New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 276776 = | 51 (1.210) | 4 (0.100) | 3/244 | NT | 7.8% | coding (392/1221 nt) | PP_0223 | DszC family monooxygenase |
? | NC_002947 | 276836 = | 46 (1.150) | coding (332/1221 nt) | PP_0223 | DszC family monooxygenase |
ACCCTGGCCAAGGTCATCGCCCGTATCGCGCAGGCCGACGGTTCGCTCGGGCAGATTCCGCAGAATCATTTCTACGGTCTGGAAGTGCTGCGGGTAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/276930‑276776 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtttACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGACCTTGGCCAGGGTGACGTTGGACACGCCGGCACCGCCGAAGGCTTTGGGCACGCTGATGGCCCA > NC_002947/276836‑276981 ACCCTGGCCAAGGTCATCGCCCGTATCGCGCAGGCCGACGGTTCGCTCGGGCAGATTCCGCAGAATCATTTCTACGGTCTGGAAGTGCTGCGGGTAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCG < 3:153030/149‑1 CTGGCCAAGGTCATCGCCCGTATCGCGCAGGCCGACGGTTCGCTCGGGCAGATTCCGCAGAATCATTTCTACGGTCTGGAAGTGCTGCGGGTAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCG < 8:106673/149‑1 GTAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCGTTTACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGACCTTG > 2:62178/1‑149 GTAAACGGCAGCCACGAACAGCAACAGCGCCGGTACGACGAGGTGCTGGCCGGCCGCCGTTTACCCGCAGCACTTACAGACCGTAGAAATGATTCTGAGGAATCTGCACTAGAGAAACGTCGGCCTGAGCGATACGGGCGATGACaatg > 5:168487/1‑145 GCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCGTTTACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGACCTTGGCCAGGG > 5:99658/1‑149 AGCCCCGAACATCAACAGCGACTGTACTACGAGGTGCTGGCCGGCCGCCGTTTACCCGCTGCACTTCCAGACCGTAGAAATGATTCTGCGGAATATGCCAGAGCGAACCTTCTGCCTGCGCGATACGGGCGATGACCTTGGCCAGGGTG < 6:168487/149‑1 TTTACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGACCTTGGCCAGGGTGACGTTGGACACGCCGTCACCGCCGAAGGCTTTGGGCACGCTGATGGCCCA < 7:160166/149‑1 ACCCTGGCCAAGGTCATCGCCCGTATCGCGCAGGCCGACGGTTCGCTCGGGCAGATTCCGCAGAATCATTTCTACGGTCTGGAAGTGCTGCGGGTAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/276930‑276776 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtttACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGACCTTGGCCAGGGTGACGTTGGACACGCCGGCACCGCCGAAGGCTTTGGGCACGCTGATGGCCCA > NC_002947/276836‑276981 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |