/149‑1 (MQ=255)
                                                                       gTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGcc                                                                                <  8:205082/136‑1 (MQ=255)
                                                                       gTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGcc                                                                                >  7:205082/1‑136 (MQ=255)
                                                                           cGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAAc                                                               >  2:9041/1‑149 (MQ=255)
                                                                                tgAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAAccgcc                                                           >  7:212894/1‑148 (MQ=255)
                                                                                 gAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCaga                                                                            <  4:174871/130‑1 (MQ=255)
                                                                                 gAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCaga                                                                            >  3:174871/1‑130 (MQ=255)
                                                                                     tctcGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCAAGAGACGGAGTCGAACCGCCGacac                                                      >  7:215216/1‑148 (MQ=255)
                                                                                          tgtTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGAt                                                <  8:212894/149‑1 (MQ=255)
                                                                                             tcttcGACGCCGCCTGAAGTTAAAAATCACAGACAATCAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGAttt                                              >  1:180528/1‑149 (MQ=255)
                                                                                              cttcGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGt                                                                                                                   <  2:218525/78‑1 (MQ=255)
                                                                                              cttcGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGAtttt                                             <  7:8669/148‑1 (MQ=255)
                                                                                              cttcGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGAtttt                                             <  6:14505/148‑1 (MQ=255)
                                                                                                tcGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGcc                                                                                >  6:180615/1‑111 (MQ=255)
                                                                                                tcGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGcc                                                                                <  5:180615/111‑1 (MQ=255)
                                                                                                 cGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCaa                                          <  1:9041/148‑1 (MQ=255)
                                                                                                 cGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCa                                           <  6:71907/147‑1 (MQ=255)
                                                                                                     gccgccTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGa                                                                      >  8:44834/1‑116 (MQ=255)
                                                                                                     gccgccTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGa                                                                      <  7:44834/116‑1 (MQ=255)
                                                                                                       cgccTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTGAAAATCctcgt                                   <  8:62154/149‑3 (MQ=255)
                                                                                                       cgccTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTGAAAATCctc                                     <  6:184467/147‑1 (MQ=255)
                                                                                                       cgccTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTGAAAATCctc                                     >  5:184467/1‑147 (MQ=255)
                                                                                                            gAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTa                              >  5:131050/1‑149 (MQ=255)
                                                                                                             aaGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTAc                             <  2:238369/149‑1 (MQ=255)
                                                                                                             aaGTTAAAAATCACAGACAACAAAAAACACTCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTa                              <  7:187877/148‑1 (MQ=255)
                                                                                                                  aaaaaTCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACt                        >  1:250893/1‑149 (MQ=255)
                                                                                                                              caacaaAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGTTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTATCTggg            <  2:250893/149‑1 (MQ=255)
                                                                                                                              caacaaAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTATCTggg            <  2:180528/149‑1 (MQ=255)
                                                                                                                               aacaaAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTATCTGGGc           >  8:220207/1‑149 (MQ=255)
                                                                                                                                  caaAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTg                       <  1:231712/135‑1 (MQ=255)
                                                                                                                                  caaAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTg                       >  2:231712/1‑135 (MQ=255)
                                                                                                                                   aagaaaCCCGCCTAGTGCGGGTTTTTTGTTGTCGCTTCGGGTAACTTTGCAACCACGAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTATCTGGGcgac        >  2:209311/4‑149 (MQ=255)
                                                                                                                                   aagaaaCCCGCCTAGTGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACAACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTACAATCCTCTGATCTACCGACTGAGCTATCTGGGcgac        >  6:76130/4‑149 (MQ=255)
                                                                                                                                    aaaaaCCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTATCTGGGcgacg       <  2:36335/149‑1 (MQ=255)
                                                                                                                                          ccGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCTCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTATCTGGGCGACGAGGTg  >  5:12312/1‑148 (MQ=255)
                                                                                                                                          ccGCACTAGGCGCGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTATCTGGGCGACGAGGTg  >  7:208431/1‑148 (MQ=255)
                                                                                                                                                tAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTAt                 <  7:4115/127‑1 (MQ=255)
                                                                                                                                                tAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTAt                 >  8:4115/1‑127 (MQ=255)
                                                                                                                                                   |                                                                                                                                           
TCGGACGAGTAAGGTTTGGCCCGCAGTCTGCTCATGGCTGCGGGTTTCTCGATTGCATGGCTAGCCTTCAGGTTGCGTTGTGAGGTCTCGTGTTCTTCGACGCCGCCTGAAGTTAAAAATCACAGACAACAAAAAACCCGCACTAGGCGGGTTTCTTGTTGTCGCTTCGGGTAACTTTGCAACCACCAGAAGCTTGAAGGTGGTGCCCAGAGACGGAGTCGAACCGCCGACACGAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTATCTGGGCGACGAGGTG  >  NC_002947/343900‑344184

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: