New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 274817 =56 (1.330)3 (0.070) 3/252 NT 5.2% coding (1131/1386 nt) PP_0222 DszA family monooxygenase
?NC_002947 274850 = 55 (1.330)coding (1098/1386 nt) PP_0222 DszA family monooxygenase

ATTGCCTTCAACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTGGCCGAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/274963‑274817
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGAT  >  NC_002947/274850‑274996
                                                                                                                                                                                                                                                                                                       
ATTGCCTTCAACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGAGCCTGAACAGGTGGCCGAGCAGat                                                                                                                                                   >  5:202150/1‑147
        ccACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTGGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTA                                                                                                                                            <  6:3875/146‑1
         AACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTGGCCGAGCA                                                                                                                                                      <  4:171539/137‑1
         AACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTTGCAAGACAACGCCTGGACACGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTGGCCGAGCA                                                                                                                                                      >  3:171539/1‑137
                                                                    CCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTGGCCGAGCAG                                                                                                                                                     <  7:166134/79‑1
                                                                    CCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTGGCCGAGCAG                                                                                                                                                     >  8:166134/1‑79
                                                                                                                 CCTGGTCGGCGCGCCTGAACAGGTGGCCGAGCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGG                                                                                                   <  3:17283/84‑1
                                                                                                                 CCTGGTCGGCGCGCCTGAACAGGTGGCCGAGCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGG                                                                                                   >  4:17283/1‑84
                                                                                                                                                  AGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGAT  <  2:223130/149‑1
                                                                                                                                                                                                                                                                                                       
ATTGCCTTCAACCAGGGCAACGCCATCCAGTCAGCCACGCGCCAGTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTGGCCGAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/274963‑274817
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGAT  >  NC_002947/274850‑274996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.