New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 274817 = | 56 (1.330) | 3 (0.070) | 3/252 | NT | 5.2% | coding (1131/1386 nt) | PP_0222 | DszA family monooxygenase |
? | NC_002947 | 274850 = | 55 (1.330) | coding (1098/1386 nt) | PP_0222 | DszA family monooxygenase |
ATTGCCTTCAACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTG‑GCCGAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/274963‑274817 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGAT > NC_002947/274850‑274996 ATTGCCTTCAACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGAGCCTGAACAGGTG‑GCCGAGCAGat > 5:202150/1‑147 ccACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTGGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGCTCGGC‑CACCTGTTCAGGCGCGCCGACCAGGGTTACGTA < 6:3875/146‑1 AACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTG‑GCCGAGCA < 4:171539/137‑1 AACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTTGCAAGACAACGCCTGGACACGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTG‑GCCGAGCA > 3:171539/1‑137 CCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTG‑GCCGAGCAG < 7:166134/79‑1 CCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTG‑GCCGAGCAG > 8:166134/1‑79 CCTGGTCGGCGCGCCTGAACAGGTG‑GCCGAGCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGG < 3:17283/84‑1 CCTGGTCGGCGCGCCTGAACAGGTG‑GCCGAGCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGG > 4:17283/1‑84 AGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGAT < 2:223130/149‑1 ATTGCCTTCAACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTG‑GCCGAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/274963‑274817 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGAT > NC_002947/274850‑274996 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |